RNA–Protein interactions for RNA: ENST00000610335.4

LINC02340-201, Transcript of long intergenic non-protein coding RNA 2340, humanhuman

TSL 3 BASIC

Gene LINC02340, Length 626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02340-201ENST00000610335 AEBP2Q6ZN18 517 aaPredicted RBP27.11■■□□□ 1.93
LINC02340-201ENST00000610335 CHIC1Q5VXU3 224 aa25.14■■□□□ 1.62
LINC02340-201ENST00000610335 SENP3Q9H4L4 574 aaPredicted RBP23.05■■□□□ 1.28
LINC02340-201ENST00000610335 PHF23Q9BUL5 403 aaPredicted RBP22.73■■□□□ 1.23
LINC02340-201ENST00000610335 FOXD1Q16676 465 aa21.68■■□□□ 1.06
LINC02340-201ENST00000610335 POTEDQ86YR6 584 aa21.08■□□□□ 0.97
LINC02340-201ENST00000610335 MSH5O43196 834 aa20.37■□□□□ 0.85
LINC02340-201ENST00000610335 PIAS4Q8N2W9 510 aaPredicted RBP20.09■□□□□ 0.81
LINC02340-201ENST00000610335 PLPPR3Q6T4P5 718 aa20.08■□□□□ 0.81
LINC02340-201ENST00000610335 PPP6R1Q9UPN7 881 aa19.86■□□□□ 0.77
LINC02340-201ENST00000610335 ADRA2BP18089 450 aa19.75■□□□□ 0.75
LINC02340-201ENST00000610335 MAPK8IP2Q13387 824 aaPredicted RBP18.35■□□□□ 0.53
LINC02340-201ENST00000610335 DMRT2Q9Y5R5 561 aa18.21■□□□□ 0.51
LINC02340-201ENST00000610335 CACNB1Q02641 598 aaPredicted RBP17.95■□□□□ 0.46
LINC02340-201ENST00000610335 SCAF1Q9H7N4 1312 aaKnown RBP17.83■□□□□ 0.44
LINC02340-201ENST00000610335 PPP4R3CPQ6ZMV5 832 aa17.62■□□□□ 0.41
LINC02340-201ENST00000610335 DCAF8L1A6NGE4 600 aa17.6■□□□□ 0.41
LINC02340-201ENST00000610335 RNF39Q9H2S5 420 aa17.4■□□□□ 0.38
LINC02340-201ENST00000610335 HOXD11P31277 338 aaPredicted RBP17.28■□□□□ 0.36
LINC02340-201ENST00000610335 CNKSR2Q8WXI2 1034 aa17.22■□□□□ 0.35
LINC02340-201ENST00000610335 NCBP3Q53F19 620 aaKnown RBP17.12■□□□□ 0.33
LINC02340-201ENST00000610335 C1QBPQ07021 282 aaKnown RBP17.03■□□□□ 0.32
LINC02340-201ENST00000610335 RNF216Q9NWF9 866 aaPredicted RBP16.97■□□□□ 0.31
LINC02340-201ENST00000610335 KCNA4P22459 653 aa16.87■□□□□ 0.29
LINC02340-201ENST00000610335 NPM3O75607 178 aaKnown RBP16.83■□□□□ 0.28
LINC02340-201ENST00000610335 DNAJC5BQ9UF47 199 aa16.64■□□□□ 0.25
LINC02340-201ENST00000610335 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.5■□□□□ 0.23
LINC02340-201ENST00000610335 POTEHQ6S545 545 aa16.37■□□□□ 0.21
LINC02340-201ENST00000610335 SPINK5Q9NQ38 1064 aaPredicted RBP16.15■□□□□ 0.18
LINC02340-201ENST00000610335 U3KPZ7 1027 aaPredicted RBP16.14■□□□□ 0.17
LINC02340-201ENST00000610335 DSG3P32926 999 aa16.12■□□□□ 0.17
LINC02340-201ENST00000610335 CAPN15O75808 1086 aa16.08■□□□□ 0.16
LINC02340-201ENST00000610335 SLC4A1APQ9BWU0 796 aaKnown RBP16.04■□□□□ 0.16
LINC02340-201ENST00000610335 SLC4A2P04920 1241 aa15.95■□□□□ 0.14
LINC02340-201ENST00000610335 ABCB7O75027 752 aa15.74■□□□□ 0.11
LINC02340-201ENST00000610335 TRHP20396 242 aaPredicted RBP15.7■□□□□ 0.1
LINC02340-201ENST00000610335 FOXD4L1Q9NU39 408 aa15.66■□□□□ 0.1
LINC02340-201ENST00000610335 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.62■□□□□ 0.09
LINC02340-201ENST00000610335 HNRNPUL2Q1KMD3 747 aaKnown RBP15.62■□□□□ 0.09
LINC02340-201ENST00000610335 MYCNP04198 464 aaPredicted RBP15.61■□□□□ 0.09
LINC02340-201ENST00000610335 APLP2Q06481 763 aa15.55■□□□□ 0.08
LINC02340-201ENST00000610335 SAMD1Q6SPF0 538 aaPredicted RBP15.54■□□□□ 0.08
LINC02340-201ENST00000610335 ZBTB22O15209 634 aa15.52■□□□□ 0.08
LINC02340-201ENST00000610335 ZNF219Q9P2Y4 722 aaPredicted RBP15.51■□□□□ 0.07
LINC02340-201ENST00000610335 CHRDL2Q6WN34 429 aa15.29■□□□□ 0.04
LINC02340-201ENST00000610335 RBM42Q9BTD8 480 aaKnown RBP15.26■□□□□ 0.03
LINC02340-201ENST00000610335 EHMT2Q96KQ7 1210 aa15.2■□□□□ 0.02
LINC02340-201ENST00000610335 CSRNP3Q8WYN3 585 aa15.18■□□□□ 0.02
LINC02340-201ENST00000610335 ATXN8OSP0DMR3 200 aa15.17■□□□□ 0.02
LINC02340-201ENST00000610335 ATF5Q9Y2D1 282 aaPredicted RBP15.12■□□□□ 0.01
LINC02340-201ENST00000610335 POLA2Q14181 598 aa15.1■□□□□ 0.01
LINC02340-201ENST00000610335 SP7Q8TDD2 431 aaPredicted RBP15.04■□□□□ -0
LINC02340-201ENST00000610335 PIP4P2Q8N4L2 257 aa14.83□□□□□ -0.04
LINC02340-201ENST00000610335 AKT1S1Q96B36 256 aa14.82□□□□□ -0.04
LINC02340-201ENST00000610335 ZBTB12Q9Y330 459 aaPredicted RBP14.81□□□□□ -0.04
LINC02340-201ENST00000610335 REM2Q8IYK8 340 aaPredicted RBP14.76□□□□□ -0.05
LINC02340-201ENST00000610335 OSCARQ8IYS5 282 aa14.71□□□□□ -0.05
LINC02340-201ENST00000610335 HAX1O00165 279 aa14.7□□□□□ -0.06
LINC02340-201ENST00000610335 PITPNM1O00562 1244 aa14.65□□□□□ -0.06
LINC02340-201ENST00000610335 EVX2Q03828 476 aa14.59□□□□□ -0.07
LINC02340-201ENST00000610335 FXR2P51116 673 aaKnown RBP eCLIP14.58□□□□□ -0.08
LINC02340-201ENST00000610335 FBLN2P98095 1184 aa14.58□□□□□ -0.08
LINC02340-201ENST00000610335 MKRN4PQ13434 485 aaPredicted RBP14.48□□□□□ -0.09
LINC02340-201ENST00000610335 SPDYE2BA6NHP3 402 aa14.35□□□□□ -0.11
LINC02340-201ENST00000610335 SPDYE6P0CI01 402 aa14.35□□□□□ -0.11
LINC02340-201ENST00000610335 SPDYE2Q495Y8 402 aa14.35□□□□□ -0.11
LINC02340-201ENST00000610335 PRKAR2AP13861 404 aaKnown RBP14.25□□□□□ -0.13
LINC02340-201ENST00000610335 SSUH2Q9Y2M2 353 aa14.21□□□□□ -0.13
LINC02340-201ENST00000610335 ZNF692Q9BU19 519 aaPredicted RBP14.19□□□□□ -0.14
LINC02340-201ENST00000610335 CLEC11AQ9Y240 323 aa14.18□□□□□ -0.14
LINC02340-201ENST00000610335 C19orf67A6NJJ6 358 aa14.14□□□□□ -0.15
LINC02340-201ENST00000610335 GABBR2O75899 941 aa14.12□□□□□ -0.15
LINC02340-201ENST00000610335 LHX8Q68G74 356 aa14.09□□□□□ -0.15
LINC02340-201ENST00000610335 SPDYE1Q8NFV5 336 aaPredicted RBP14.05□□□□□ -0.16
LINC02340-201ENST00000610335 CHADLQ6NUI6 762 aa14.04□□□□□ -0.16
LINC02340-201ENST00000610335 SPDYE4A6NLX3 237 aa14.03□□□□□ -0.16
LINC02340-201ENST00000610335 PABPN1Q86U42 306 aaKnown RBP eCLIP14□□□□□ -0.17
LINC02340-201ENST00000610335 POTEIP0CG38 1075 aa13.88□□□□□ -0.19
LINC02340-201ENST00000610335 PROM2Q8N271 834 aa13.81□□□□□ -0.2
LINC02340-201ENST00000610335 PLSCR2Q9NRY7 297 aa13.8□□□□□ -0.2
LINC02340-201ENST00000610335 PRR29P0C7W0 189 aa13.78□□□□□ -0.2
LINC02340-201ENST00000610335 CD44P16070 742 aaKnown RBP13.76□□□□□ -0.21
LINC02340-201ENST00000610335 STAG3Q9UJ98 1225 aa13.76□□□□□ -0.21
LINC02340-201ENST00000610335 FKBP8Q14318 412 aa13.75□□□□□ -0.21
LINC02340-201ENST00000610335 FARP1Q9Y4F1 1045 aaPredicted RBP13.65□□□□□ -0.22
LINC02340-201ENST00000610335 DCBLD2Q96PD2 775 aa13.57□□□□□ -0.24
LINC02340-201ENST00000610335 CREBZFQ9NS37 354 aa13.5□□□□□ -0.25
LINC02340-201ENST00000610335 ZNF579Q8NAF0 562 aaKnown RBP13.46□□□□□ -0.25
LINC02340-201ENST00000610335 ZRANB1Q9UGI0 708 aa13.46□□□□□ -0.25
LINC02340-201ENST00000610335 OTUD5Q96G74 571 aa13.45□□□□□ -0.26
LINC02340-201ENST00000610335 POTEB2H3BUK9 544 aa13.44□□□□□ -0.26
LINC02340-201ENST00000610335 GALR2O43603 387 aaPredicted RBP13.44□□□□□ -0.26
LINC02340-201ENST00000610335 CLCN6P51797 869 aa13.43□□□□□ -0.26
LINC02340-201ENST00000610335 FBXO3Q9UK99 471 aa13.4□□□□□ -0.26
LINC02340-201ENST00000610335 POTEMA6NI47 508 aa13.34□□□□□ -0.27
LINC02340-201ENST00000610335 MNX1P50219 401 aaPredicted RBP13.33□□□□□ -0.28
LINC02340-201ENST00000610335 PLEKHG5O94827 1062 aa13.32□□□□□ -0.28
LINC02340-201ENST00000610335 MIER1Q8N108 512 aa13.3□□□□□ -0.28
LINC02340-201ENST00000610335 PHF12Q96QT6 1004 aa13.3□□□□□ -0.28
LINC02340-201ENST00000610335 NPM1P06748 294 aaKnown RBP eCLIP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms