RNA–Protein interactions for RNA: ENST00000612945.4

AC004852.2-203, humanhuman

TSL 1 (best)

Gene AC004852.2, Length 878 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004852.2-203ENST00000612945 AEBP2Q6ZN18 517 aaPredicted RBP25.65■■□□□ 1.7
AC004852.2-203ENST00000612945 CHIC1Q5VXU3 224 aa24.92■■□□□ 1.58
AC004852.2-203ENST00000612945 PHF23Q9BUL5 403 aaPredicted RBP21.9■■□□□ 1.1
AC004852.2-203ENST00000612945 SENP3Q9H4L4 574 aaPredicted RBP21.82■■□□□ 1.08
AC004852.2-203ENST00000612945 FOXD1Q16676 465 aa20.26■□□□□ 0.83
AC004852.2-203ENST00000612945 PLPPR3Q6T4P5 718 aa20.19■□□□□ 0.82
AC004852.2-203ENST00000612945 PPP6R1Q9UPN7 881 aa19.4■□□□□ 0.7
AC004852.2-203ENST00000612945 ADRA2BP18089 450 aa19.39■□□□□ 0.69
AC004852.2-203ENST00000612945 POTEDQ86YR6 584 aa19.34■□□□□ 0.69
AC004852.2-203ENST00000612945 PIAS4Q8N2W9 510 aaPredicted RBP19.09■□□□□ 0.65
AC004852.2-203ENST00000612945 MSH5O43196 834 aa18.85■□□□□ 0.61
AC004852.2-203ENST00000612945 PPP4R3CPQ6ZMV5 832 aa17.79■□□□□ 0.44
AC004852.2-203ENST00000612945 SCAF1Q9H7N4 1312 aaKnown RBP17.76■□□□□ 0.43
AC004852.2-203ENST00000612945 MAPK8IP2Q13387 824 aaPredicted RBP17.64■□□□□ 0.41
AC004852.2-203ENST00000612945 DMRT2Q9Y5R5 561 aa17.38■□□□□ 0.37
AC004852.2-203ENST00000612945 CNKSR2Q8WXI2 1034 aa17.32■□□□□ 0.36
AC004852.2-203ENST00000612945 NCBP3Q53F19 620 aaKnown RBP17.3■□□□□ 0.36
AC004852.2-203ENST00000612945 KCNA4P22459 653 aa17.19■□□□□ 0.34
AC004852.2-203ENST00000612945 NPM3O75607 178 aaKnown RBP17■□□□□ 0.31
AC004852.2-203ENST00000612945 RNF216Q9NWF9 866 aaPredicted RBP16.99■□□□□ 0.31
AC004852.2-203ENST00000612945 HOXD11P31277 338 aaPredicted RBP16.95■□□□□ 0.3
AC004852.2-203ENST00000612945 DCAF8L1A6NGE4 600 aa16.73■□□□□ 0.27
AC004852.2-203ENST00000612945 CACNB1Q02641 598 aaPredicted RBP16.58■□□□□ 0.24
AC004852.2-203ENST00000612945 DNAJC5BQ9UF47 199 aa16.45■□□□□ 0.22
AC004852.2-203ENST00000612945 SLC4A1APQ9BWU0 796 aaKnown RBP16.36■□□□□ 0.21
AC004852.2-203ENST00000612945 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.23■□□□□ 0.19
AC004852.2-203ENST00000612945 RNF39Q9H2S5 420 aa16.11■□□□□ 0.17
AC004852.2-203ENST00000612945 SLC4A2P04920 1241 aa16.08■□□□□ 0.16
AC004852.2-203ENST00000612945 U3KPZ7 1027 aaPredicted RBP15.88■□□□□ 0.13
AC004852.2-203ENST00000612945 C1QBPQ07021 282 aaKnown RBP15.86■□□□□ 0.13
AC004852.2-203ENST00000612945 FOXD4L1Q9NU39 408 aa15.85■□□□□ 0.13
AC004852.2-203ENST00000612945 ZBTB22O15209 634 aa15.77■□□□□ 0.12
AC004852.2-203ENST00000612945 EHMT2Q96KQ7 1210 aa15.74■□□□□ 0.11
AC004852.2-203ENST00000612945 MYCNP04198 464 aaPredicted RBP15.71■□□□□ 0.11
AC004852.2-203ENST00000612945 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.67■□□□□ 0.1
AC004852.2-203ENST00000612945 HNRNPUL2Q1KMD3 747 aaKnown RBP15.67■□□□□ 0.1
AC004852.2-203ENST00000612945 SAMD1Q6SPF0 538 aaPredicted RBP15.6■□□□□ 0.09
AC004852.2-203ENST00000612945 CSRNP3Q8WYN3 585 aa15.6■□□□□ 0.09
AC004852.2-203ENST00000612945 APLP2Q06481 763 aa15.55■□□□□ 0.08
AC004852.2-203ENST00000612945 SPINK5Q9NQ38 1064 aaPredicted RBP15.51■□□□□ 0.07
AC004852.2-203ENST00000612945 CAPN15O75808 1086 aa15.5■□□□□ 0.07
AC004852.2-203ENST00000612945 TRHP20396 242 aaPredicted RBP15.39■□□□□ 0.05
AC004852.2-203ENST00000612945 ZNF219Q9P2Y4 722 aaPredicted RBP15.33■□□□□ 0.04
AC004852.2-203ENST00000612945 ATXN8OSP0DMR3 200 aa15.32■□□□□ 0.04
AC004852.2-203ENST00000612945 ATF5Q9Y2D1 282 aaPredicted RBP15.31■□□□□ 0.04
AC004852.2-203ENST00000612945 DSG3P32926 999 aa15.22■□□□□ 0.03
AC004852.2-203ENST00000612945 ABCB7O75027 752 aa15.18■□□□□ 0.02
AC004852.2-203ENST00000612945 POLA2Q14181 598 aa15.1■□□□□ 0.01
AC004852.2-203ENST00000612945 POTEHQ6S545 545 aa15.04■□□□□ -0
AC004852.2-203ENST00000612945 ZBTB12Q9Y330 459 aaPredicted RBP14.8□□□□□ -0.04
AC004852.2-203ENST00000612945 FBLN2P98095 1184 aa14.72□□□□□ -0.05
AC004852.2-203ENST00000612945 MKRN4PQ13434 485 aaPredicted RBP14.62□□□□□ -0.07
AC004852.2-203ENST00000612945 OSCARQ8IYS5 282 aa14.55□□□□□ -0.08
AC004852.2-203ENST00000612945 RBM42Q9BTD8 480 aaKnown RBP14.52□□□□□ -0.09
AC004852.2-203ENST00000612945 SPDYE2BA6NHP3 402 aa14.39□□□□□ -0.11
AC004852.2-203ENST00000612945 SPDYE6P0CI01 402 aa14.39□□□□□ -0.11
AC004852.2-203ENST00000612945 SPDYE2Q495Y8 402 aa14.39□□□□□ -0.11
AC004852.2-203ENST00000612945 ZNF692Q9BU19 519 aaPredicted RBP14.36□□□□□ -0.11
AC004852.2-203ENST00000612945 AKT1S1Q96B36 256 aa14.31□□□□□ -0.12
AC004852.2-203ENST00000612945 SPDYE4A6NLX3 237 aa14.26□□□□□ -0.13
AC004852.2-203ENST00000612945 SSUH2Q9Y2M2 353 aa14.22□□□□□ -0.13
AC004852.2-203ENST00000612945 REM2Q8IYK8 340 aaPredicted RBP14.18□□□□□ -0.14
AC004852.2-203ENST00000612945 CHRDL2Q6WN34 429 aa14.15□□□□□ -0.14
AC004852.2-203ENST00000612945 PABPN1Q86U42 306 aaKnown RBP eCLIP14.14□□□□□ -0.15
AC004852.2-203ENST00000612945 FKBP8Q14318 412 aa14.13□□□□□ -0.15
AC004852.2-203ENST00000612945 SPDYE1Q8NFV5 336 aaPredicted RBP14.02□□□□□ -0.17
AC004852.2-203ENST00000612945 CLEC11AQ9Y240 323 aa14.01□□□□□ -0.17
AC004852.2-203ENST00000612945 PITPNM1O00562 1244 aa14□□□□□ -0.17
AC004852.2-203ENST00000612945 PROM2Q8N271 834 aa13.92□□□□□ -0.18
AC004852.2-203ENST00000612945 STAG3Q9UJ98 1225 aa13.89□□□□□ -0.19
AC004852.2-203ENST00000612945 PRR29P0C7W0 189 aa13.86□□□□□ -0.19
AC004852.2-203ENST00000612945 SP7Q8TDD2 431 aaPredicted RBP13.86□□□□□ -0.19
AC004852.2-203ENST00000612945 FXR2P51116 673 aaKnown RBP eCLIP13.77□□□□□ -0.21
AC004852.2-203ENST00000612945 PIP4P2Q8N4L2 257 aa13.77□□□□□ -0.21
AC004852.2-203ENST00000612945 FBXO3Q9UK99 471 aa13.69□□□□□ -0.22
AC004852.2-203ENST00000612945 PRKAR2AP13861 404 aaKnown RBP13.68□□□□□ -0.22
AC004852.2-203ENST00000612945 CHADLQ6NUI6 762 aa13.65□□□□□ -0.22
AC004852.2-203ENST00000612945 HAX1O00165 279 aa13.64□□□□□ -0.23
AC004852.2-203ENST00000612945 MIER1Q8N108 512 aa13.6□□□□□ -0.23
AC004852.2-203ENST00000612945 CREBZFQ9NS37 354 aa13.59□□□□□ -0.23
AC004852.2-203ENST00000612945 PLCD3Q8N3E9 789 aa13.54□□□□□ -0.24
AC004852.2-203ENST00000612945 PLEKHG5O94827 1062 aa13.53□□□□□ -0.24
AC004852.2-203ENST00000612945 EVX2Q03828 476 aa13.51□□□□□ -0.25
AC004852.2-203ENST00000612945 FARP1Q9Y4F1 1045 aaPredicted RBP13.5□□□□□ -0.25
AC004852.2-203ENST00000612945 VASPP50552 380 aaPredicted RBP13.46□□□□□ -0.25
AC004852.2-203ENST00000612945 NPM1P06748 294 aaKnown RBP eCLIP13.41□□□□□ -0.26
AC004852.2-203ENST00000612945 MNX1P50219 401 aaPredicted RBP13.4□□□□□ -0.26
AC004852.2-203ENST00000612945 ZBTB47Q9UFB7 747 aaPredicted RBP13.37□□□□□ -0.27
AC004852.2-203ENST00000612945 KLHL34Q8N239 644 aa13.36□□□□□ -0.27
AC004852.2-203ENST00000612945 C19orf67A6NJJ6 358 aa13.3□□□□□ -0.28
AC004852.2-203ENST00000612945 IFNLR1Q8IU57 520 aaPredicted RBP13.28□□□□□ -0.28
AC004852.2-203ENST00000612945 CD44P16070 742 aaKnown RBP13.27□□□□□ -0.29
AC004852.2-203ENST00000612945 PAK3O75914 559 aaPredicted RBP13.22□□□□□ -0.29
AC004852.2-203ENST00000612945 ZRANB1Q9UGI0 708 aa13.2□□□□□ -0.3
AC004852.2-203ENST00000612945 TSPYL2Q9H2G4 693 aaPredicted RBP13.19□□□□□ -0.3
AC004852.2-203ENST00000612945 NUBP1P53384 320 aa13.18□□□□□ -0.3
AC004852.2-203ENST00000612945 SPOCK2Q92563 424 aa13.17□□□□□ -0.3
AC004852.2-203ENST00000612945 RASEFQ8IZ41 740 aa13.16□□□□□ -0.3
AC004852.2-203ENST00000612945 DCAF8Q5TAQ9 597 aa13.13□□□□□ -0.31
AC004852.2-203ENST00000612945 FAM212AQ96EL1 285 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 284.9 ms