RNA–Protein interactions for RNA: ENST00000615525.1

NCAM1-223, Transcript of neural cell adhesion molecule 1, humanhuman

TSL 5

Gene NCAM1, Length 729 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAM1-223ENST00000615525 NISCHQ9Y2I1 1504 aa26.05■■□□□ 1.76
NCAM1-223ENST00000615525 AEBP2Q6ZN18 517 aaPredicted RBP24.56■■□□□ 1.52
NCAM1-223ENST00000615525 CHIC1Q5VXU3 224 aa23.06■■□□□ 1.28
NCAM1-223ENST00000615525 CCDC180Q9P1Z9 1646 aa22.75■■□□□ 1.23
NCAM1-223ENST00000615525 ZCCHC6Q5VYS8 1495 aaKnown RBP21.96■■□□□ 1.11
NCAM1-223ENST00000615525 DCAF1Q9Y4B6 1507 aa21.71■■□□□ 1.07
NCAM1-223ENST00000615525 MYO15BQ96JP2 1530 aa21.4■■□□□ 1.02
NCAM1-223ENST00000615525 DCAF8L2P0C7V8 631 aa21.18■□□□□ 0.98
NCAM1-223ENST00000615525 SHROOM4Q9ULL8 1493 aa21.14■□□□□ 0.98
NCAM1-223ENST00000615525 NACADO15069 1562 aa21.09■□□□□ 0.97
NCAM1-223ENST00000615525 ABCC9O60706 1549 aa20.94■□□□□ 0.94
NCAM1-223ENST00000615525 RB1CC1Q8TDY2 1594 aa20.81■□□□□ 0.92
NCAM1-223ENST00000615525 SENP3Q9H4L4 574 aaPredicted RBP20.75■□□□□ 0.91
NCAM1-223ENST00000615525 SCRIBQ14160 1630 aa20.7■□□□□ 0.9
NCAM1-223ENST00000615525 SUPT5HO00267 1087 aaKnown RBP20.56■□□□□ 0.88
NCAM1-223ENST00000615525 PHF23Q9BUL5 403 aaPredicted RBP20.55■□□□□ 0.88
NCAM1-223ENST00000615525 UNC13AQ9UPW8 1703 aa20.27■□□□□ 0.84
NCAM1-223ENST00000615525 RSF1Q96T23 1441 aaPredicted RBP20.25■□□□□ 0.83
NCAM1-223ENST00000615525 BAZ1AQ9NRL2 1556 aaPredicted RBP20.17■□□□□ 0.82
NCAM1-223ENST00000615525 CECR2Q9BXF3 1484 aa20.05■□□□□ 0.8
NCAM1-223ENST00000615525 MROH2BQ7Z745 1585 aa20.03■□□□□ 0.8
NCAM1-223ENST00000615525 BICRAQ9NZM4 1560 aa20.02■□□□□ 0.8
NCAM1-223ENST00000615525 SMARCA4P51532 1647 aa19.98■□□□□ 0.79
NCAM1-223ENST00000615525 WIZO95785 1651 aa19.88■□□□□ 0.77
NCAM1-223ENST00000615525 TOP2AP11388 1531 aaKnown RBP19.82■□□□□ 0.76
NCAM1-223ENST00000615525 PEG3Q9GZU2 1588 aa19.82■□□□□ 0.76
NCAM1-223ENST00000615525 PABPN1Q86U42 306 aaKnown RBP eCLIP19.71■□□□□ 0.75
NCAM1-223ENST00000615525 SMARCA2P51531 1590 aa19.67■□□□□ 0.74
NCAM1-223ENST00000615525 ATAD2BQ9ULI0 1458 aa19.54■□□□□ 0.72
NCAM1-223ENST00000615525 EIF4G1Q04637 1599 aaKnown RBP19.53■□□□□ 0.72
NCAM1-223ENST00000615525 CCDC88BA6NC98 1476 aa19.51■□□□□ 0.71
NCAM1-223ENST00000615525 FOXD1Q16676 465 aa19.5■□□□□ 0.71
NCAM1-223ENST00000615525 BAZ1BQ9UIG0 1483 aaKnown RBP19.48■□□□□ 0.71
NCAM1-223ENST00000615525 HMGXB3Q12766 1538 aa19.46■□□□□ 0.71
NCAM1-223ENST00000615525 TRIM41Q8WV44 630 aa19.45■□□□□ 0.7
NCAM1-223ENST00000615525 NCAPD3P42695 1498 aa19.4■□□□□ 0.7
NCAM1-223ENST00000615525 EEA1Q15075 1411 aa19.17■□□□□ 0.66
NCAM1-223ENST00000615525 ABCC8Q09428 1581 aa19.11■□□□□ 0.65
NCAM1-223ENST00000615525 WRNQ14191 1432 aaPredicted RBP eCLIP19.11■□□□□ 0.65
NCAM1-223ENST00000615525 PRDM2Q13029 1718 aa19.06■□□□□ 0.64
NCAM1-223ENST00000615525 CC2D2AQ9P2K1 1620 aa19.06■□□□□ 0.64
NCAM1-223ENST00000615525 CFTRP13569 1480 aa19.02■□□□□ 0.63
NCAM1-223ENST00000615525 LOC105371045A0A1W2PR82 267 aa19■□□□□ 0.63
NCAM1-223ENST00000615525 TOP2BQ02880 1626 aa18.96■□□□□ 0.63
NCAM1-223ENST00000615525 BIVM-ERCC5R4GMW8 1640 aa18.96■□□□□ 0.63
NCAM1-223ENST00000615525 SYNJ1O43426 1573 aa18.93■□□□□ 0.62
NCAM1-223ENST00000615525 FAM9AQ8IZU1 332 aaPredicted RBP18.9■□□□□ 0.62
NCAM1-223ENST00000615525 CADPSQ9ULU8 1353 aa18.88■□□□□ 0.61
NCAM1-223ENST00000615525 CSRNP3Q8WYN3 585 aa18.83■□□□□ 0.6
NCAM1-223ENST00000615525 SOGA1O94964 1423 aa18.81■□□□□ 0.6
NCAM1-223ENST00000615525 KIF21BO75037 1637 aa18.81■□□□□ 0.6
NCAM1-223ENST00000615525 GOLGA3Q08378 1498 aa18.79■□□□□ 0.6
NCAM1-223ENST00000615525 CEP164Q9UPV0 1460 aa18.78■□□□□ 0.6
NCAM1-223ENST00000615525 TNIKQ9UKE5 1360 aa18.77■□□□□ 0.6
NCAM1-223ENST00000615525 LAMC3Q9Y6N6 1575 aa18.75■□□□□ 0.59
NCAM1-223ENST00000615525 CUX1P39880 1505 aa18.74■□□□□ 0.59
NCAM1-223ENST00000615525 KIF27Q86VH2 1401 aa18.66■□□□□ 0.58
NCAM1-223ENST00000615525 ERICH3Q5RHP9 1530 aa18.66■□□□□ 0.58
NCAM1-223ENST00000615525 RUSC2Q8N2Y8 1516 aa18.66■□□□□ 0.58
NCAM1-223ENST00000615525 FANCD2Q9BXW9 1451 aa18.65■□□□□ 0.58
NCAM1-223ENST00000615525 TRIM26Q12899 539 aaPredicted RBP18.64■□□□□ 0.57
NCAM1-223ENST00000615525 CEP162Q5TB80 1403 aa18.61■□□□□ 0.57
NCAM1-223ENST00000615525 DNMBPQ6XZF7 1577 aa18.6■□□□□ 0.57
NCAM1-223ENST00000615525 PDS5BQ9NTI5 1447 aa18.57■□□□□ 0.56
NCAM1-223ENST00000615525 UBTFP17480 764 aaKnown RBP18.56■□□□□ 0.56
NCAM1-223ENST00000615525 PRXQ9BXM0 1461 aa18.56■□□□□ 0.56
NCAM1-223ENST00000615525 PCGF6Q9BYE7 350 aa18.52■□□□□ 0.56
NCAM1-223ENST00000615525 FGD5Q6ZNL6 1462 aa18.52■□□□□ 0.55
NCAM1-223ENST00000615525 TOPBP1Q92547 1522 aa18.48■□□□□ 0.55
NCAM1-223ENST00000615525 RAPGEF2Q9Y4G8 1499 aa18.47■□□□□ 0.55
NCAM1-223ENST00000615525 EHMT2Q96KQ7 1210 aa18.47■□□□□ 0.55
NCAM1-223ENST00000615525 CUX2O14529 1486 aa18.45■□□□□ 0.54
NCAM1-223ENST00000615525 ABCA10Q8WWZ4 1543 aa18.44■□□□□ 0.54
NCAM1-223ENST00000615525 CLIP1P30622 1438 aa18.44■□□□□ 0.54
NCAM1-223ENST00000615525 NESP48681 1621 aa18.43■□□□□ 0.54
NCAM1-223ENST00000615525 POLA1P09884 1462 aaPredicted RBP18.39■□□□□ 0.54
NCAM1-223ENST00000615525 CUL7Q14999 1698 aa18.37■□□□□ 0.53
NCAM1-223ENST00000615525 VPS8Q8N3P4 1428 aa18.35■□□□□ 0.53
NCAM1-223ENST00000615525 WDR97A6NE52 1622 aa18.34■□□□□ 0.53
NCAM1-223ENST00000615525 IGF1RP08069 1367 aa18.34■□□□□ 0.53
NCAM1-223ENST00000615525 KIF21AQ7Z4S6 1674 aa18.34■□□□□ 0.53
NCAM1-223ENST00000615525 URB2Q14146 1524 aaKnown RBP18.33■□□□□ 0.53
NCAM1-223ENST00000615525 HRCP23327 699 aa18.33■□□□□ 0.52
NCAM1-223ENST00000615525 POTEDQ86YR6 584 aa18.32■□□□□ 0.52
NCAM1-223ENST00000615525 PLPPR3Q6T4P5 718 aa18.31■□□□□ 0.52
NCAM1-223ENST00000615525 CARMIL1Q5VZK9 1371 aa18.3■□□□□ 0.52
NCAM1-223ENST00000615525 MRC2Q9UBG0 1479 aa18.26■□□□□ 0.51
NCAM1-223ENST00000615525 ABCA5Q8WWZ7 1642 aa18.25■□□□□ 0.51
NCAM1-223ENST00000615525 APLP2Q06481 763 aa18.23■□□□□ 0.51
NCAM1-223ENST00000615525 RAD54L2Q9Y4B4 1467 aa18.22■□□□□ 0.51
NCAM1-223ENST00000615525 ZEB1P37275 1124 aaPredicted RBP18.22■□□□□ 0.51
NCAM1-223ENST00000615525 PPP6R1Q9UPN7 881 aa18.22■□□□□ 0.51
NCAM1-223ENST00000615525 TARBP1Q13395 1621 aaKnown RBP18.18■□□□□ 0.5
NCAM1-223ENST00000615525 GAPVD1Q14C86 1478 aa18.18■□□□□ 0.5
NCAM1-223ENST00000615525 WDR62O43379 1518 aa18.18■□□□□ 0.5
NCAM1-223ENST00000615525 ARAP1Q96P48 1450 aa18.16■□□□□ 0.5
NCAM1-223ENST00000615525 PIAS4Q8N2W9 510 aaPredicted RBP18.16■□□□□ 0.5
NCAM1-223ENST00000615525 EFCAB5A4FU69 1503 aa18.16■□□□□ 0.5
NCAM1-223ENST00000615525 CTTNBP2Q8WZ74 1663 aa18.15■□□□□ 0.5
NCAM1-223ENST00000615525 ADRA2BP18089 450 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms