RNA–Protein interactions for RNA: ENST00000611273.1

FMR1-214, Transcript of fragile X mental retardation 1, humanhuman

TSL 2

Gene FMR1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-214ENST00000611273 AEBP2Q6ZN18 517 aaPredicted RBP27.03■■□□□ 1.92
FMR1-214ENST00000611273 CHIC1Q5VXU3 224 aa25.36■■□□□ 1.65
FMR1-214ENST00000611273 SENP3Q9H4L4 574 aaPredicted RBP22.96■■□□□ 1.27
FMR1-214ENST00000611273 PHF23Q9BUL5 403 aaPredicted RBP22.63■■□□□ 1.21
FMR1-214ENST00000611273 FOXD1Q16676 465 aa21.59■■□□□ 1.05
FMR1-214ENST00000611273 POTEDQ86YR6 584 aa20.99■□□□□ 0.95
FMR1-214ENST00000611273 PLPPR3Q6T4P5 718 aa20.35■□□□□ 0.85
FMR1-214ENST00000611273 MSH5O43196 834 aa20.29■□□□□ 0.84
FMR1-214ENST00000611273 PIAS4Q8N2W9 510 aaPredicted RBP19.94■□□□□ 0.78
FMR1-214ENST00000611273 ADRA2BP18089 450 aa19.82■□□□□ 0.76
FMR1-214ENST00000611273 PPP6R1Q9UPN7 881 aa19.81■□□□□ 0.76
FMR1-214ENST00000611273 MAPK8IP2Q13387 824 aaPredicted RBP18.24■□□□□ 0.51
FMR1-214ENST00000611273 SCAF1Q9H7N4 1312 aaKnown RBP18.21■□□□□ 0.51
FMR1-214ENST00000611273 DMRT2Q9Y5R5 561 aa18.17■□□□□ 0.5
FMR1-214ENST00000611273 PPP4R3CPQ6ZMV5 832 aa17.84■□□□□ 0.45
FMR1-214ENST00000611273 CACNB1Q02641 598 aaPredicted RBP17.79■□□□□ 0.44
FMR1-214ENST00000611273 DCAF8L1A6NGE4 600 aa17.49■□□□□ 0.39
FMR1-214ENST00000611273 CNKSR2Q8WXI2 1034 aa17.49■□□□□ 0.39
FMR1-214ENST00000611273 RNF39Q9H2S5 420 aa17.36■□□□□ 0.37
FMR1-214ENST00000611273 HOXD11P31277 338 aaPredicted RBP17.35■□□□□ 0.37
FMR1-214ENST00000611273 RNF216Q9NWF9 866 aaPredicted RBP17.28■□□□□ 0.36
FMR1-214ENST00000611273 NCBP3Q53F19 620 aaKnown RBP17.24■□□□□ 0.35
FMR1-214ENST00000611273 C1QBPQ07021 282 aaKnown RBP16.99■□□□□ 0.31
FMR1-214ENST00000611273 NPM3O75607 178 aaKnown RBP16.9■□□□□ 0.3
FMR1-214ENST00000611273 DNAJC5BQ9UF47 199 aa16.74■□□□□ 0.27
FMR1-214ENST00000611273 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.7■□□□□ 0.26
FMR1-214ENST00000611273 KCNA4P22459 653 aa16.65■□□□□ 0.26
FMR1-214ENST00000611273 POTEHQ6S545 545 aa16.27■□□□□ 0.2
FMR1-214ENST00000611273 U3KPZ7 1027 aaPredicted RBP16.24■□□□□ 0.19
FMR1-214ENST00000611273 CAPN15O75808 1086 aa16.09■□□□□ 0.17
FMR1-214ENST00000611273 SLC4A2P04920 1241 aa16.07■□□□□ 0.16
FMR1-214ENST00000611273 DSG3P32926 999 aa16.06■□□□□ 0.16
FMR1-214ENST00000611273 SPINK5Q9NQ38 1064 aaPredicted RBP16.03■□□□□ 0.16
FMR1-214ENST00000611273 APLP2Q06481 763 aa15.92■□□□□ 0.14
FMR1-214ENST00000611273 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.89■□□□□ 0.13
FMR1-214ENST00000611273 HNRNPUL2Q1KMD3 747 aaKnown RBP15.89■□□□□ 0.13
FMR1-214ENST00000611273 TRHP20396 242 aaPredicted RBP15.85■□□□□ 0.13
FMR1-214ENST00000611273 SAMD1Q6SPF0 538 aaPredicted RBP15.79■□□□□ 0.12
FMR1-214ENST00000611273 SLC4A1APQ9BWU0 796 aaKnown RBP15.78■□□□□ 0.12
FMR1-214ENST00000611273 ZNF219Q9P2Y4 722 aaPredicted RBP15.77■□□□□ 0.12
FMR1-214ENST00000611273 ABCB7O75027 752 aa15.7■□□□□ 0.1
FMR1-214ENST00000611273 MYCNP04198 464 aaPredicted RBP15.68■□□□□ 0.1
FMR1-214ENST00000611273 FOXD4L1Q9NU39 408 aa15.54■□□□□ 0.08
FMR1-214ENST00000611273 POLA2Q14181 598 aa15.37■□□□□ 0.05
FMR1-214ENST00000611273 ZBTB22O15209 634 aa15.24■□□□□ 0.03
FMR1-214ENST00000611273 ATF5Q9Y2D1 282 aaPredicted RBP15.24■□□□□ 0.03
FMR1-214ENST00000611273 CHRDL2Q6WN34 429 aa15.2■□□□□ 0.02
FMR1-214ENST00000611273 RBM42Q9BTD8 480 aaKnown RBP15.2■□□□□ 0.02
FMR1-214ENST00000611273 ZBTB12Q9Y330 459 aaPredicted RBP15.09■□□□□ 0.01
FMR1-214ENST00000611273 ATXN8OSP0DMR3 200 aa15.01□□□□□ -0.01
FMR1-214ENST00000611273 SP7Q8TDD2 431 aaPredicted RBP14.96□□□□□ -0.01
FMR1-214ENST00000611273 OSCARQ8IYS5 282 aa14.88□□□□□ -0.03
FMR1-214ENST00000611273 AKT1S1Q96B36 256 aa14.82□□□□□ -0.04
FMR1-214ENST00000611273 FBLN2P98095 1184 aa14.78□□□□□ -0.04
FMR1-214ENST00000611273 PIP4P2Q8N4L2 257 aa14.75□□□□□ -0.05
FMR1-214ENST00000611273 REM2Q8IYK8 340 aaPredicted RBP14.68□□□□□ -0.06
FMR1-214ENST00000611273 CSRNP3Q8WYN3 585 aa14.61□□□□□ -0.07
FMR1-214ENST00000611273 EHMT2Q96KQ7 1210 aa14.61□□□□□ -0.07
FMR1-214ENST00000611273 SPDYE2BA6NHP3 402 aa14.59□□□□□ -0.07
FMR1-214ENST00000611273 SPDYE6P0CI01 402 aa14.59□□□□□ -0.07
FMR1-214ENST00000611273 SPDYE2Q495Y8 402 aa14.59□□□□□ -0.07
FMR1-214ENST00000611273 PITPNM1O00562 1244 aa14.57□□□□□ -0.08
FMR1-214ENST00000611273 FXR2P51116 673 aaKnown RBP eCLIP14.56□□□□□ -0.08
FMR1-214ENST00000611273 HAX1O00165 279 aa14.54□□□□□ -0.08
FMR1-214ENST00000611273 MKRN4PQ13434 485 aaPredicted RBP14.52□□□□□ -0.09
FMR1-214ENST00000611273 EVX2Q03828 476 aa14.51□□□□□ -0.09
FMR1-214ENST00000611273 ZNF692Q9BU19 519 aaPredicted RBP14.48□□□□□ -0.09
FMR1-214ENST00000611273 CLEC11AQ9Y240 323 aa14.4□□□□□ -0.1
FMR1-214ENST00000611273 SPDYE1Q8NFV5 336 aaPredicted RBP14.36□□□□□ -0.11
FMR1-214ENST00000611273 SSUH2Q9Y2M2 353 aa14.34□□□□□ -0.11
FMR1-214ENST00000611273 PABPN1Q86U42 306 aaKnown RBP eCLIP14.24□□□□□ -0.13
FMR1-214ENST00000611273 PRKAR2AP13861 404 aaKnown RBP14.2□□□□□ -0.14
FMR1-214ENST00000611273 PRR29P0C7W0 189 aa14.13□□□□□ -0.15
FMR1-214ENST00000611273 C19orf67A6NJJ6 358 aa14.11□□□□□ -0.15
FMR1-214ENST00000611273 CHADLQ6NUI6 762 aa14.05□□□□□ -0.16
FMR1-214ENST00000611273 GABBR2O75899 941 aa14.04□□□□□ -0.16
FMR1-214ENST00000611273 LHX8Q68G74 356 aa14.01□□□□□ -0.17
FMR1-214ENST00000611273 SPDYE4A6NLX3 237 aa13.98□□□□□ -0.17
FMR1-214ENST00000611273 STAG3Q9UJ98 1225 aa13.88□□□□□ -0.19
FMR1-214ENST00000611273 POTEIP0CG38 1075 aa13.84□□□□□ -0.19
FMR1-214ENST00000611273 FARP1Q9Y4F1 1045 aaPredicted RBP13.81□□□□□ -0.2
FMR1-214ENST00000611273 CD44P16070 742 aaKnown RBP13.76□□□□□ -0.21
FMR1-214ENST00000611273 CREBZFQ9NS37 354 aa13.69□□□□□ -0.22
FMR1-214ENST00000611273 ZRANB1Q9UGI0 708 aa13.59□□□□□ -0.23
FMR1-214ENST00000611273 PLSCR2Q9NRY7 297 aa13.57□□□□□ -0.24
FMR1-214ENST00000611273 PAK3O75914 559 aaPredicted RBP13.56□□□□□ -0.24
FMR1-214ENST00000611273 NPM1P06748 294 aaKnown RBP eCLIP13.55□□□□□ -0.24
FMR1-214ENST00000611273 CLCN6P51797 869 aa13.5□□□□□ -0.25
FMR1-214ENST00000611273 PROM2Q8N271 834 aa13.48□□□□□ -0.25
FMR1-214ENST00000611273 ZNF579Q8NAF0 562 aaKnown RBP13.48□□□□□ -0.25
FMR1-214ENST00000611273 DCBLD2Q96PD2 775 aa13.45□□□□□ -0.26
FMR1-214ENST00000611273 PLEKHG5O94827 1062 aa13.44□□□□□ -0.26
FMR1-214ENST00000611273 MNX1P50219 401 aaPredicted RBP13.4□□□□□ -0.26
FMR1-214ENST00000611273 OTUD5Q96G74 571 aa13.4□□□□□ -0.26
FMR1-214ENST00000611273 POTEB2H3BUK9 544 aa13.38□□□□□ -0.27
FMR1-214ENST00000611273 MIER1Q8N108 512 aa13.38□□□□□ -0.27
FMR1-214ENST00000611273 FKBP8Q14318 412 aa13.37□□□□□ -0.27
FMR1-214ENST00000611273 PHF12Q96QT6 1004 aa13.37□□□□□ -0.27
FMR1-214ENST00000611273 GALR2O43603 387 aaPredicted RBP13.34□□□□□ -0.27
FMR1-214ENST00000611273 PLCD3Q8N3E9 789 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms