RNA–Protein interactions for RNA: ENST00000613938.4

R3HCC1L-206, Transcript of R3H domain and coiled-coil containing 1 like, humanhuman

TSL 5 BASIC

Gene R3HCC1L, Length 1,397 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1L-206ENST00000613938 AEBP2Q6ZN18 517 aaPredicted RBP32.47■■■□□ 2.79
R3HCC1L-206ENST00000613938 CHIC1Q5VXU3 224 aa31.69■■■□□ 2.66
R3HCC1L-206ENST00000613938 PHF23Q9BUL5 403 aaPredicted RBP27.8■■■□□ 2.04
R3HCC1L-206ENST00000613938 SENP3Q9H4L4 574 aaPredicted RBP27.7■■■□□ 2.02
R3HCC1L-206ENST00000613938 PLPPR3Q6T4P5 718 aa25.75■■□□□ 1.71
R3HCC1L-206ENST00000613938 FOXD1Q16676 465 aa25.65■■□□□ 1.7
R3HCC1L-206ENST00000613938 PPP6R1Q9UPN7 881 aa24.57■■□□□ 1.52
R3HCC1L-206ENST00000613938 ADRA2BP18089 450 aa24.55■■□□□ 1.52
R3HCC1L-206ENST00000613938 PIAS4Q8N2W9 510 aaPredicted RBP24.19■■□□□ 1.46
R3HCC1L-206ENST00000613938 MSH5O43196 834 aa23.79■■□□□ 1.4
R3HCC1L-206ENST00000613938 SCAF1Q9H7N4 1312 aaKnown RBP22.64■■□□□ 1.21
R3HCC1L-206ENST00000613938 PPP4R3CPQ6ZMV5 832 aa22.63■■□□□ 1.21
R3HCC1L-206ENST00000613938 MAPK8IP2Q13387 824 aaPredicted RBP22.3■■□□□ 1.16
R3HCC1L-206ENST00000613938 NCBP3Q53F19 620 aaKnown RBP22.1■■□□□ 1.13
R3HCC1L-206ENST00000613938 CNKSR2Q8WXI2 1034 aa22.07■■□□□ 1.12
R3HCC1L-206ENST00000613938 DMRT2Q9Y5R5 561 aa22.06■■□□□ 1.12
R3HCC1L-206ENST00000613938 KCNA4P22459 653 aa21.93■■□□□ 1.1
R3HCC1L-206ENST00000613938 POTEDQ86YR6 584 aa21.77■■□□□ 1.08
R3HCC1L-206ENST00000613938 NPM3O75607 178 aaKnown RBP21.66■■□□□ 1.06
R3HCC1L-206ENST00000613938 RNF216Q9NWF9 866 aaPredicted RBP21.65■■□□□ 1.06
R3HCC1L-206ENST00000613938 HOXD11P31277 338 aaPredicted RBP21.58■■□□□ 1.04
R3HCC1L-206ENST00000613938 DCAF8L1A6NGE4 600 aa21.13■□□□□ 0.97
R3HCC1L-206ENST00000613938 DNAJC5BQ9UF47 199 aa21.12■□□□□ 0.97
R3HCC1L-206ENST00000613938 SLC4A1APQ9BWU0 796 aaKnown RBP20.92■□□□□ 0.94
R3HCC1L-206ENST00000613938 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.59■□□□□ 0.892e-6■■□□□ 11.9
R3HCC1L-206ENST00000613938 SLC4A2P04920 1241 aa20.46■□□□□ 0.87
R3HCC1L-206ENST00000613938 RNF39Q9H2S5 420 aa20.32■□□□□ 0.84
R3HCC1L-206ENST00000613938 FOXD4L1Q9NU39 408 aa20.27■□□□□ 0.84
R3HCC1L-206ENST00000613938 U3KPZ7 1027 aaPredicted RBP20.17■□□□□ 0.82
R3HCC1L-206ENST00000613938 EHMT2Q96KQ7 1210 aa20.14■□□□□ 0.81
R3HCC1L-206ENST00000613938 C1QBPQ07021 282 aaKnown RBP20.13■□□□□ 0.81
R3HCC1L-206ENST00000613938 ZBTB22O15209 634 aa20.11■□□□□ 0.81
R3HCC1L-206ENST00000613938 MYCNP04198 464 aaPredicted RBP20.07■□□□□ 0.8
R3HCC1L-206ENST00000613938 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.03■□□□□ 0.8
R3HCC1L-206ENST00000613938 HNRNPUL2Q1KMD3 747 aaKnown RBP20.03■□□□□ 0.8
R3HCC1L-206ENST00000613938 CSRNP3Q8WYN3 585 aa19.98■□□□□ 0.79
R3HCC1L-206ENST00000613938 CACNB1Q02641 598 aaPredicted RBP19.91■□□□□ 0.78
R3HCC1L-206ENST00000613938 SAMD1Q6SPF0 538 aaPredicted RBP19.91■□□□□ 0.78
R3HCC1L-206ENST00000613938 APLP2Q06481 763 aa19.87■□□□□ 0.77
R3HCC1L-206ENST00000613938 ATXN8OSP0DMR3 200 aa19.64■□□□□ 0.73
R3HCC1L-206ENST00000613938 CAPN15O75808 1086 aa19.62■□□□□ 0.73
R3HCC1L-206ENST00000613938 SPINK5Q9NQ38 1064 aaPredicted RBP19.62■□□□□ 0.73
R3HCC1L-206ENST00000613938 ZNF219Q9P2Y4 722 aaPredicted RBP19.54■□□□□ 0.72
R3HCC1L-206ENST00000613938 TRHP20396 242 aaPredicted RBP19.49■□□□□ 0.71
R3HCC1L-206ENST00000613938 ATF5Q9Y2D1 282 aaPredicted RBP19.44■□□□□ 0.7
R3HCC1L-206ENST00000613938 DSG3P32926 999 aa19.29■□□□□ 0.68
R3HCC1L-206ENST00000613938 NISCHQ9Y2I1 1504 aa19.2■□□□□ 0.66
R3HCC1L-206ENST00000613938 ABCB7O75027 752 aa19.19■□□□□ 0.66
R3HCC1L-206ENST00000613938 POLA2Q14181 598 aa19.17■□□□□ 0.66
R3HCC1L-206ENST00000613938 ZBTB12Q9Y330 459 aaPredicted RBP18.92■□□□□ 0.62
R3HCC1L-206ENST00000613938 FBLN2P98095 1184 aa18.77■□□□□ 0.6
R3HCC1L-206ENST00000613938 MKRN4PQ13434 485 aaPredicted RBP18.59■□□□□ 0.57
R3HCC1L-206ENST00000613938 RBM42Q9BTD8 480 aaKnown RBP18.48■□□□□ 0.55
R3HCC1L-206ENST00000613938 OSCARQ8IYS5 282 aa18.45■□□□□ 0.54
R3HCC1L-206ENST00000613938 SPDYE2BA6NHP3 402 aa18.35■□□□□ 0.53
R3HCC1L-206ENST00000613938 SPDYE6P0CI01 402 aa18.35■□□□□ 0.53
R3HCC1L-206ENST00000613938 SPDYE2Q495Y8 402 aa18.35■□□□□ 0.53
R3HCC1L-206ENST00000613938 ZNF692Q9BU19 519 aaPredicted RBP18.27■□□□□ 0.51
R3HCC1L-206ENST00000613938 SPDYE4A6NLX3 237 aa18.21■□□□□ 0.51
R3HCC1L-206ENST00000613938 AKT1S1Q96B36 256 aa18.19■□□□□ 0.5
R3HCC1L-206ENST00000613938 SSUH2Q9Y2M2 353 aa18.15■□□□□ 0.5
R3HCC1L-206ENST00000613938 FKBP8Q14318 412 aa18.09■□□□□ 0.49
R3HCC1L-206ENST00000613938 PABPN1Q86U42 306 aaKnown RBP eCLIP17.98■□□□□ 0.47
R3HCC1L-206ENST00000613938 REM2Q8IYK8 340 aaPredicted RBP17.98■□□□□ 0.47
R3HCC1L-206ENST00000613938 PROM2Q8N271 834 aa17.85■□□□□ 0.45
R3HCC1L-206ENST00000613938 SPDYE1Q8NFV5 336 aaPredicted RBP17.84■□□□□ 0.45
R3HCC1L-206ENST00000613938 STAG3Q9UJ98 1225 aa17.77■□□□□ 0.43
R3HCC1L-206ENST00000613938 PITPNM1O00562 1244 aa17.75■□□□□ 0.43
R3HCC1L-206ENST00000613938 CLEC11AQ9Y240 323 aa17.75■□□□□ 0.43
R3HCC1L-206ENST00000613938 CHRDL2Q6WN34 429 aa17.68■□□□□ 0.42
R3HCC1L-206ENST00000613938 PRR29P0C7W0 189 aa17.6■□□□□ 0.41
R3HCC1L-206ENST00000613938 FBXO3Q9UK99 471 aa17.59■□□□□ 0.41
R3HCC1L-206ENST00000613938 FXR2P51116 673 aaKnown RBP eCLIP17.47■□□□□ 0.39
R3HCC1L-206ENST00000613938 PIP4P2Q8N4L2 257 aa17.41■□□□□ 0.38
R3HCC1L-206ENST00000613938 PRKAR2AP13861 404 aaKnown RBP17.33■□□□□ 0.36
R3HCC1L-206ENST00000613938 PLEKHG5O94827 1062 aa17.32■□□□□ 0.36
R3HCC1L-206ENST00000613938 MIER1Q8N108 512 aa17.32■□□□□ 0.36
R3HCC1L-206ENST00000613938 CCDC180Q9P1Z9 1646 aa17.28■□□□□ 0.36
R3HCC1L-206ENST00000613938 PLCD3Q8N3E9 789 aa17.28■□□□□ 0.36
R3HCC1L-206ENST00000613938 CREBZFQ9NS37 354 aa17.28■□□□□ 0.36
R3HCC1L-206ENST00000613938 CHADLQ6NUI6 762 aa17.26■□□□□ 0.35
R3HCC1L-206ENST00000613938 POTEHQ6S545 545 aa17.26■□□□□ 0.35
R3HCC1L-206ENST00000613938 VASPP50552 380 aaPredicted RBP17.25■□□□□ 0.35
R3HCC1L-206ENST00000613938 ZBTB47Q9UFB7 747 aaPredicted RBP17.16■□□□□ 0.34
R3HCC1L-206ENST00000613938 FARP1Q9Y4F1 1045 aaPredicted RBP17.15■□□□□ 0.34
R3HCC1L-206ENST00000613938 NPM1P06748 294 aaKnown RBP eCLIP17.1■□□□□ 0.33
R3HCC1L-206ENST00000613938 MNX1P50219 401 aaPredicted RBP17.06■□□□□ 0.32
R3HCC1L-206ENST00000613938 KLHL34Q8N239 644 aa17.05■□□□□ 0.32
R3HCC1L-206ENST00000613938 IFNLR1Q8IU57 520 aaPredicted RBP16.99■□□□□ 0.31
R3HCC1L-206ENST00000613938 ABCC9O60706 1549 aa16.95■□□□□ 0.3
R3HCC1L-206ENST00000613938 HAX1O00165 279 aa16.94■□□□□ 0.3
R3HCC1L-206ENST00000613938 C19orf67A6NJJ6 358 aa16.87■□□□□ 0.29
R3HCC1L-206ENST00000613938 SPOCK2Q92563 424 aa16.87■□□□□ 0.29
R3HCC1L-206ENST00000613938 PAK3O75914 559 aaPredicted RBP16.84■□□□□ 0.29
R3HCC1L-206ENST00000613938 CD44P16070 742 aaKnown RBP16.83■□□□□ 0.28
R3HCC1L-206ENST00000613938 NUBP1P53384 320 aa16.82■□□□□ 0.28
R3HCC1L-206ENST00000613938 RASEFQ8IZ41 740 aa16.76■□□□□ 0.27
R3HCC1L-206ENST00000613938 FAM212AQ96EL1 285 aa16.75■□□□□ 0.27
R3HCC1L-206ENST00000613938 TSPYL2Q9H2G4 693 aaPredicted RBP16.73■□□□□ 0.27
R3HCC1L-206ENST00000613938 ZRANB1Q9UGI0 708 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms