RNA–Protein interactions for RNA: ENST00000616193.1

AC140725.3-201, humanhuman

BASIC

Gene AC140725.3, Length 880 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC140725.3-201ENST00000616193 AEBP2Q6ZN18 517 aaPredicted RBP31.31■■■□□ 2.6
AC140725.3-201ENST00000616193 CHIC1Q5VXU3 224 aa30.22■■■□□ 2.43
AC140725.3-201ENST00000616193 SENP3Q9H4L4 574 aaPredicted RBP26.67■■□□□ 1.86
AC140725.3-201ENST00000616193 PHF23Q9BUL5 403 aaPredicted RBP26.5■■□□□ 1.83
AC140725.3-201ENST00000616193 FOXD1Q16676 465 aa24.77■■□□□ 1.56
AC140725.3-201ENST00000616193 PLPPR3Q6T4P5 718 aa24.38■■□□□ 1.49
AC140725.3-201ENST00000616193 PPP6R1Q9UPN7 881 aa23.51■■□□□ 1.35
AC140725.3-201ENST00000616193 ADRA2BP18089 450 aa23.45■■□□□ 1.34
AC140725.3-201ENST00000616193 PIAS4Q8N2W9 510 aaPredicted RBP23.26■■□□□ 1.31
AC140725.3-201ENST00000616193 MSH5O43196 834 aa23.04■■□□□ 1.28
AC140725.3-201ENST00000616193 POTEDQ86YR6 584 aa21.63■■□□□ 1.05
AC140725.3-201ENST00000616193 SCAF1Q9H7N4 1312 aaKnown RBP21.54■■□□□ 1.04
AC140725.3-201ENST00000616193 PPP4R3CPQ6ZMV5 832 aa21.41■■□□□ 1.02
AC140725.3-201ENST00000616193 MAPK8IP2Q13387 824 aaPredicted RBP21.39■■□□□ 1.01
AC140725.3-201ENST00000616193 DMRT2Q9Y5R5 561 aa21.22■□□□□ 0.99
AC140725.3-201ENST00000616193 CNKSR2Q8WXI2 1034 aa20.92■□□□□ 0.94
AC140725.3-201ENST00000616193 NCBP3Q53F19 620 aaKnown RBP20.76■□□□□ 0.91
AC140725.3-201ENST00000616193 HOXD11P31277 338 aaPredicted RBP20.64■□□□□ 0.89
AC140725.3-201ENST00000616193 RNF216Q9NWF9 866 aaPredicted RBP20.61■□□□□ 0.89
AC140725.3-201ENST00000616193 KCNA4P22459 653 aa20.44■□□□□ 0.86
AC140725.3-201ENST00000616193 NPM3O75607 178 aaKnown RBP20.43■□□□□ 0.86
AC140725.3-201ENST00000616193 DCAF8L1A6NGE4 600 aa20.28■□□□□ 0.84
AC140725.3-201ENST00000616193 DNAJC5BQ9UF47 199 aa19.97■□□□□ 0.79
AC140725.3-201ENST00000616193 RNF39Q9H2S5 420 aa19.68■□□□□ 0.74
AC140725.3-201ENST00000616193 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.64■□□□□ 0.73
AC140725.3-201ENST00000616193 CACNB1Q02641 598 aaPredicted RBP19.45■□□□□ 0.7
AC140725.3-201ENST00000616193 C1QBPQ07021 282 aaKnown RBP19.44■□□□□ 0.7
AC140725.3-201ENST00000616193 SLC4A1APQ9BWU0 796 aaKnown RBP19.41■□□□□ 0.7
AC140725.3-201ENST00000616193 SLC4A2P04920 1241 aa19.38■□□□□ 0.69
AC140725.3-201ENST00000616193 U3KPZ7 1027 aaPredicted RBP19.27■□□□□ 0.68
AC140725.3-201ENST00000616193 FOXD4L1Q9NU39 408 aa18.96■□□□□ 0.63
AC140725.3-201ENST00000616193 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.95■□□□□ 0.62
AC140725.3-201ENST00000616193 HNRNPUL2Q1KMD3 747 aaKnown RBP18.95■□□□□ 0.62
AC140725.3-201ENST00000616193 MYCNP04198 464 aaPredicted RBP18.91■□□□□ 0.62
AC140725.3-201ENST00000616193 APLP2Q06481 763 aa18.85■□□□□ 0.61
AC140725.3-201ENST00000616193 SAMD1Q6SPF0 538 aaPredicted RBP18.85■□□□□ 0.61
AC140725.3-201ENST00000616193 SPINK5Q9NQ38 1064 aaPredicted RBP18.83■□□□□ 0.6
AC140725.3-201ENST00000616193 ZBTB22O15209 634 aa18.79■□□□□ 0.6
AC140725.3-201ENST00000616193 CAPN15O75808 1086 aa18.79■□□□□ 0.6
AC140725.3-201ENST00000616193 ZNF219Q9P2Y4 722 aaPredicted RBP18.63■□□□□ 0.57
AC140725.3-201ENST00000616193 TRHP20396 242 aaPredicted RBP18.6■□□□□ 0.57
AC140725.3-201ENST00000616193 DSG3P32926 999 aa18.59■□□□□ 0.57
AC140725.3-201ENST00000616193 ABCB7O75027 752 aa18.38■□□□□ 0.53
AC140725.3-201ENST00000616193 ATF5Q9Y2D1 282 aaPredicted RBP18.38■□□□□ 0.53
AC140725.3-201ENST00000616193 ATXN8OSP0DMR3 200 aa18.37■□□□□ 0.53
AC140725.3-201ENST00000616193 CSRNP3Q8WYN3 585 aa18.37■□□□□ 0.53
AC140725.3-201ENST00000616193 EHMT2Q96KQ7 1210 aa18.36■□□□□ 0.53
AC140725.3-201ENST00000616193 POLA2Q14181 598 aa18.22■□□□□ 0.51
AC140725.3-201ENST00000616193 ZBTB12Q9Y330 459 aaPredicted RBP17.95■□□□□ 0.46
AC140725.3-201ENST00000616193 RBM42Q9BTD8 480 aaKnown RBP17.76■□□□□ 0.43
AC140725.3-201ENST00000616193 FBLN2P98095 1184 aa17.69■□□□□ 0.42
AC140725.3-201ENST00000616193 OSCARQ8IYS5 282 aa17.61■□□□□ 0.41
AC140725.3-201ENST00000616193 MKRN4PQ13434 485 aaPredicted RBP17.58■□□□□ 0.4
AC140725.3-201ENST00000616193 AKT1S1Q96B36 256 aa17.44■□□□□ 0.38
AC140725.3-201ENST00000616193 SPDYE2BA6NHP3 402 aa17.41■□□□□ 0.38
AC140725.3-201ENST00000616193 SPDYE6P0CI01 402 aa17.41■□□□□ 0.38
AC140725.3-201ENST00000616193 SPDYE2Q495Y8 402 aa17.41■□□□□ 0.38
AC140725.3-201ENST00000616193 ZNF692Q9BU19 519 aaPredicted RBP17.26■□□□□ 0.35
AC140725.3-201ENST00000616193 REM2Q8IYK8 340 aaPredicted RBP17.25■□□□□ 0.35
AC140725.3-201ENST00000616193 SSUH2Q9Y2M2 353 aa17.23■□□□□ 0.35
AC140725.3-201ENST00000616193 CHRDL2Q6WN34 429 aa17.14■□□□□ 0.33
AC140725.3-201ENST00000616193 POTEHQ6S545 545 aa17.06■□□□□ 0.32
AC140725.3-201ENST00000616193 PITPNM1O00562 1244 aa17.05■□□□□ 0.32
AC140725.3-201ENST00000616193 SPDYE4A6NLX3 237 aa17.01■□□□□ 0.31
AC140725.3-201ENST00000616193 PABPN1Q86U42 306 aaKnown RBP eCLIP17.01■□□□□ 0.31
AC140725.3-201ENST00000616193 SPDYE1Q8NFV5 336 aaPredicted RBP16.99■□□□□ 0.31
AC140725.3-201ENST00000616193 CLEC11AQ9Y240 323 aa16.89■□□□□ 0.29
AC140725.3-201ENST00000616193 FXR2P51116 673 aaKnown RBP eCLIP16.84■□□□□ 0.29
AC140725.3-201ENST00000616193 PIP4P2Q8N4L2 257 aa16.83■□□□□ 0.28
AC140725.3-201ENST00000616193 PRR29P0C7W0 189 aa16.71■□□□□ 0.27
AC140725.3-201ENST00000616193 PROM2Q8N271 834 aa16.7■□□□□ 0.26
AC140725.3-201ENST00000616193 STAG3Q9UJ98 1225 aa16.69■□□□□ 0.26
AC140725.3-201ENST00000616193 FKBP8Q14318 412 aa16.63■□□□□ 0.25
AC140725.3-201ENST00000616193 PRKAR2AP13861 404 aaKnown RBP16.62■□□□□ 0.25
AC140725.3-201ENST00000616193 CHADLQ6NUI6 762 aa16.51■□□□□ 0.23
AC140725.3-201ENST00000616193 HAX1O00165 279 aa16.4■□□□□ 0.22
AC140725.3-201ENST00000616193 CREBZFQ9NS37 354 aa16.4■□□□□ 0.22
AC140725.3-201ENST00000616193 FARP1Q9Y4F1 1045 aaPredicted RBP16.35■□□□□ 0.21
AC140725.3-201ENST00000616193 C19orf67A6NJJ6 358 aa16.27■□□□□ 0.2
AC140725.3-201ENST00000616193 SP7Q8TDD2 431 aaPredicted RBP16.22■□□□□ 0.19
AC140725.3-201ENST00000616193 EVX2Q03828 476 aa16.2■□□□□ 0.18
AC140725.3-201ENST00000616193 FBXO3Q9UK99 471 aa16.2■□□□□ 0.18
AC140725.3-201ENST00000616193 MNX1P50219 401 aaPredicted RBP16.18■□□□□ 0.18
AC140725.3-201ENST00000616193 MIER1Q8N108 512 aa16.16■□□□□ 0.18
AC140725.3-201ENST00000616193 PLEKHG5O94827 1062 aa16.15■□□□□ 0.18
AC140725.3-201ENST00000616193 NPM1P06748 294 aaKnown RBP eCLIP16.15■□□□□ 0.18
AC140725.3-201ENST00000616193 CD44P16070 742 aaKnown RBP16.13■□□□□ 0.17
AC140725.3-201ENST00000616193 PLCD3Q8N3E9 789 aa16.1■□□□□ 0.17
AC140725.3-201ENST00000616193 ZBTB47Q9UFB7 747 aaPredicted RBP15.99■□□□□ 0.15
AC140725.3-201ENST00000616193 PAK3O75914 559 aaPredicted RBP15.97■□□□□ 0.15
AC140725.3-201ENST00000616193 ZRANB1Q9UGI0 708 aa15.97■□□□□ 0.15
AC140725.3-201ENST00000616193 VASPP50552 380 aaPredicted RBP15.96■□□□□ 0.15
AC140725.3-201ENST00000616193 ZNF579Q8NAF0 562 aaKnown RBP15.92■□□□□ 0.14
AC140725.3-201ENST00000616193 GABBR2O75899 941 aa15.9■□□□□ 0.14
AC140725.3-201ENST00000616193 CLCN6P51797 869 aa15.89■□□□□ 0.13
AC140725.3-201ENST00000616193 TSPYL2Q9H2G4 693 aaPredicted RBP15.82■□□□□ 0.12
AC140725.3-201ENST00000616193 RASEFQ8IZ41 740 aa15.81■□□□□ 0.12
AC140725.3-201ENST00000616193 NUBP1P53384 320 aa15.8■□□□□ 0.12
AC140725.3-201ENST00000616193 KLHL34Q8N239 644 aa15.77■□□□□ 0.12
AC140725.3-201ENST00000616193 PHF12Q96QT6 1004 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms