RNA–Protein interactions for RNA: ENST00000608088.1

AC097504.2-201, humanhuman

BASIC

Gene AC097504.2, Length 454 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC097504.2-201ENST00000608088 AEBP2Q6ZN18 517 aaPredicted RBP30.97■■■□□ 2.55
AC097504.2-201ENST00000608088 CHIC1Q5VXU3 224 aa29.72■■■□□ 2.35
AC097504.2-201ENST00000608088 SENP3Q9H4L4 574 aaPredicted RBP26.21■■□□□ 1.79
AC097504.2-201ENST00000608088 PHF23Q9BUL5 403 aaPredicted RBP26.16■■□□□ 1.78
AC097504.2-201ENST00000608088 FOXD1Q16676 465 aa24.47■■□□□ 1.51
AC097504.2-201ENST00000608088 PLPPR3Q6T4P5 718 aa23.89■■□□□ 1.41
AC097504.2-201ENST00000608088 PPP6R1Q9UPN7 881 aa23.25■■□□□ 1.31
AC097504.2-201ENST00000608088 ADRA2BP18089 450 aa23.19■■□□□ 1.3
AC097504.2-201ENST00000608088 PIAS4Q8N2W9 510 aaPredicted RBP22.94■■□□□ 1.26
AC097504.2-201ENST00000608088 MSH5O43196 834 aa22.63■■□□□ 1.21
AC097504.2-201ENST00000608088 POTEDQ86YR6 584 aa21.49■■□□□ 1.03
AC097504.2-201ENST00000608088 MAPK8IP2Q13387 824 aaPredicted RBP21.2■□□□□ 0.98
AC097504.2-201ENST00000608088 PPP4R3CPQ6ZMV5 832 aa21.05■□□□□ 0.96
AC097504.2-201ENST00000608088 SCAF1Q9H7N4 1312 aaKnown RBP21.04■□□□□ 0.96
AC097504.2-201ENST00000608088 DMRT2Q9Y5R5 561 aa20.88■□□□□ 0.93
AC097504.2-201ENST00000608088 CNKSR2Q8WXI2 1034 aa20.5■□□□□ 0.87
AC097504.2-201ENST00000608088 KCNA4P22459 653 aa20.27■□□□□ 0.84
AC097504.2-201ENST00000608088 HOXD11P31277 338 aaPredicted RBP20.26■□□□□ 0.83
AC097504.2-201ENST00000608088 NCBP3Q53F19 620 aaKnown RBP20.26■□□□□ 0.83
AC097504.2-201ENST00000608088 RNF216Q9NWF9 866 aaPredicted RBP20.2■□□□□ 0.82
AC097504.2-201ENST00000608088 NPM3O75607 178 aaKnown RBP20.1■□□□□ 0.81
AC097504.2-201ENST00000608088 DCAF8L1A6NGE4 600 aa20.06■□□□□ 0.8
AC097504.2-201ENST00000608088 DNAJC5BQ9UF47 199 aa19.43■□□□□ 0.7
AC097504.2-201ENST00000608088 RNF39Q9H2S5 420 aa19.4■□□□□ 0.7
AC097504.2-201ENST00000608088 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.32■□□□□ 0.68
AC097504.2-201ENST00000608088 SLC4A1APQ9BWU0 796 aaKnown RBP19.25■□□□□ 0.67
AC097504.2-201ENST00000608088 CACNB1Q02641 598 aaPredicted RBP19.23■□□□□ 0.67
AC097504.2-201ENST00000608088 SLC4A2P04920 1241 aa19.1■□□□□ 0.65
AC097504.2-201ENST00000608088 C1QBPQ07021 282 aaKnown RBP19.09■□□□□ 0.65
AC097504.2-201ENST00000608088 U3KPZ7 1027 aaPredicted RBP19.01■□□□□ 0.63
AC097504.2-201ENST00000608088 ZBTB22O15209 634 aa18.71■□□□□ 0.59
AC097504.2-201ENST00000608088 EHMT2Q96KQ7 1210 aa18.65■□□□□ 0.58
AC097504.2-201ENST00000608088 SPINK5Q9NQ38 1064 aaPredicted RBP18.65■□□□□ 0.58
AC097504.2-201ENST00000608088 FOXD4L1Q9NU39 408 aa18.63■□□□□ 0.57
AC097504.2-201ENST00000608088 CAPN15O75808 1086 aa18.54■□□□□ 0.56
AC097504.2-201ENST00000608088 CSRNP3Q8WYN3 585 aa18.54■□□□□ 0.56
AC097504.2-201ENST00000608088 MYCNP04198 464 aaPredicted RBP18.51■□□□□ 0.55
AC097504.2-201ENST00000608088 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.46■□□□□ 0.55
AC097504.2-201ENST00000608088 HNRNPUL2Q1KMD3 747 aaKnown RBP18.46■□□□□ 0.55
AC097504.2-201ENST00000608088 SAMD1Q6SPF0 538 aaPredicted RBP18.42■□□□□ 0.54
AC097504.2-201ENST00000608088 TRHP20396 242 aaPredicted RBP18.36■□□□□ 0.53
AC097504.2-201ENST00000608088 APLP2Q06481 763 aa18.35■□□□□ 0.53
AC097504.2-201ENST00000608088 DSG3P32926 999 aa18.33■□□□□ 0.52
AC097504.2-201ENST00000608088 ZNF219Q9P2Y4 722 aaPredicted RBP18.25■□□□□ 0.51
AC097504.2-201ENST00000608088 ABCB7O75027 752 aa18.21■□□□□ 0.51
AC097504.2-201ENST00000608088 ATF5Q9Y2D1 282 aaPredicted RBP18.18■□□□□ 0.5
AC097504.2-201ENST00000608088 ATXN8OSP0DMR3 200 aa17.98■□□□□ 0.47
AC097504.2-201ENST00000608088 POLA2Q14181 598 aa17.94■□□□□ 0.46
AC097504.2-201ENST00000608088 ZBTB12Q9Y330 459 aaPredicted RBP17.5■□□□□ 0.39
AC097504.2-201ENST00000608088 OSCARQ8IYS5 282 aa17.4■□□□□ 0.38
AC097504.2-201ENST00000608088 RBM42Q9BTD8 480 aaKnown RBP17.38■□□□□ 0.37
AC097504.2-201ENST00000608088 MKRN4PQ13434 485 aaPredicted RBP17.34■□□□□ 0.37
AC097504.2-201ENST00000608088 FBLN2P98095 1184 aa17.29■□□□□ 0.36
AC097504.2-201ENST00000608088 AKT1S1Q96B36 256 aa17.11■□□□□ 0.33
AC097504.2-201ENST00000608088 SPDYE2BA6NHP3 402 aa17.04■□□□□ 0.32
AC097504.2-201ENST00000608088 SPDYE6P0CI01 402 aa17.04■□□□□ 0.32
AC097504.2-201ENST00000608088 SPDYE2Q495Y8 402 aa17.04■□□□□ 0.32
AC097504.2-201ENST00000608088 REM2Q8IYK8 340 aaPredicted RBP17■□□□□ 0.31
AC097504.2-201ENST00000608088 ZNF692Q9BU19 519 aaPredicted RBP16.94■□□□□ 0.3
AC097504.2-201ENST00000608088 CHRDL2Q6WN34 429 aa16.91■□□□□ 0.3
AC097504.2-201ENST00000608088 POTEHQ6S545 545 aa16.9■□□□□ 0.3
AC097504.2-201ENST00000608088 SSUH2Q9Y2M2 353 aa16.9■□□□□ 0.3
AC097504.2-201ENST00000608088 PITPNM1O00562 1244 aa16.84■□□□□ 0.29
AC097504.2-201ENST00000608088 PABPN1Q86U42 306 aaKnown RBP eCLIP16.73■□□□□ 0.27
AC097504.2-201ENST00000608088 SPDYE4A6NLX3 237 aa16.7■□□□□ 0.26
AC097504.2-201ENST00000608088 FKBP8Q14318 412 aa16.69■□□□□ 0.26
AC097504.2-201ENST00000608088 CLEC11AQ9Y240 323 aa16.67■□□□□ 0.26
AC097504.2-201ENST00000608088 SPDYE1Q8NFV5 336 aaPredicted RBP16.64■□□□□ 0.25
AC097504.2-201ENST00000608088 PIP4P2Q8N4L2 257 aa16.63■□□□□ 0.25
AC097504.2-201ENST00000608088 FXR2P51116 673 aaKnown RBP eCLIP16.57■□□□□ 0.24
AC097504.2-201ENST00000608088 PROM2Q8N271 834 aa16.53■□□□□ 0.24
AC097504.2-201ENST00000608088 PRR29P0C7W0 189 aa16.4■□□□□ 0.22
AC097504.2-201ENST00000608088 PRKAR2AP13861 404 aaKnown RBP16.39■□□□□ 0.21
AC097504.2-201ENST00000608088 CHADLQ6NUI6 762 aa16.37■□□□□ 0.21
AC097504.2-201ENST00000608088 STAG3Q9UJ98 1225 aa16.25■□□□□ 0.19
AC097504.2-201ENST00000608088 HAX1O00165 279 aa16.19■□□□□ 0.18
AC097504.2-201ENST00000608088 CREBZFQ9NS37 354 aa16.15■□□□□ 0.18
AC097504.2-201ENST00000608088 EVX2Q03828 476 aa16.12■□□□□ 0.17
AC097504.2-201ENST00000608088 FARP1Q9Y4F1 1045 aaPredicted RBP16.08■□□□□ 0.16
AC097504.2-201ENST00000608088 FBXO3Q9UK99 471 aa16.06■□□□□ 0.16
AC097504.2-201ENST00000608088 C19orf67A6NJJ6 358 aa16.03■□□□□ 0.16
AC097504.2-201ENST00000608088 SP7Q8TDD2 431 aaPredicted RBP16.02■□□□□ 0.16
AC097504.2-201ENST00000608088 MNX1P50219 401 aaPredicted RBP15.93■□□□□ 0.14
AC097504.2-201ENST00000608088 VASPP50552 380 aaPredicted RBP15.91■□□□□ 0.14
AC097504.2-201ENST00000608088 CD44P16070 742 aaKnown RBP15.89■□□□□ 0.13
AC097504.2-201ENST00000608088 MIER1Q8N108 512 aa15.84■□□□□ 0.13
AC097504.2-201ENST00000608088 PLCD3Q8N3E9 789 aa15.77■□□□□ 0.12
AC097504.2-201ENST00000608088 NPM1P06748 294 aaKnown RBP eCLIP15.76■□□□□ 0.11
AC097504.2-201ENST00000608088 ZRANB1Q9UGI0 708 aa15.74■□□□□ 0.11
AC097504.2-201ENST00000608088 IFNLR1Q8IU57 520 aaPredicted RBP15.72■□□□□ 0.11
AC097504.2-201ENST00000608088 GABBR2O75899 941 aa15.71■□□□□ 0.11
AC097504.2-201ENST00000608088 PLEKHG5O94827 1062 aa15.7■□□□□ 0.1
AC097504.2-201ENST00000608088 ZNF579Q8NAF0 562 aaKnown RBP15.64■□□□□ 0.09
AC097504.2-201ENST00000608088 PAK3O75914 559 aaPredicted RBP15.61■□□□□ 0.09
AC097504.2-201ENST00000608088 PHF12Q96QT6 1004 aa15.61■□□□□ 0.09
AC097504.2-201ENST00000608088 TSPYL2Q9H2G4 693 aaPredicted RBP15.6■□□□□ 0.09
AC097504.2-201ENST00000608088 RASEFQ8IZ41 740 aa15.58■□□□□ 0.08
AC097504.2-201ENST00000608088 ZBTB47Q9UFB7 747 aaPredicted RBP15.57■□□□□ 0.08
AC097504.2-201ENST00000608088 KLHL34Q8N239 644 aa15.54■□□□□ 0.08
AC097504.2-201ENST00000608088 NUBP1P53384 320 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms