RNA–Protein interactions for RNA: ENST00000615041.1

FAM49B-229, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 5 BASIC

Gene FAM49B, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-229ENST00000615041 AEBP2Q6ZN18 517 aaPredicted RBP29.5■■■□□ 2.31
FAM49B-229ENST00000615041 CHIC1Q5VXU3 224 aa29.34■■■□□ 2.29
FAM49B-229ENST00000615041 PHF23Q9BUL5 403 aaPredicted RBP25.88■■□□□ 1.73
FAM49B-229ENST00000615041 SENP3Q9H4L4 574 aaPredicted RBP24.93■■□□□ 1.58
FAM49B-229ENST00000615041 PLPPR3Q6T4P5 718 aa24.08■■□□□ 1.45
FAM49B-229ENST00000615041 FOXD1Q16676 465 aa23.08■■□□□ 1.29
FAM49B-229ENST00000615041 ADRA2BP18089 450 aa22.68■■□□□ 1.22
FAM49B-229ENST00000615041 PPP6R1Q9UPN7 881 aa22.65■■□□□ 1.22
FAM49B-229ENST00000615041 POTEDQ86YR6 584 aa22.12■■□□□ 1.13
FAM49B-229ENST00000615041 PIAS4Q8N2W9 510 aaPredicted RBP21.92■■□□□ 1.1
FAM49B-229ENST00000615041 KCNA4P22459 653 aa21.44■■□□□ 1.02
FAM49B-229ENST00000615041 MSH5O43196 834 aa21.35■■□□□ 1.01
FAM49B-229ENST00000615041 PPP4R3CPQ6ZMV5 832 aa21.3■■□□□ 1
FAM49B-229ENST00000615041 NCBP3Q53F19 620 aaKnown RBP20.89■□□□□ 0.93
FAM49B-229ENST00000615041 SCAF1Q9H7N4 1312 aaKnown RBP20.72■□□□□ 0.91
FAM49B-229ENST00000615041 NPM3O75607 178 aaKnown RBP20.6■□□□□ 0.89
FAM49B-229ENST00000615041 EHMT2Q96KQ7 1210 aa20.6■□□□□ 0.89
FAM49B-229ENST00000615041 CNKSR2Q8WXI2 1034 aa20.57■□□□□ 0.88
FAM49B-229ENST00000615041 SLC4A1APQ9BWU0 796 aaKnown RBP20.52■□□□□ 0.88
FAM49B-229ENST00000615041 MAPK8IP2Q13387 824 aaPredicted RBP20.41■□□□□ 0.86
FAM49B-229ENST00000615041 CSRNP3Q8WYN3 585 aa20.08■□□□□ 0.81
FAM49B-229ENST00000615041 RNF216Q9NWF9 866 aaPredicted RBP20.02■□□□□ 0.8
FAM49B-229ENST00000615041 DMRT2Q9Y5R5 561 aa20■□□□□ 0.79
FAM49B-229ENST00000615041 DNAJC5BQ9UF47 199 aa19.86■□□□□ 0.77
FAM49B-229ENST00000615041 HOXD11P31277 338 aaPredicted RBP19.79■□□□□ 0.76
FAM49B-229ENST00000615041 ZBTB22O15209 634 aa19.73■□□□□ 0.75
FAM49B-229ENST00000615041 FOXD4L1Q9NU39 408 aa19.57■□□□□ 0.72
FAM49B-229ENST00000615041 SLC4A2P04920 1241 aa19.31■□□□□ 0.68
FAM49B-229ENST00000615041 DCAF8L1A6NGE4 600 aa19.14■□□□□ 0.65
FAM49B-229ENST00000615041 MYCNP04198 464 aaPredicted RBP19.01■□□□□ 0.63
FAM49B-229ENST00000615041 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.89■□□□□ 0.61
FAM49B-229ENST00000615041 ATXN8OSP0DMR3 200 aa18.81■□□□□ 0.6
FAM49B-229ENST00000615041 CACNB1Q02641 598 aaPredicted RBP18.75■□□□□ 0.59
FAM49B-229ENST00000615041 U3KPZ7 1027 aaPredicted RBP18.65■□□□□ 0.58
FAM49B-229ENST00000615041 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.58■□□□□ 0.56
FAM49B-229ENST00000615041 HNRNPUL2Q1KMD3 747 aaKnown RBP18.58■□□□□ 0.56
FAM49B-229ENST00000615041 SAMD1Q6SPF0 538 aaPredicted RBP18.54■□□□□ 0.56
FAM49B-229ENST00000615041 ATF5Q9Y2D1 282 aaPredicted RBP18.48■□□□□ 0.55
FAM49B-229ENST00000615041 APLP2Q06481 763 aa18.26■□□□□ 0.51
FAM49B-229ENST00000615041 FKBP8Q14318 412 aa18.13■□□□□ 0.49
FAM49B-229ENST00000615041 RNF39Q9H2S5 420 aa18.13■□□□□ 0.49
FAM49B-229ENST00000615041 ZNF219Q9P2Y4 722 aaPredicted RBP18.12■□□□□ 0.49
FAM49B-229ENST00000615041 SPINK5Q9NQ38 1064 aaPredicted RBP17.96■□□□□ 0.47
FAM49B-229ENST00000615041 TRHP20396 242 aaPredicted RBP17.92■□□□□ 0.46
FAM49B-229ENST00000615041 C1QBPQ07021 282 aaKnown RBP17.9■□□□□ 0.46
FAM49B-229ENST00000615041 CAPN15O75808 1086 aa17.87■□□□□ 0.45
FAM49B-229ENST00000615041 POLA2Q14181 598 aa17.75■□□□□ 0.43
FAM49B-229ENST00000615041 MKRN4PQ13434 485 aaPredicted RBP17.7■□□□□ 0.42
FAM49B-229ENST00000615041 FBLN2P98095 1184 aa17.66■□□□□ 0.42
FAM49B-229ENST00000615041 ABCB7O75027 752 aa17.59■□□□□ 0.41
FAM49B-229ENST00000615041 SPDYE4A6NLX3 237 aa17.57■□□□□ 0.4
FAM49B-229ENST00000615041 AMER1Q5JTC6 1135 aaPredicted RBP17.49■□□□□ 0.39
FAM49B-229ENST00000615041 RTN4Q9NQC3 1192 aaKnown RBP17.47■□□□□ 0.39
FAM49B-229ENST00000615041 ZBTB12Q9Y330 459 aaPredicted RBP17.47■□□□□ 0.39
FAM49B-229ENST00000615041 DSG3P32926 999 aa17.43■□□□□ 0.38
FAM49B-229ENST00000615041 PROM2Q8N271 834 aa17.33■□□□□ 0.36
FAM49B-229ENST00000615041 FBXO3Q9UK99 471 aa17.31■□□□□ 0.36
FAM49B-229ENST00000615041 POTEHQ6S545 545 aa17.18■□□□□ 0.34
FAM49B-229ENST00000615041 OSCARQ8IYS5 282 aa17.13■□□□□ 0.33
FAM49B-229ENST00000615041 ZNF692Q9BU19 519 aaPredicted RBP17.09■□□□□ 0.33
FAM49B-229ENST00000615041 VASPP50552 380 aaPredicted RBP17.07■□□□□ 0.32
FAM49B-229ENST00000615041 SPDYE2BA6NHP3 402 aa17.05■□□□□ 0.32
FAM49B-229ENST00000615041 SPDYE6P0CI01 402 aa17.05■□□□□ 0.32
FAM49B-229ENST00000615041 SPDYE2Q495Y8 402 aa17.05■□□□□ 0.32
FAM49B-229ENST00000615041 SSUH2Q9Y2M2 353 aa16.98■□□□□ 0.31
FAM49B-229ENST00000615041 PABPN1Q86U42 306 aaKnown RBP eCLIP16.89■□□□□ 0.29
FAM49B-229ENST00000615041 IFNLR1Q8IU57 520 aaPredicted RBP16.88■□□□□ 0.29
FAM49B-229ENST00000615041 STAG3Q9UJ98 1225 aa16.8■□□□□ 0.28
FAM49B-229ENST00000615041 SLC24A1O60721 1099 aa16.69■□□□□ 0.26
FAM49B-229ENST00000615041 KLHL34Q8N239 644 aa16.67■□□□□ 0.26
FAM49B-229ENST00000615041 PLCD3Q8N3E9 789 aa16.65■□□□□ 0.26
FAM49B-229ENST00000615041 MIER1Q8N108 512 aa16.61■□□□□ 0.25
FAM49B-229ENST00000615041 SPOCK2Q92563 424 aa16.6■□□□□ 0.25
FAM49B-229ENST00000615041 RBM42Q9BTD8 480 aaKnown RBP16.58■□□□□ 0.24
FAM49B-229ENST00000615041 PKD2Q13563 968 aa16.53■□□□□ 0.24
FAM49B-229ENST00000615041 AKT1S1Q96B36 256 aa16.5■□□□□ 0.23
FAM49B-229ENST00000615041 PLEKHG5O94827 1062 aa16.47■□□□□ 0.23
FAM49B-229ENST00000615041 SPDYE1Q8NFV5 336 aaPredicted RBP16.43■□□□□ 0.22
FAM49B-229ENST00000615041 DCAF8L2P0C7V8 631 aa16.41■□□□□ 0.22
FAM49B-229ENST00000615041 ZBTB47Q9UFB7 747 aaPredicted RBP16.41■□□□□ 0.22
FAM49B-229ENST00000615041 REM2Q8IYK8 340 aaPredicted RBP16.35■□□□□ 0.21
FAM49B-229ENST00000615041 CLEC11AQ9Y240 323 aa16.35■□□□□ 0.21
FAM49B-229ENST00000615041 ECM2O94769 699 aaPredicted RBP16.34■□□□□ 0.21
FAM49B-229ENST00000615041 PRR29P0C7W0 189 aa16.27■□□□□ 0.2
FAM49B-229ENST00000615041 CIZ1Q9ULV3 898 aaPredicted RBP16.26■□□□□ 0.19
FAM49B-229ENST00000615041 CREBZFQ9NS37 354 aa16.19■□□□□ 0.18
FAM49B-229ENST00000615041 RGL2O15211 777 aa16.17■□□□□ 0.18
FAM49B-229ENST00000615041 PLCB2Q00722 1185 aa16.17■□□□□ 0.18
FAM49B-229ENST00000615041 PITPNM1O00562 1244 aa16.16■□□□□ 0.18
FAM49B-229ENST00000615041 NUBP1P53384 320 aa16.12■□□□□ 0.17
FAM49B-229ENST00000615041 GSE1Q14687 1217 aa16.09■□□□□ 0.17
FAM49B-229ENST00000615041 MNX1P50219 401 aaPredicted RBP16.08■□□□□ 0.16
FAM49B-229ENST00000615041 TRIM41Q8WV44 630 aa16.08■□□□□ 0.16
FAM49B-229ENST00000615041 NPM1P06748 294 aaKnown RBP eCLIP16.03■□□□□ 0.16
FAM49B-229ENST00000615041 DCAF8Q5TAQ9 597 aa16.03■□□□□ 0.16
FAM49B-229ENST00000615041 BBXQ8WY36 941 aaPredicted RBP16.01■□□□□ 0.15
FAM49B-229ENST00000615041 FAM212AQ96EL1 285 aa15.98■□□□□ 0.15
FAM49B-229ENST00000615041 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.97■□□□□ 0.15
FAM49B-229ENST00000615041 HAP1P54257 671 aaPredicted RBP15.96■□□□□ 0.15
FAM49B-229ENST00000615041 RASEFQ8IZ41 740 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms