RNA–Protein interactions for RNA: ENST00000607339.1

UCHL3-205, Transcript of ubiquitin C-terminal hydrolase L3, humanhuman

TSL 2

Gene UCHL3, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UCHL3-205ENST00000607339 AEBP2Q6ZN18 517 aaPredicted RBP29.31■■■□□ 2.28
UCHL3-205ENST00000607339 CHIC1Q5VXU3 224 aa28.22■■■□□ 2.11
UCHL3-205ENST00000607339 SENP3Q9H4L4 574 aaPredicted RBP25.29■■□□□ 1.64
UCHL3-205ENST00000607339 PHF23Q9BUL5 403 aaPredicted RBP24.82■■□□□ 1.56
UCHL3-205ENST00000607339 FOXD1Q16676 465 aa23.32■■□□□ 1.32
UCHL3-205ENST00000607339 PLPPR3Q6T4P5 718 aa22.76■■□□□ 1.23
UCHL3-205ENST00000607339 POTEDQ86YR6 584 aa22.15■■□□□ 1.14
UCHL3-205ENST00000607339 MSH5O43196 834 aa22.05■■□□□ 1.12
UCHL3-205ENST00000607339 PIAS4Q8N2W9 510 aaPredicted RBP21.96■■□□□ 1.11
UCHL3-205ENST00000607339 ADRA2BP18089 450 aa21.84■■□□□ 1.09
UCHL3-205ENST00000607339 PPP6R1Q9UPN7 881 aa21.83■■□□□ 1.09
UCHL3-205ENST00000607339 SCAF1Q9H7N4 1312 aaKnown RBP20.35■□□□□ 0.85
UCHL3-205ENST00000607339 DMRT2Q9Y5R5 561 aa20.01■□□□□ 0.79
UCHL3-205ENST00000607339 MAPK8IP2Q13387 824 aaPredicted RBP19.93■□□□□ 0.78
UCHL3-205ENST00000607339 PPP4R3CPQ6ZMV5 832 aa19.86■□□□□ 0.77
UCHL3-205ENST00000607339 CNKSR2Q8WXI2 1034 aa19.54■□□□□ 0.72
UCHL3-205ENST00000607339 NCBP3Q53F19 620 aaKnown RBP19.38■□□□□ 0.69
UCHL3-205ENST00000607339 HOXD11P31277 338 aaPredicted RBP19.35■□□□□ 0.69
UCHL3-205ENST00000607339 RNF216Q9NWF9 866 aaPredicted RBP19.31■□□□□ 0.68
UCHL3-205ENST00000607339 DCAF8L1A6NGE4 600 aa19.17■□□□□ 0.66
UCHL3-205ENST00000607339 CACNB1Q02641 598 aaPredicted RBP19.15■□□□□ 0.66
UCHL3-205ENST00000607339 NPM3O75607 178 aaKnown RBP18.84■□□□□ 0.61
UCHL3-205ENST00000607339 DNAJC5BQ9UF47 199 aa18.83■□□□□ 0.6
UCHL3-205ENST00000607339 RNF39Q9H2S5 420 aa18.71■□□□□ 0.59
UCHL3-205ENST00000607339 KCNA4P22459 653 aa18.6■□□□□ 0.57
UCHL3-205ENST00000607339 C1QBPQ07021 282 aaKnown RBP18.53■□□□□ 0.56
UCHL3-205ENST00000607339 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.49■□□□□ 0.55
UCHL3-205ENST00000607339 U3KPZ7 1027 aaPredicted RBP17.99■□□□□ 0.47
UCHL3-205ENST00000607339 APLP2Q06481 763 aa17.92■□□□□ 0.46
UCHL3-205ENST00000607339 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.88■□□□□ 0.45
UCHL3-205ENST00000607339 HNRNPUL2Q1KMD3 747 aaKnown RBP17.88■□□□□ 0.45
UCHL3-205ENST00000607339 SLC4A2P04920 1241 aa17.87■□□□□ 0.45
UCHL3-205ENST00000607339 SLC4A1APQ9BWU0 796 aaKnown RBP17.73■□□□□ 0.43
UCHL3-205ENST00000607339 CAPN15O75808 1086 aa17.72■□□□□ 0.43
UCHL3-205ENST00000607339 SAMD1Q6SPF0 538 aaPredicted RBP17.71■□□□□ 0.43
UCHL3-205ENST00000607339 SPINK5Q9NQ38 1064 aaPredicted RBP17.6■□□□□ 0.41
UCHL3-205ENST00000607339 ZNF219Q9P2Y4 722 aaPredicted RBP17.6■□□□□ 0.41
UCHL3-205ENST00000607339 MYCNP04198 464 aaPredicted RBP17.59■□□□□ 0.41
UCHL3-205ENST00000607339 DSG3P32926 999 aa17.51■□□□□ 0.39
UCHL3-205ENST00000607339 FOXD4L1Q9NU39 408 aa17.47■□□□□ 0.39
UCHL3-205ENST00000607339 TRHP20396 242 aaPredicted RBP17.44■□□□□ 0.38
UCHL3-205ENST00000607339 POTEHQ6S545 545 aa17.3■□□□□ 0.36
UCHL3-205ENST00000607339 ABCB7O75027 752 aa17.21■□□□□ 0.35
UCHL3-205ENST00000607339 ZBTB22O15209 634 aa17.01■□□□□ 0.31
UCHL3-205ENST00000607339 ATXN8OSP0DMR3 200 aa17.01■□□□□ 0.31
UCHL3-205ENST00000607339 POLA2Q14181 598 aa17.01■□□□□ 0.31
UCHL3-205ENST00000607339 ZBTB12Q9Y330 459 aaPredicted RBP16.97■□□□□ 0.31
UCHL3-205ENST00000607339 RBM42Q9BTD8 480 aaKnown RBP16.96■□□□□ 0.31
UCHL3-205ENST00000607339 ATF5Q9Y2D1 282 aaPredicted RBP16.85■□□□□ 0.29
UCHL3-205ENST00000607339 FBLN2P98095 1184 aa16.56■□□□□ 0.24
UCHL3-205ENST00000607339 AKT1S1Q96B36 256 aa16.51■□□□□ 0.23
UCHL3-205ENST00000607339 CSRNP3Q8WYN3 585 aa16.47■□□□□ 0.23
UCHL3-205ENST00000607339 OSCARQ8IYS5 282 aa16.45■□□□□ 0.22
UCHL3-205ENST00000607339 CHRDL2Q6WN34 429 aa16.43■□□□□ 0.22
UCHL3-205ENST00000607339 EHMT2Q96KQ7 1210 aa16.4■□□□□ 0.22
UCHL3-205ENST00000607339 SPDYE2BA6NHP3 402 aa16.34■□□□□ 0.21
UCHL3-205ENST00000607339 SPDYE6P0CI01 402 aa16.34■□□□□ 0.21
UCHL3-205ENST00000607339 SPDYE2Q495Y8 402 aa16.34■□□□□ 0.21
UCHL3-205ENST00000607339 REM2Q8IYK8 340 aaPredicted RBP16.23■□□□□ 0.19
UCHL3-205ENST00000607339 MKRN4PQ13434 485 aaPredicted RBP16.15■□□□□ 0.18
UCHL3-205ENST00000607339 ZNF692Q9BU19 519 aaPredicted RBP16.1■□□□□ 0.17
UCHL3-205ENST00000607339 SSUH2Q9Y2M2 353 aa16.04■□□□□ 0.16
UCHL3-205ENST00000607339 PITPNM1O00562 1244 aa16.03■□□□□ 0.16
UCHL3-205ENST00000607339 SP7Q8TDD2 431 aaPredicted RBP16.03■□□□□ 0.16
UCHL3-205ENST00000607339 SPDYE1Q8NFV5 336 aaPredicted RBP16.01■□□□□ 0.15
UCHL3-205ENST00000607339 PIP4P2Q8N4L2 257 aa15.91■□□□□ 0.14
UCHL3-205ENST00000607339 FXR2P51116 673 aaKnown RBP eCLIP15.89■□□□□ 0.13
UCHL3-205ENST00000607339 CLEC11AQ9Y240 323 aa15.85■□□□□ 0.13
UCHL3-205ENST00000607339 PABPN1Q86U42 306 aaKnown RBP eCLIP15.82■□□□□ 0.12
UCHL3-205ENST00000607339 HAX1O00165 279 aa15.79■□□□□ 0.12
UCHL3-205ENST00000607339 PRR29P0C7W0 189 aa15.68■□□□□ 0.1
UCHL3-205ENST00000607339 PRKAR2AP13861 404 aaKnown RBP15.66■□□□□ 0.1
UCHL3-205ENST00000607339 SPDYE4A6NLX3 237 aa15.65■□□□□ 0.1
UCHL3-205ENST00000607339 STAG3Q9UJ98 1225 aa15.64■□□□□ 0.09
UCHL3-205ENST00000607339 EVX2Q03828 476 aa15.44■□□□□ 0.06
UCHL3-205ENST00000607339 CHADLQ6NUI6 762 aa15.4■□□□□ 0.06
UCHL3-205ENST00000607339 C19orf67A6NJJ6 358 aa15.37■□□□□ 0.05
UCHL3-205ENST00000607339 FARP1Q9Y4F1 1045 aaPredicted RBP15.33■□□□□ 0.04
UCHL3-205ENST00000607339 PROM2Q8N271 834 aa15.28■□□□□ 0.04
UCHL3-205ENST00000607339 CLCN6P51797 869 aa15.24■□□□□ 0.03
UCHL3-205ENST00000607339 CREBZFQ9NS37 354 aa15.22■□□□□ 0.03
UCHL3-205ENST00000607339 CD44P16070 742 aaKnown RBP15.21■□□□□ 0.03
UCHL3-205ENST00000607339 NPM1P06748 294 aaKnown RBP eCLIP15.18■□□□□ 0.02
UCHL3-205ENST00000607339 GABBR2O75899 941 aa15.15■□□□□ 0.02
UCHL3-205ENST00000607339 PLEKHG5O94827 1062 aa15.15■□□□□ 0.02
UCHL3-205ENST00000607339 PAK3O75914 559 aaPredicted RBP15.14■□□□□ 0.01
UCHL3-205ENST00000607339 LHX8Q68G74 356 aa15.03■□□□□ -0
UCHL3-205ENST00000607339 FKBP8Q14318 412 aa15.02■□□□□ -0
UCHL3-205ENST00000607339 ZNF579Q8NAF0 562 aaKnown RBP15.01□□□□□ -0.01
UCHL3-205ENST00000607339 ZRANB1Q9UGI0 708 aa15.01□□□□□ -0.01
UCHL3-205ENST00000607339 MNX1P50219 401 aaPredicted RBP14.94□□□□□ -0.02
UCHL3-205ENST00000607339 ZBTB47Q9UFB7 747 aaPredicted RBP14.94□□□□□ -0.02
UCHL3-205ENST00000607339 MIER1Q8N108 512 aa14.92□□□□□ -0.02
UCHL3-205ENST00000607339 FBXO3Q9UK99 471 aa14.89□□□□□ -0.03
UCHL3-205ENST00000607339 PLCD3Q8N3E9 789 aa14.88□□□□□ -0.03
UCHL3-205ENST00000607339 DCBLD2Q96PD2 775 aa14.83□□□□□ -0.04
UCHL3-205ENST00000607339 POTEIP0CG38 1075 aa14.76□□□□□ -0.05
UCHL3-205ENST00000607339 PHF12Q96QT6 1004 aa14.72□□□□□ -0.05
UCHL3-205ENST00000607339 TSPYL2Q9H2G4 693 aaPredicted RBP14.71□□□□□ -0.05
UCHL3-205ENST00000607339 GALR2O43603 387 aaPredicted RBP14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms