RNA–Protein interactions for RNA: ENST00000606960.1

AC079610.3-201, humanhuman

TSL 3 BASIC

Gene AC079610.3, Length 147 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC079610.3-201ENST00000606960 AEBP2Q6ZN18 517 aaPredicted RBP15.92■□□□□ 0.14
AC079610.3-201ENST00000606960 CHIC1Q5VXU3 224 aa15.6■□□□□ 0.09
AC079610.3-201ENST00000606960 PHF23Q9BUL5 403 aaPredicted RBP13.72□□□□□ -0.21
AC079610.3-201ENST00000606960 SENP3Q9H4L4 574 aaPredicted RBP13.51□□□□□ -0.25
AC079610.3-201ENST00000606960 PLPPR3Q6T4P5 718 aa12.7□□□□□ -0.38
AC079610.3-201ENST00000606960 FOXD1Q16676 465 aa12.53□□□□□ -0.4
AC079610.3-201ENST00000606960 ADRA2BP18089 450 aa12.11□□□□□ -0.47
AC079610.3-201ENST00000606960 PPP6R1Q9UPN7 881 aa12.09□□□□□ -0.47
AC079610.3-201ENST00000606960 PIAS4Q8N2W9 510 aaPredicted RBP11.87□□□□□ -0.51
AC079610.3-201ENST00000606960 MSH5O43196 834 aa11.53□□□□□ -0.56
AC079610.3-201ENST00000606960 PPP4R3CPQ6ZMV5 832 aa11.21□□□□□ -0.61
AC079610.3-201ENST00000606960 SCAF1Q9H7N4 1312 aaKnown RBP11.07□□□□□ -0.64
AC079610.3-201ENST00000606960 KCNA4P22459 653 aa11.01□□□□□ -0.65
AC079610.3-201ENST00000606960 MAPK8IP2Q13387 824 aaPredicted RBP10.97□□□□□ -0.65
AC079610.3-201ENST00000606960 NCBP3Q53F19 620 aaKnown RBP10.93□□□□□ -0.66
AC079610.3-201ENST00000606960 CNKSR2Q8WXI2 1034 aa10.87□□□□□ -0.67
AC079610.3-201ENST00000606960 DMRT2Q9Y5R5 561 aa10.79□□□□□ -0.68
AC079610.3-201ENST00000606960 NPM3O75607 178 aaKnown RBP10.76□□□□□ -0.69
AC079610.3-201ENST00000606960 RNF216Q9NWF9 866 aaPredicted RBP10.63□□□□□ -0.71
AC079610.3-201ENST00000606960 HOXD11P31277 338 aaPredicted RBP10.56□□□□□ -0.72
AC079610.3-201ENST00000606960 SLC4A1APQ9BWU0 796 aaKnown RBP10.51□□□□□ -0.73
AC079610.3-201ENST00000606960 POTEDQ86YR6 584 aa10.42□□□□□ -0.74
AC079610.3-201ENST00000606960 DCAF8L1A6NGE4 600 aa10.4□□□□□ -0.74
AC079610.3-201ENST00000606960 DNAJC5BQ9UF47 199 aa10.35□□□□□ -0.75
AC079610.3-201ENST00000606960 EHMT2Q96KQ7 1210 aa10.31□□□□□ -0.76
AC079610.3-201ENST00000606960 SLC4A2P04920 1241 aa10.13□□□□□ -0.79
AC079610.3-201ENST00000606960 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.13□□□□□ -0.79
AC079610.3-201ENST00000606960 ZBTB22O15209 634 aa10.12□□□□□ -0.79
AC079610.3-201ENST00000606960 FOXD4L1Q9NU39 408 aa10.12□□□□□ -0.79
AC079610.3-201ENST00000606960 CSRNP3Q8WYN3 585 aa10.09□□□□□ -0.79
AC079610.3-201ENST00000606960 MYCNP04198 464 aaPredicted RBP9.95□□□□□ -0.82
AC079610.3-201ENST00000606960 U3KPZ7 1027 aaPredicted RBP9.95□□□□□ -0.82
AC079610.3-201ENST00000606960 RNF39Q9H2S5 420 aa9.88□□□□□ -0.83
AC079610.3-201ENST00000606960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.83□□□□□ -0.84
AC079610.3-201ENST00000606960 HNRNPUL2Q1KMD3 747 aaKnown RBP9.83□□□□□ -0.84
AC079610.3-201ENST00000606960 SAMD1Q6SPF0 538 aaPredicted RBP9.8□□□□□ -0.84
AC079610.3-201ENST00000606960 C1QBPQ07021 282 aaKnown RBP9.76□□□□□ -0.85
AC079610.3-201ENST00000606960 ATXN8OSP0DMR3 200 aa9.73□□□□□ -0.85
AC079610.3-201ENST00000606960 APLP2Q06481 763 aa9.73□□□□□ -0.85
AC079610.3-201ENST00000606960 ATF5Q9Y2D1 282 aaPredicted RBP9.68□□□□□ -0.86
AC079610.3-201ENST00000606960 SPINK5Q9NQ38 1064 aaPredicted RBP9.66□□□□□ -0.86
AC079610.3-201ENST00000606960 CAPN15O75808 1086 aa9.65□□□□□ -0.86
AC079610.3-201ENST00000606960 CACNB1Q02641 598 aaPredicted RBP9.63□□□□□ -0.87
AC079610.3-201ENST00000606960 TRHP20396 242 aaPredicted RBP9.62□□□□□ -0.87
AC079610.3-201ENST00000606960 ZNF219Q9P2Y4 722 aaPredicted RBP9.58□□□□□ -0.88
AC079610.3-201ENST00000606960 ABCB7O75027 752 aa9.48□□□□□ -0.89
AC079610.3-201ENST00000606960 POLA2Q14181 598 aa9.44□□□□□ -0.9
AC079610.3-201ENST00000606960 DSG3P32926 999 aa9.42□□□□□ -0.9
AC079610.3-201ENST00000606960 FBLN2P98095 1184 aa9.29□□□□□ -0.92
AC079610.3-201ENST00000606960 ZBTB12Q9Y330 459 aaPredicted RBP9.28□□□□□ -0.92
AC079610.3-201ENST00000606960 MKRN4PQ13434 485 aaPredicted RBP9.25□□□□□ -0.93
AC079610.3-201ENST00000606960 FKBP8Q14318 412 aa9.17□□□□□ -0.94
AC079610.3-201ENST00000606960 OSCARQ8IYS5 282 aa9.14□□□□□ -0.95
AC079610.3-201ENST00000606960 SPDYE4A6NLX3 237 aa9.09□□□□□ -0.95
AC079610.3-201ENST00000606960 SPDYE2BA6NHP3 402 aa9.03□□□□□ -0.96
AC079610.3-201ENST00000606960 SPDYE6P0CI01 402 aa9.03□□□□□ -0.96
AC079610.3-201ENST00000606960 SPDYE2Q495Y8 402 aa9.03□□□□□ -0.96
AC079610.3-201ENST00000606960 ZNF692Q9BU19 519 aaPredicted RBP9.03□□□□□ -0.96
AC079610.3-201ENST00000606960 RBM42Q9BTD8 480 aaKnown RBP9□□□□□ -0.97
AC079610.3-201ENST00000606960 SSUH2Q9Y2M2 353 aa8.95□□□□□ -0.98
AC079610.3-201ENST00000606960 PABPN1Q86U42 306 aaKnown RBP eCLIP8.91□□□□□ -0.98
AC079610.3-201ENST00000606960 PROM2Q8N271 834 aa8.89□□□□□ -0.99
AC079610.3-201ENST00000606960 AKT1S1Q96B36 256 aa8.89□□□□□ -0.99
AC079610.3-201ENST00000606960 REM2Q8IYK8 340 aaPredicted RBP8.81□□□□□ -1
AC079610.3-201ENST00000606960 FBXO3Q9UK99 471 aa8.8□□□□□ -1
AC079610.3-201ENST00000606960 SPDYE1Q8NFV5 336 aaPredicted RBP8.77□□□□□ -1.01
AC079610.3-201ENST00000606960 STAG3Q9UJ98 1225 aa8.76□□□□□ -1.01
AC079610.3-201ENST00000606960 CLEC11AQ9Y240 323 aa8.76□□□□□ -1.01
AC079610.3-201ENST00000606960 PITPNM1O00562 1244 aa8.72□□□□□ -1.01
AC079610.3-201ENST00000606960 VASPP50552 380 aaPredicted RBP8.7□□□□□ -1.02
AC079610.3-201ENST00000606960 PRR29P0C7W0 189 aa8.66□□□□□ -1.02
AC079610.3-201ENST00000606960 PLCD3Q8N3E9 789 aa8.64□□□□□ -1.03
AC079610.3-201ENST00000606960 MIER1Q8N108 512 aa8.63□□□□□ -1.03
AC079610.3-201ENST00000606960 CHRDL2Q6WN34 429 aa8.6□□□□□ -1.03
AC079610.3-201ENST00000606960 PLEKHG5O94827 1062 aa8.59□□□□□ -1.03
AC079610.3-201ENST00000606960 KLHL34Q8N239 644 aa8.57□□□□□ -1.04
AC079610.3-201ENST00000606960 IFNLR1Q8IU57 520 aaPredicted RBP8.55□□□□□ -1.04
AC079610.3-201ENST00000606960 CHADLQ6NUI6 762 aa8.54□□□□□ -1.04
AC079610.3-201ENST00000606960 CREBZFQ9NS37 354 aa8.54□□□□□ -1.04
AC079610.3-201ENST00000606960 PRKAR2AP13861 404 aaKnown RBP8.51□□□□□ -1.05
AC079610.3-201ENST00000606960 FXR2P51116 673 aaKnown RBP eCLIP8.51□□□□□ -1.05
AC079610.3-201ENST00000606960 PIP4P2Q8N4L2 257 aa8.51□□□□□ -1.05
AC079610.3-201ENST00000606960 ZBTB47Q9UFB7 747 aaPredicted RBP8.51□□□□□ -1.05
AC079610.3-201ENST00000606960 SPOCK2Q92563 424 aa8.47□□□□□ -1.05
AC079610.3-201ENST00000606960 MNX1P50219 401 aaPredicted RBP8.44□□□□□ -1.06
AC079610.3-201ENST00000606960 AMER1Q5JTC6 1135 aaPredicted RBP8.43□□□□□ -1.06
AC079610.3-201ENST00000606960 FARP1Q9Y4F1 1045 aaPredicted RBP8.43□□□□□ -1.06
AC079610.3-201ENST00000606960 NPM1P06748 294 aaKnown RBP eCLIP8.42□□□□□ -1.06
AC079610.3-201ENST00000606960 RTN4Q9NQC3 1192 aaKnown RBP8.41□□□□□ -1.06
AC079610.3-201ENST00000606960 NUBP1P53384 320 aa8.36□□□□□ -1.07
AC079610.3-201ENST00000606960 CIZ1Q9ULV3 898 aaPredicted RBP8.36□□□□□ -1.07
AC079610.3-201ENST00000606960 RASEFQ8IZ41 740 aa8.34□□□□□ -1.07
AC079610.3-201ENST00000606960 FAM212AQ96EL1 285 aa8.34□□□□□ -1.07
AC079610.3-201ENST00000606960 DCAF8Q5TAQ9 597 aa8.33□□□□□ -1.08
AC079610.3-201ENST00000606960 GSE1Q14687 1217 aa8.31□□□□□ -1.08
AC079610.3-201ENST00000606960 TSPYL2Q9H2G4 693 aaPredicted RBP8.31□□□□□ -1.08
AC079610.3-201ENST00000606960 PAK3O75914 559 aaPredicted RBP8.29□□□□□ -1.08
AC079610.3-201ENST00000606960 PKD2Q13563 968 aa8.29□□□□□ -1.08
AC079610.3-201ENST00000606960 CD44P16070 742 aaKnown RBP8.28□□□□□ -1.08
AC079610.3-201ENST00000606960 ECM2O94769 699 aaPredicted RBP8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms