RNA–Protein interactions for RNA: ENST00000614482.4

ACACA-234, Transcript of acetyl-CoA carboxylase alpha, humanhuman

TSL 2

Gene ACACA, Length 2,177 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACACA-234ENST00000614482 NISCHQ9Y2I1 1504 aa25.92■■□□□ 1.74
ACACA-234ENST00000614482 CCDC180Q9P1Z9 1646 aa22.2■■□□□ 1.14
ACACA-234ENST00000614482 ZCCHC6Q5VYS8 1495 aaKnown RBP21.9■■□□□ 1.1
ACACA-234ENST00000614482 SHROOM4Q9ULL8 1493 aa21.79■■□□□ 1.08
ACACA-234ENST00000614482 DCAF8L2P0C7V8 631 aa21.39■■□□□ 1.01
ACACA-234ENST00000614482 DCAF1Q9Y4B6 1507 aa21.36■■□□□ 1.01
ACACA-234ENST00000614482 SUPT5HO00267 1087 aaKnown RBP21.32■■□□□ 1
ACACA-234ENST00000614482 MYO15BQ96JP2 1530 aa20.83■□□□□ 0.93
ACACA-234ENST00000614482 CHIC1Q5VXU3 224 aa20.7■□□□□ 0.9
ACACA-234ENST00000614482 SCRIBQ14160 1630 aa20.64■□□□□ 0.9
ACACA-234ENST00000614482 ABCC9O60706 1549 aa20.62■□□□□ 0.89
ACACA-234ENST00000614482 NACADO15069 1562 aa20.56■□□□□ 0.88
ACACA-234ENST00000614482 RSF1Q96T23 1441 aaPredicted RBP20.41■□□□□ 0.86
ACACA-234ENST00000614482 RB1CC1Q8TDY2 1594 aa20.23■□□□□ 0.83
ACACA-234ENST00000614482 CECR2Q9BXF3 1484 aa20.15■□□□□ 0.82
ACACA-234ENST00000614482 MROH2BQ7Z745 1585 aa20.09■□□□□ 0.81
ACACA-234ENST00000614482 LOC105371045A0A1W2PR82 267 aa20.01■□□□□ 0.79
ACACA-234ENST00000614482 WIZO95785 1651 aa19.97■□□□□ 0.79
ACACA-234ENST00000614482 BAZ1AQ9NRL2 1556 aaPredicted RBP19.95■□□□□ 0.78
ACACA-234ENST00000614482 TRIM41Q8WV44 630 aa19.95■□□□□ 0.78
ACACA-234ENST00000614482 UNC13AQ9UPW8 1703 aa19.87■□□□□ 0.77
ACACA-234ENST00000614482 PCGF6Q9BYE7 350 aa19.83■□□□□ 0.76
ACACA-234ENST00000614482 SMARCA4P51532 1647 aa19.77■□□□□ 0.76
ACACA-234ENST00000614482 HRCP23327 699 aa19.76■□□□□ 0.75
ACACA-234ENST00000614482 TOP2AP11388 1531 aaKnown RBP19.73■□□□□ 0.75
ACACA-234ENST00000614482 FAM9AQ8IZU1 332 aaPredicted RBP19.67■□□□□ 0.74
ACACA-234ENST00000614482 EIF4G1Q04637 1599 aaKnown RBP19.67■□□□□ 0.74
ACACA-234ENST00000614482 BICRAQ9NZM4 1560 aa19.63■□□□□ 0.73
ACACA-234ENST00000614482 CCDC88BA6NC98 1476 aa19.59■□□□□ 0.73
ACACA-234ENST00000614482 TRIM26Q12899 539 aaPredicted RBP19.59■□□□□ 0.73
ACACA-234ENST00000614482 SMARCA2P51531 1590 aa19.58■□□□□ 0.72
ACACA-234ENST00000614482 PABPN1Q86U42 306 aaKnown RBP eCLIP19.58■□□□□ 0.72
ACACA-234ENST00000614482 PEG3Q9GZU2 1588 aa19.46■□□□□ 0.71
ACACA-234ENST00000614482 EHMT2Q96KQ7 1210 aa19.43■□□□□ 0.7
ACACA-234ENST00000614482 ABCC8Q09428 1581 aa19.43■□□□□ 0.7
ACACA-234ENST00000614482 ATAD2BQ9ULI0 1458 aa19.3■□□□□ 0.68
ACACA-234ENST00000614482 PPARGC1BQ86YN6 1023 aaKnown RBP19.26■□□□□ 0.67
ACACA-234ENST00000614482 BAZ1BQ9UIG0 1483 aaKnown RBP19.25■□□□□ 0.67
ACACA-234ENST00000614482 EEA1Q15075 1411 aa19.23■□□□□ 0.67
ACACA-234ENST00000614482 SOGA1O94964 1423 aa19.22■□□□□ 0.67
ACACA-234ENST00000614482 WRNQ14191 1432 aaPredicted RBP eCLIP19.19■□□□□ 0.66
ACACA-234ENST00000614482 CSRNP3Q8WYN3 585 aa19.15■□□□□ 0.66
ACACA-234ENST00000614482 ZEB1P37275 1124 aaPredicted RBP19.13■□□□□ 0.65
ACACA-234ENST00000614482 TNIKQ9UKE5 1360 aa19.11■□□□□ 0.65
ACACA-234ENST00000614482 RUSC2Q8N2Y8 1516 aa19.11■□□□□ 0.65
ACACA-234ENST00000614482 CEP162Q5TB80 1403 aa19.09■□□□□ 0.65
ACACA-234ENST00000614482 SYNJ1O43426 1573 aa19.08■□□□□ 0.64
ACACA-234ENST00000614482 GOLGA3Q08378 1498 aa19.03■□□□□ 0.64
ACACA-234ENST00000614482 UBTFP17480 764 aaKnown RBP19.01■□□□□ 0.63
ACACA-234ENST00000614482 NCAPD3P42695 1498 aa19■□□□□ 0.63
ACACA-234ENST00000614482 HMGXB3Q12766 1538 aa19■□□□□ 0.63
ACACA-234ENST00000614482 CEP164Q9UPV0 1460 aa18.96■□□□□ 0.63
ACACA-234ENST00000614482 KIF21BO75037 1637 aa18.94■□□□□ 0.62
ACACA-234ENST00000614482 TOP2BQ02880 1626 aa18.91■□□□□ 0.62
ACACA-234ENST00000614482 BIVM-ERCC5R4GMW8 1640 aa18.86■□□□□ 0.61
ACACA-234ENST00000614482 CFTRP13569 1480 aa18.78■□□□□ 0.6
ACACA-234ENST00000614482 RAPGEF2Q9Y4G8 1499 aa18.78■□□□□ 0.6
ACACA-234ENST00000614482 TTBK1Q5TCY1 1321 aaPredicted RBP18.78■□□□□ 0.6
ACACA-234ENST00000614482 CLIP1P30622 1438 aa18.78■□□□□ 0.6
ACACA-234ENST00000614482 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.75■□□□□ 0.59
ACACA-234ENST00000614482 CCER1Q8TC90 406 aaPredicted RBP18.74■□□□□ 0.59
ACACA-234ENST00000614482 CUX1P39880 1505 aa18.73■□□□□ 0.59
ACACA-234ENST00000614482 VPS8Q8N3P4 1428 aa18.69■□□□□ 0.58
ACACA-234ENST00000614482 ERICH3Q5RHP9 1530 aa18.68■□□□□ 0.58
ACACA-234ENST00000614482 PRXQ9BXM0 1461 aa18.67■□□□□ 0.58
ACACA-234ENST00000614482 PRDM2Q13029 1718 aa18.65■□□□□ 0.58
ACACA-234ENST00000614482 KIF27Q86VH2 1401 aa18.64■□□□□ 0.57
ACACA-234ENST00000614482 APLP2Q06481 763 aa18.6■□□□□ 0.57
ACACA-234ENST00000614482 CADPSQ9ULU8 1353 aa18.59■□□□□ 0.57
ACACA-234ENST00000614482 RANGAP1P46060 587 aaPredicted RBP18.57■□□□□ 0.56
ACACA-234ENST00000614482 CC2D2AQ9P2K1 1620 aa18.56■□□□□ 0.56
ACACA-234ENST00000614482 ARAP1Q96P48 1450 aa18.49■□□□□ 0.55
ACACA-234ENST00000614482 CUX2O14529 1486 aa18.46■□□□□ 0.55
ACACA-234ENST00000614482 HNRNPUL2Q1KMD3 747 aaKnown RBP18.44■□□□□ 0.54
ACACA-234ENST00000614482 FGD5Q6ZNL6 1462 aa18.43■□□□□ 0.54
ACACA-234ENST00000614482 IGF1RP08069 1367 aa18.42■□□□□ 0.54
ACACA-234ENST00000614482 FANCD2Q9BXW9 1451 aa18.4■□□□□ 0.54
ACACA-234ENST00000614482 ARHGAP35Q9NRY4 1499 aa18.36■□□□□ 0.53
ACACA-234ENST00000614482 CARMIL1Q5VZK9 1371 aa18.35■□□□□ 0.53
ACACA-234ENST00000614482 DNMBPQ6XZF7 1577 aa18.32■□□□□ 0.52
ACACA-234ENST00000614482 KANK4Q5T7N3 995 aaPredicted RBP18.31■□□□□ 0.52
ACACA-234ENST00000614482 TOPBP1Q92547 1522 aa18.27■□□□□ 0.51
ACACA-234ENST00000614482 DIEXFQ68CQ4 756 aaKnown RBP18.27■□□□□ 0.51
ACACA-234ENST00000614482 NESP48681 1621 aa18.26■□□□□ 0.51
ACACA-234ENST00000614482 ABCA10Q8WWZ4 1543 aa18.25■□□□□ 0.51
ACACA-234ENST00000614482 RRBP1Q9P2E9 1410 aaKnown RBP18.24■□□□□ 0.51
ACACA-234ENST00000614482 POLA1P09884 1462 aaPredicted RBP18.24■□□□□ 0.51
ACACA-234ENST00000614482 RAD54L2Q9Y4B4 1467 aa18.23■□□□□ 0.51
ACACA-234ENST00000614482 LAMC3Q9Y6N6 1575 aa18.22■□□□□ 0.51
ACACA-234ENST00000614482 ZNF316A6NFI3 1004 aaPredicted RBP18.21■□□□□ 0.51
ACACA-234ENST00000614482 MAP3K1Q13233 1512 aa18.2■□□□□ 0.5
ACACA-234ENST00000614482 CLSPNQ9HAW4 1339 aa18.16■□□□□ 0.5
ACACA-234ENST00000614482 TIAM1Q13009 1591 aa18.16■□□□□ 0.5
ACACA-234ENST00000614482 CCNB3Q8WWL7 1395 aa18.16■□□□□ 0.5
ACACA-234ENST00000614482 FHAD1B1AJZ9 1412 aa18.15■□□□□ 0.5
ACACA-234ENST00000614482 CUL7Q14999 1698 aa18.15■□□□□ 0.5
ACACA-234ENST00000614482 URB2Q14146 1524 aaKnown RBP18.13■□□□□ 0.49
ACACA-234ENST00000614482 DHX57Q6P158 1386 aaKnown RBP18.12■□□□□ 0.49
ACACA-234ENST00000614482 PDS5BQ9NTI5 1447 aa18.1■□□□□ 0.49
ACACA-234ENST00000614482 WDR97A6NE52 1622 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms