RNA–Protein interactions for RNA: ENST00000615378.1

RDM1-219, Transcript of RAD52 motif containing 1, humanhuman

TSL 3 BASIC

Gene RDM1, Length 542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDM1-219ENST00000615378 AEBP2Q6ZN18 517 aaPredicted RBP34.61■■■■□ 3.13
RDM1-219ENST00000615378 CHIC1Q5VXU3 224 aa32.43■■■□□ 2.78
RDM1-219ENST00000615378 SENP3Q9H4L4 574 aaPredicted RBP29.68■■■□□ 2.34
RDM1-219ENST00000615378 PHF23Q9BUL5 403 aaPredicted RBP29.2■■■□□ 2.26
RDM1-219ENST00000615378 FOXD1Q16676 465 aa27.7■■■□□ 2.02
RDM1-219ENST00000615378 POTEDQ86YR6 584 aa26.56■■□□□ 1.84
RDM1-219ENST00000615378 MSH5O43196 834 aa26.19■■□□□ 1.78
RDM1-219ENST00000615378 PIAS4Q8N2W9 510 aaPredicted RBP25.84■■□□□ 1.73
RDM1-219ENST00000615378 PLPPR3Q6T4P5 718 aa25.59■■□□□ 1.69
RDM1-219ENST00000615378 PPP6R1Q9UPN7 881 aa25.43■■□□□ 1.66
RDM1-219ENST00000615378 ADRA2BP18089 450 aa25.37■■□□□ 1.65
RDM1-219ENST00000615378 MAPK8IP2Q13387 824 aaPredicted RBP23.48■■□□□ 1.35
RDM1-219ENST00000615378 DMRT2Q9Y5R5 561 aa23.4■■□□□ 1.34
RDM1-219ENST00000615378 SCAF1Q9H7N4 1312 aaKnown RBP23.25■■□□□ 1.31
RDM1-219ENST00000615378 CACNB1Q02641 598 aaPredicted RBP22.92■■□□□ 1.26
RDM1-219ENST00000615378 DCAF8L1A6NGE4 600 aa22.68■■□□□ 1.22
RDM1-219ENST00000615378 PPP4R3CPQ6ZMV5 832 aa22.36■■□□□ 1.17
RDM1-219ENST00000615378 HOXD11P31277 338 aaPredicted RBP22.27■■□□□ 1.16
RDM1-219ENST00000615378 RNF39Q9H2S5 420 aa22.24■■□□□ 1.15
RDM1-219ENST00000615378 CNKSR2Q8WXI2 1034 aa22.06■■□□□ 1.12
RDM1-219ENST00000615378 RNF216Q9NWF9 866 aaPredicted RBP21.99■■□□□ 1.11
RDM1-219ENST00000615378 C1QBPQ07021 282 aaKnown RBP21.91■■□□□ 1.1
RDM1-219ENST00000615378 DNAJC5BQ9UF47 199 aa21.55■■□□□ 1.04
RDM1-219ENST00000615378 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.38■■□□□ 1.01
RDM1-219ENST00000615378 NCBP3Q53F19 620 aaKnown RBP21.35■■□□□ 1.01
RDM1-219ENST00000615378 NPM3O75607 178 aaKnown RBP20.99■□□□□ 0.95
RDM1-219ENST00000615378 U3KPZ7 1027 aaPredicted RBP20.76■□□□□ 0.91
RDM1-219ENST00000615378 CAPN15O75808 1086 aa20.75■□□□□ 0.91
RDM1-219ENST00000615378 POTEHQ6S545 545 aa20.73■□□□□ 0.91
RDM1-219ENST00000615378 SPINK5Q9NQ38 1064 aaPredicted RBP20.68■□□□□ 0.9
RDM1-219ENST00000615378 DSG3P32926 999 aa20.65■□□□□ 0.9
RDM1-219ENST00000615378 TRHP20396 242 aaPredicted RBP20.29■□□□□ 0.84
RDM1-219ENST00000615378 ABCB7O75027 752 aa20.22■□□□□ 0.83
RDM1-219ENST00000615378 APLP2Q06481 763 aa20.19■□□□□ 0.82
RDM1-219ENST00000615378 SLC4A2P04920 1241 aa20.16■□□□□ 0.82
RDM1-219ENST00000615378 ZNF219Q9P2Y4 722 aaPredicted RBP20.15■□□□□ 0.82
RDM1-219ENST00000615378 KCNA4P22459 653 aa20.08■□□□□ 0.81
RDM1-219ENST00000615378 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.01■□□□□ 0.79
RDM1-219ENST00000615378 HNRNPUL2Q1KMD3 747 aaKnown RBP20.01■□□□□ 0.79
RDM1-219ENST00000615378 SAMD1Q6SPF0 538 aaPredicted RBP19.87■□□□□ 0.77
RDM1-219ENST00000615378 RBM42Q9BTD8 480 aaKnown RBP19.78■□□□□ 0.76
RDM1-219ENST00000615378 CHRDL2Q6WN34 429 aa19.57■□□□□ 0.72
RDM1-219ENST00000615378 POLA2Q14181 598 aa19.54■□□□□ 0.72
RDM1-219ENST00000615378 MYCNP04198 464 aaPredicted RBP19.45■□□□□ 0.7
RDM1-219ENST00000615378 AKT1S1Q96B36 256 aa19.16■□□□□ 0.66
RDM1-219ENST00000615378 SP7Q8TDD2 431 aaPredicted RBP19.15■□□□□ 0.66
RDM1-219ENST00000615378 ZBTB12Q9Y330 459 aaPredicted RBP19.09■□□□□ 0.65
RDM1-219ENST00000615378 ATF5Q9Y2D1 282 aaPredicted RBP19.02■□□□□ 0.64
RDM1-219ENST00000615378 REM2Q8IYK8 340 aaPredicted RBP18.99■□□□□ 0.63
RDM1-219ENST00000615378 OSCARQ8IYS5 282 aa18.96■□□□□ 0.63
RDM1-219ENST00000615378 PIP4P2Q8N4L2 257 aa18.96■□□□□ 0.63
RDM1-219ENST00000615378 FOXD4L1Q9NU39 408 aa18.93■□□□□ 0.62
RDM1-219ENST00000615378 SLC4A1APQ9BWU0 796 aaKnown RBP18.88■□□□□ 0.61
RDM1-219ENST00000615378 HAX1O00165 279 aa18.87■□□□□ 0.61
RDM1-219ENST00000615378 PITPNM1O00562 1244 aa18.81■□□□□ 0.6
RDM1-219ENST00000615378 FXR2P51116 673 aaKnown RBP eCLIP18.7■□□□□ 0.58
RDM1-219ENST00000615378 EVX2Q03828 476 aa18.48■□□□□ 0.55
RDM1-219ENST00000615378 SPDYE2BA6NHP3 402 aa18.42■□□□□ 0.54
RDM1-219ENST00000615378 SPDYE6P0CI01 402 aa18.42■□□□□ 0.54
RDM1-219ENST00000615378 FBLN2P98095 1184 aa18.42■□□□□ 0.54
RDM1-219ENST00000615378 SPDYE2Q495Y8 402 aa18.42■□□□□ 0.54
RDM1-219ENST00000615378 ZBTB22O15209 634 aa18.4■□□□□ 0.54
RDM1-219ENST00000615378 CLEC11AQ9Y240 323 aa18.38■□□□□ 0.53
RDM1-219ENST00000615378 PRKAR2AP13861 404 aaKnown RBP18.35■□□□□ 0.53
RDM1-219ENST00000615378 ATXN8OSP0DMR3 200 aa18.33■□□□□ 0.52
RDM1-219ENST00000615378 SPDYE1Q8NFV5 336 aaPredicted RBP18.29■□□□□ 0.52
RDM1-219ENST00000615378 ZNF692Q9BU19 519 aaPredicted RBP18.16■□□□□ 0.5
RDM1-219ENST00000615378 C19orf67A6NJJ6 358 aa18.13■□□□□ 0.49
RDM1-219ENST00000615378 MKRN4PQ13434 485 aaPredicted RBP18.09■□□□□ 0.49
RDM1-219ENST00000615378 SSUH2Q9Y2M2 353 aa18.07■□□□□ 0.48
RDM1-219ENST00000615378 GABBR2O75899 941 aa18.06■□□□□ 0.48
RDM1-219ENST00000615378 CHADLQ6NUI6 762 aa18.03■□□□□ 0.48
RDM1-219ENST00000615378 LHX8Q68G74 356 aa17.97■□□□□ 0.47
RDM1-219ENST00000615378 PRR29P0C7W0 189 aa17.94■□□□□ 0.46
RDM1-219ENST00000615378 PABPN1Q86U42 306 aaKnown RBP eCLIP17.88■□□□□ 0.45
RDM1-219ENST00000615378 CD44P16070 742 aaKnown RBP17.74■□□□□ 0.43
RDM1-219ENST00000615378 FARP1Q9Y4F1 1045 aaPredicted RBP17.66■□□□□ 0.42
RDM1-219ENST00000615378 POTEIP0CG38 1075 aa17.62■□□□□ 0.41
RDM1-219ENST00000615378 DCBLD2Q96PD2 775 aa17.54■□□□□ 0.4
RDM1-219ENST00000615378 CLCN6P51797 869 aa17.52■□□□□ 0.4
RDM1-219ENST00000615378 PLSCR2Q9NRY7 297 aa17.44■□□□□ 0.38
RDM1-219ENST00000615378 ZRANB1Q9UGI0 708 aa17.42■□□□□ 0.38
RDM1-219ENST00000615378 ZNF579Q8NAF0 562 aaKnown RBP17.37■□□□□ 0.37
RDM1-219ENST00000615378 CREBZFQ9NS37 354 aa17.26■□□□□ 0.35
RDM1-219ENST00000615378 GALR2O43603 387 aaPredicted RBP17.25■□□□□ 0.35
RDM1-219ENST00000615378 STAG3Q9UJ98 1225 aa17.23■□□□□ 0.35
RDM1-219ENST00000615378 PAK3O75914 559 aaPredicted RBP17.19■□□□□ 0.34
RDM1-219ENST00000615378 OTUD5Q96G74 571 aa17.11■□□□□ 0.33
RDM1-219ENST00000615378 PHF12Q96QT6 1004 aa17.11■□□□□ 0.33
RDM1-219ENST00000615378 POTEB2H3BUK9 544 aa17.04■□□□□ 0.32
RDM1-219ENST00000615378 CSRNP3Q8WYN3 585 aa17.03■□□□□ 0.32
RDM1-219ENST00000615378 SPDYE4A6NLX3 237 aa17.02■□□□□ 0.32
RDM1-219ENST00000615378 NPM1P06748 294 aaKnown RBP eCLIP17■□□□□ 0.31
RDM1-219ENST00000615378 POTEMA6NI47 508 aa16.98■□□□□ 0.31
RDM1-219ENST00000615378 PELP1Q8IZL8 1130 aaKnown RBP16.92■□□□□ 0.3
RDM1-219ENST00000615378 POTEGQ6S5H5 508 aa16.9■□□□□ 0.3
RDM1-219ENST00000615378 METRNQ9UJH8 293 aa16.86■□□□□ 0.29
RDM1-219ENST00000615378 MS4A3Q96HJ5 214 aa16.84■□□□□ 0.29
RDM1-219ENST00000615378 MNX1P50219 401 aaPredicted RBP16.83■□□□□ 0.28
RDM1-219ENST00000615378 SLC39A7Q92504 469 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms