RNA–Protein interactions for RNA: ENST00000612161.4

SLC38A1-211, Transcript of solute carrier family 38 member 1, humanhuman

TSL 5 BASIC

Gene SLC38A1, Length 1,607 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-211ENST00000612161 AEBP2Q6ZN18 517 aaPredicted RBP21.86■■□□□ 1.09
SLC38A1-211ENST00000612161 CHIC1Q5VXU3 224 aa20.66■□□□□ 0.9
SLC38A1-211ENST00000612161 SENP3Q9H4L4 574 aaPredicted RBP19.01■□□□□ 0.63
SLC38A1-211ENST00000612161 PHF23Q9BUL5 403 aaPredicted RBP18.54■□□□□ 0.56
SLC38A1-211ENST00000612161 POTEDQ86YR6 584 aa18.12■□□□□ 0.49
SLC38A1-211ENST00000612161 FOXD1Q16676 465 aa17.69■□□□□ 0.42
SLC38A1-211ENST00000612161 MSH5O43196 834 aa17.09■□□□□ 0.33
SLC38A1-211ENST00000612161 PIAS4Q8N2W9 510 aaPredicted RBP16.38■□□□□ 0.21
SLC38A1-211ENST00000612161 PPP6R1Q9UPN7 881 aa15.75■□□□□ 0.11
SLC38A1-211ENST00000612161 ADRA2BP18089 450 aa15.69■□□□□ 0.1
SLC38A1-211ENST00000612161 PLPPR3Q6T4P5 718 aa15.63■□□□□ 0.09
SLC38A1-211ENST00000612161 CACNB1Q02641 598 aaPredicted RBP15.19■□□□□ 0.02
SLC38A1-211ENST00000612161 DMRT2Q9Y5R5 561 aa14.88□□□□□ -0.03
SLC38A1-211ENST00000612161 MAPK8IP2Q13387 824 aaPredicted RBP14.66□□□□□ -0.06
SLC38A1-211ENST00000612161 SCAF1Q9H7N4 1312 aaKnown RBP14.61□□□□□ -0.07
SLC38A1-211ENST00000612161 RNF39Q9H2S5 420 aa14.38□□□□□ -0.11
SLC38A1-211ENST00000612161 DCAF8L1A6NGE4 600 aa14.36□□□□□ -0.11
SLC38A1-211ENST00000612161 C1QBPQ07021 282 aaKnown RBP14.22□□□□□ -0.13
SLC38A1-211ENST00000612161 EHMT2Q96KQ7 1210 aa14.16□□□□□ -0.14
SLC38A1-211ENST00000612161 POTEHQ6S545 545 aa14.05□□□□□ -0.16
SLC38A1-211ENST00000612161 HOXD11P31277 338 aaPredicted RBP13.95□□□□□ -0.18
SLC38A1-211ENST00000612161 KCNA4P22459 653 aa13.82□□□□□ -0.2
SLC38A1-211ENST00000612161 DNAJC5BQ9UF47 199 aa13.76□□□□□ -0.21
SLC38A1-211ENST00000612161 RNF216Q9NWF9 866 aaPredicted RBP13.64□□□□□ -0.23
SLC38A1-211ENST00000612161 CSRNP3Q8WYN3 585 aa13.58□□□□□ -0.24
SLC38A1-211ENST00000612161 SLC24A1O60721 1099 aa13.56□□□□□ -0.24
SLC38A1-211ENST00000612161 CNKSR2Q8WXI2 1034 aa13.54□□□□□ -0.24
SLC38A1-211ENST00000612161 PPP4R3CPQ6ZMV5 832 aa13.53□□□□□ -0.24
SLC38A1-211ENST00000612161 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.37□□□□□ -0.27
SLC38A1-211ENST00000612161 SLC4A1APQ9BWU0 796 aaKnown RBP13.33□□□□□ -0.28
SLC38A1-211ENST00000612161 DSG3P32926 999 aa13.15□□□□□ -0.3
SLC38A1-211ENST00000612161 CAPN15O75808 1086 aa13.07□□□□□ -0.32
SLC38A1-211ENST00000612161 RTN4Q9NQC3 1192 aaKnown RBP13.04□□□□□ -0.32
SLC38A1-211ENST00000612161 AMER1Q5JTC6 1135 aaPredicted RBP13.01□□□□□ -0.33
SLC38A1-211ENST00000612161 SPINK5Q9NQ38 1064 aaPredicted RBP12.92□□□□□ -0.34
SLC38A1-211ENST00000612161 NCBP3Q53F19 620 aaKnown RBP12.86□□□□□ -0.35
SLC38A1-211ENST00000612161 U3KPZ7 1027 aaPredicted RBP12.86□□□□□ -0.35
SLC38A1-211ENST00000612161 ZBTB22O15209 634 aa12.77□□□□□ -0.36
SLC38A1-211ENST00000612161 SP7Q8TDD2 431 aaPredicted RBP12.76□□□□□ -0.37
SLC38A1-211ENST00000612161 RBM42Q9BTD8 480 aaKnown RBP12.73□□□□□ -0.37
SLC38A1-211ENST00000612161 CHRDL2Q6WN34 429 aa12.7□□□□□ -0.38
SLC38A1-211ENST00000612161 APLP2Q06481 763 aa12.7□□□□□ -0.38
SLC38A1-211ENST00000612161 NPM3O75607 178 aaKnown RBP12.68□□□□□ -0.38
SLC38A1-211ENST00000612161 ZNF219Q9P2Y4 722 aaPredicted RBP12.63□□□□□ -0.39
SLC38A1-211ENST00000612161 TRHP20396 242 aaPredicted RBP12.62□□□□□ -0.39
SLC38A1-211ENST00000612161 ABCB7O75027 752 aa12.6□□□□□ -0.39
SLC38A1-211ENST00000612161 FOXD4L1Q9NU39 408 aa12.4□□□□□ -0.42
SLC38A1-211ENST00000612161 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.4□□□□□ -0.42
SLC38A1-211ENST00000612161 HNRNPUL2Q1KMD3 747 aaKnown RBP12.4□□□□□ -0.42
SLC38A1-211ENST00000612161 HAX1O00165 279 aa12.27□□□□□ -0.44
SLC38A1-211ENST00000612161 SAMD1Q6SPF0 538 aaPredicted RBP12.22□□□□□ -0.45
SLC38A1-211ENST00000612161 AKT1S1Q96B36 256 aa12.18□□□□□ -0.46
SLC38A1-211ENST00000612161 PIP4P2Q8N4L2 257 aa12.16□□□□□ -0.46
SLC38A1-211ENST00000612161 FKBP8Q14318 412 aa12.15□□□□□ -0.46
SLC38A1-211ENST00000612161 SLC4A2P04920 1241 aa12.11□□□□□ -0.47
SLC38A1-211ENST00000612161 POLA2Q14181 598 aa12.04□□□□□ -0.48
SLC38A1-211ENST00000612161 REM2Q8IYK8 340 aaPredicted RBP12□□□□□ -0.49
SLC38A1-211ENST00000612161 PLSCR2Q9NRY7 297 aa12□□□□□ -0.49
SLC38A1-211ENST00000612161 FXR2P51116 673 aaKnown RBP eCLIP11.97□□□□□ -0.49
SLC38A1-211ENST00000612161 LHX8Q68G74 356 aa11.97□□□□□ -0.49
SLC38A1-211ENST00000612161 PLCB2Q00722 1185 aa11.94□□□□□ -0.5
SLC38A1-211ENST00000612161 ATXN8OSP0DMR3 200 aa11.89□□□□□ -0.51
SLC38A1-211ENST00000612161 ZBTB12Q9Y330 459 aaPredicted RBP11.89□□□□□ -0.51
SLC38A1-211ENST00000612161 EVX2Q03828 476 aa11.86□□□□□ -0.51
SLC38A1-211ENST00000612161 BCANQ96GW7 911 aa11.86□□□□□ -0.51
SLC38A1-211ENST00000612161 PITPNM1O00562 1244 aa11.86□□□□□ -0.51
SLC38A1-211ENST00000612161 PRKCSHP14314 528 aaPredicted RBP11.86□□□□□ -0.51
SLC38A1-211ENST00000612161 TAOK2Q9UL54 1235 aa11.79□□□□□ -0.52
SLC38A1-211ENST00000612161 HAP1P54257 671 aaPredicted RBP11.71□□□□□ -0.54
SLC38A1-211ENST00000612161 GABBR2O75899 941 aa11.68□□□□□ -0.54
SLC38A1-211ENST00000612161 MYCNP04198 464 aaPredicted RBP11.68□□□□□ -0.54
SLC38A1-211ENST00000612161 OSCARQ8IYS5 282 aa11.67□□□□□ -0.54
SLC38A1-211ENST00000612161 VSIG10Q8N0Z9 540 aa11.64□□□□□ -0.55
SLC38A1-211ENST00000612161 C19orf67A6NJJ6 358 aa11.63□□□□□ -0.55
SLC38A1-211ENST00000612161 PRKAR2AP13861 404 aaKnown RBP11.59□□□□□ -0.55
SLC38A1-211ENST00000612161 TPRNQ4KMQ1 711 aa11.56□□□□□ -0.56
SLC38A1-211ENST00000612161 DAXXQ9UER7 740 aaPredicted RBP11.5□□□□□ -0.57
SLC38A1-211ENST00000612161 FBXO3Q9UK99 471 aa11.42□□□□□ -0.58
SLC38A1-211ENST00000612161 SPDYE1Q8NFV5 336 aaPredicted RBP11.42□□□□□ -0.58
SLC38A1-211ENST00000612161 MYT1Q01538 1121 aa11.41□□□□□ -0.58
SLC38A1-211ENST00000612161 CLEC11AQ9Y240 323 aa11.39□□□□□ -0.59
SLC38A1-211ENST00000612161 TIMELESSQ9UNS1 1208 aa11.38□□□□□ -0.59
SLC38A1-211ENST00000612161 KDM2AQ9Y2K7 1162 aa11.38□□□□□ -0.59
SLC38A1-211ENST00000612161 CLCN6P51797 869 aa11.37□□□□□ -0.59
SLC38A1-211ENST00000612161 ARXQ96QS3 562 aa11.37□□□□□ -0.59
SLC38A1-211ENST00000612161 SPDYE2BA6NHP3 402 aa11.36□□□□□ -0.59
SLC38A1-211ENST00000612161 DCAF8L2P0C7V8 631 aa11.36□□□□□ -0.59
SLC38A1-211ENST00000612161 SPDYE6P0CI01 402 aa11.36□□□□□ -0.59
SLC38A1-211ENST00000612161 SPDYE2Q495Y8 402 aa11.36□□□□□ -0.59
SLC38A1-211ENST00000612161 POTEIP0CG38 1075 aa11.31□□□□□ -0.6
SLC38A1-211ENST00000612161 PCDH10Q9P2E7 1040 aa11.31□□□□□ -0.6
SLC38A1-211ENST00000612161 POTEMA6NI47 508 aa11.3□□□□□ -0.6
SLC38A1-211ENST00000612161 ATF5Q9Y2D1 282 aaPredicted RBP11.3□□□□□ -0.6
SLC38A1-211ENST00000612161 PELP1Q8IZL8 1130 aaKnown RBP11.29□□□□□ -0.6
SLC38A1-211ENST00000612161 FBLN2P98095 1184 aa11.27□□□□□ -0.6
SLC38A1-211ENST00000612161 PKD2Q13563 968 aa11.27□□□□□ -0.6
SLC38A1-211ENST00000612161 TULP1O00294 542 aaPredicted RBP11.27□□□□□ -0.61
SLC38A1-211ENST00000612161 VASPP50552 380 aaPredicted RBP11.26□□□□□ -0.61
SLC38A1-211ENST00000612161 DCBLD2Q96PD2 775 aa11.26□□□□□ -0.61
SLC38A1-211ENST00000612161 POTEGQ6S5H5 508 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms