RNA–Protein interactions for RNA: ENST00000616511.4

RCAN3-209, Transcript of RCAN family member 3, humanhuman

TSL 1 (best) BASIC

Gene RCAN3, Length 2,527 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCAN3-209ENST00000616511 NISCHQ9Y2I1 1504 aa39.34■■■■□ 3.89
RCAN3-209ENST00000616511 CCDC180Q9P1Z9 1646 aa33.88■■■■□ 3.01
RCAN3-209ENST00000616511 ZCCHC6Q5VYS8 1495 aaKnown RBP33.12■■■□□ 2.89
RCAN3-209ENST00000616511 SHROOM4Q9ULL8 1493 aa32.94■■■□□ 2.86
RCAN3-209ENST00000616511 DCAF8L2P0C7V8 631 aa32.84■■■□□ 2.85
RCAN3-209ENST00000616511 DCAF1Q9Y4B6 1507 aa32.23■■■□□ 2.75
RCAN3-209ENST00000616511 ABCC9O60706 1549 aa32.19■■■□□ 2.74
RCAN3-209ENST00000616511 SUPT5HO00267 1087 aaKnown RBP31.81■■■□□ 2.68
RCAN3-209ENST00000616511 SCRIBQ14160 1630 aa31.66■■■□□ 2.66
RCAN3-209ENST00000616511 MYO15BQ96JP2 1530 aa31.62■■■□□ 2.65
RCAN3-209ENST00000616511 NACADO15069 1562 aa31.49■■■□□ 2.63
RCAN3-209ENST00000616511 RB1CC1Q8TDY2 1594 aa31.19■■■□□ 2.58
RCAN3-209ENST00000616511 UNC13AQ9UPW8 1703 aa30.85■■■□□ 2.53
RCAN3-209ENST00000616511 CECR2Q9BXF3 1484 aa30.81■■■□□ 2.52
RCAN3-209ENST00000616511 RSF1Q96T23 1441 aaPredicted RBP30.79■■■□□ 2.52
RCAN3-209ENST00000616511 MROH2BQ7Z745 1585 aa30.6■■■□□ 2.49
RCAN3-209ENST00000616511 PABPN1Q86U42 306 aaKnown RBP eCLIP30.58■■■□□ 2.49
RCAN3-209ENST00000616511 CHIC1Q5VXU3 224 aa30.48■■■□□ 2.47
RCAN3-209ENST00000616511 BICRAQ9NZM4 1560 aa30.46■■■□□ 2.47
RCAN3-209ENST00000616511 WIZO95785 1651 aa30.41■■■□□ 2.46
RCAN3-209ENST00000616511 BAZ1AQ9NRL2 1556 aaPredicted RBP30.27■■■□□ 2.44
RCAN3-209ENST00000616511 SMARCA4P51532 1647 aa30.18■■■□□ 2.42
RCAN3-209ENST00000616511 TOP2AP11388 1531 aaKnown RBP29.85■■■□□ 2.37
RCAN3-209ENST00000616511 CCDC88BA6NC98 1476 aa29.71■■■□□ 2.35
RCAN3-209ENST00000616511 SMARCA2P51531 1590 aa29.7■■■□□ 2.34
RCAN3-209ENST00000616511 TRIM41Q8WV44 630 aa29.64■■■□□ 2.34
RCAN3-209ENST00000616511 PEG3Q9GZU2 1588 aa29.62■■■□□ 2.33
RCAN3-209ENST00000616511 EIF4G1Q04637 1599 aaKnown RBP29.6■■■□□ 2.33
RCAN3-209ENST00000616511 ATAD2BQ9ULI0 1458 aa29.6■■■□□ 2.33
RCAN3-209ENST00000616511 LOC105371045A0A1W2PR82 267 aa29.6■■■□□ 2.33
RCAN3-209ENST00000616511 FAM9AQ8IZU1 332 aaPredicted RBP29.45■■■□□ 2.31
RCAN3-209ENST00000616511 BAZ1BQ9UIG0 1483 aaKnown RBP29.45■■■□□ 2.3
RCAN3-209ENST00000616511 ABCC8Q09428 1581 aa29.41■■■□□ 2.3
RCAN3-209ENST00000616511 EHMT2Q96KQ7 1210 aa29.28■■■□□ 2.28
RCAN3-209ENST00000616511 NCAPD3P42695 1498 aa29.14■■■□□ 2.26
RCAN3-209ENST00000616511 HMGXB3Q12766 1538 aa29.08■■■□□ 2.25
RCAN3-209ENST00000616511 CC2D2AQ9P2K1 1620 aa28.99■■■□□ 2.23
RCAN3-209ENST00000616511 WRNQ14191 1432 aaPredicted RBP eCLIP28.92■■■□□ 2.22
RCAN3-209ENST00000616511 SOGA1O94964 1423 aa28.91■■■□□ 2.22
RCAN3-209ENST00000616511 SYNJ1O43426 1573 aa28.91■■■□□ 2.22
RCAN3-209ENST00000616511 RUSC2Q8N2Y8 1516 aa28.86■■■□□ 2.21
RCAN3-209ENST00000616511 CFTRP13569 1480 aa28.68■■■□□ 2.18
RCAN3-209ENST00000616511 DNAJC5BQ9UF47 199 aa28.62■■■□□ 2.17
RCAN3-209ENST00000616511 PCGF6Q9BYE7 350 aa28.61■■■□□ 2.17
RCAN3-209ENST00000616511 TOP2BQ02880 1626 aa28.57■■■□□ 2.16
RCAN3-209ENST00000616511 CSRNP3Q8WYN3 585 aa28.56■■■□□ 2.16
RCAN3-209ENST00000616511 CUX1P39880 1505 aa28.53■■■□□ 2.16
RCAN3-209ENST00000616511 CADPSQ9ULU8 1353 aa28.52■■■□□ 2.16
RCAN3-209ENST00000616511 BIVM-ERCC5R4GMW8 1640 aa28.5■■■□□ 2.15
RCAN3-209ENST00000616511 PRDM2Q13029 1718 aa28.45■■■□□ 2.15
RCAN3-209ENST00000616511 NESP48681 1621 aa28.45■■■□□ 2.14
RCAN3-209ENST00000616511 EEA1Q15075 1411 aa28.45■■■□□ 2.14
RCAN3-209ENST00000616511 HRCP23327 699 aa28.42■■■□□ 2.14
RCAN3-209ENST00000616511 UBTFP17480 764 aaKnown RBP28.36■■■□□ 2.13
RCAN3-209ENST00000616511 PPARGC1BQ86YN6 1023 aaKnown RBP28.36■■■□□ 2.13
RCAN3-209ENST00000616511 CEP162Q5TB80 1403 aa28.3■■■□□ 2.12
RCAN3-209ENST00000616511 GOLGA3Q08378 1498 aa28.28■■■□□ 2.12
RCAN3-209ENST00000616511 FANCD2Q9BXW9 1451 aa28.27■■■□□ 2.12
RCAN3-209ENST00000616511 TNIKQ9UKE5 1360 aa28.26■■■□□ 2.11
RCAN3-209ENST00000616511 RAPGEF2Q9Y4G8 1499 aa28.24■■■□□ 2.11
RCAN3-209ENST00000616511 CEP164Q9UPV0 1460 aa28.21■■■□□ 2.11
RCAN3-209ENST00000616511 KIF21BO75037 1637 aa28.21■■■□□ 2.11
RCAN3-209ENST00000616511 TRIM26Q12899 539 aaPredicted RBP28.18■■■□□ 2.1
RCAN3-209ENST00000616511 RANGAP1P46060 587 aaPredicted RBP28.15■■■□□ 2.1
RCAN3-209ENST00000616511 FGD5Q6ZNL6 1462 aa28.14■■■□□ 2.1
RCAN3-209ENST00000616511 TTBK1Q5TCY1 1321 aaPredicted RBP28.08■■■□□ 2.09
RCAN3-209ENST00000616511 KIF27Q86VH2 1401 aa28.07■■■□□ 2.08
RCAN3-209ENST00000616511 CUX2O14529 1486 aa28.06■■■□□ 2.08
RCAN3-209ENST00000616511 LAMC3Q9Y6N6 1575 aa28.05■■■□□ 2.08
RCAN3-209ENST00000616511 PRXQ9BXM0 1461 aa28.03■■■□□ 2.08
RCAN3-209ENST00000616511 RAD54L2Q9Y4B4 1467 aa28■■■□□ 2.07
RCAN3-209ENST00000616511 TOPBP1Q92547 1522 aa28■■■□□ 2.07
RCAN3-209ENST00000616511 DNMBPQ6XZF7 1577 aa27.98■■■□□ 2.07
RCAN3-209ENST00000616511 KIF21AQ7Z4S6 1674 aa27.96■■■□□ 2.07
RCAN3-209ENST00000616511 URB2Q14146 1524 aaKnown RBP27.96■■■□□ 2.07
RCAN3-209ENST00000616511 CLIP1P30622 1438 aa27.95■■■□□ 2.06
RCAN3-209ENST00000616511 POLA1P09884 1462 aaPredicted RBP27.94■■■□□ 2.06
RCAN3-209ENST00000616511 ERICH3Q5RHP9 1530 aa27.89■■■□□ 2.06
RCAN3-209ENST00000616511 IGF1RP08069 1367 aa27.89■■■□□ 2.06
RCAN3-209ENST00000616511 PDS5BQ9NTI5 1447 aa27.85■■■□□ 2.05
RCAN3-209ENST00000616511 ABCA10Q8WWZ4 1543 aa27.76■■■□□ 2.03
RCAN3-209ENST00000616511 CARMIL1Q5VZK9 1371 aa27.74■■■□□ 2.03
RCAN3-209ENST00000616511 TDRD9Q8NDG6 1382 aaKnown RBP27.7■■■□□ 2.02
RCAN3-209ENST00000616511 VPS8Q8N3P4 1428 aa27.7■■■□□ 2.02
RCAN3-209ENST00000616511 ARAP1Q96P48 1450 aa27.67■■■□□ 2.02
RCAN3-209ENST00000616511 WDR97A6NE52 1622 aa27.67■■■□□ 2.02
RCAN3-209ENST00000616511 ARHGAP35Q9NRY4 1499 aa27.58■■■□□ 2.01
RCAN3-209ENST00000616511 ABCA5Q8WWZ7 1642 aa27.54■■■□□ 2
RCAN3-209ENST00000616511 TARBP1Q13395 1621 aaKnown RBP27.54■■■□□ 2
RCAN3-209ENST00000616511 MRC2Q9UBG0 1479 aa27.53■■■□□ 2
RCAN3-209ENST00000616511 GAPVD1Q14C86 1478 aa27.5■■□□□ 1.99
RCAN3-209ENST00000616511 P3H3Q8IVL6 736 aa27.45■■□□□ 1.99
RCAN3-209ENST00000616511 CUL7Q14999 1698 aa27.44■■□□□ 1.98
RCAN3-209ENST00000616511 AQRO60306 1485 aaKnown RBP eCLIP27.44■■□□□ 1.98
RCAN3-209ENST00000616511 APLP2Q06481 763 aa27.42■■□□□ 1.98
RCAN3-209ENST00000616511 ERCC6Q03468 1493 aa27.4■■□□□ 1.98
RCAN3-209ENST00000616511 KANK4Q5T7N3 995 aaPredicted RBP27.4■■□□□ 1.98
RCAN3-209ENST00000616511 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.38■■□□□ 1.97
RCAN3-209ENST00000616511 ZNF608Q9ULD9 1512 aaPredicted RBP27.37■■□□□ 1.97
RCAN3-209ENST00000616511 WDR62O43379 1518 aa27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms