RNA–Protein interactions for RNA: ENST00000606826.5

CSNK1A1-211, Transcript of casein kinase 1 alpha 1, humanhuman

TSL 5

Gene CSNK1A1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1A1-211ENST00000606826 AEBP2Q6ZN18 517 aaPredicted RBP28.17■■■□□ 2.1
CSNK1A1-211ENST00000606826 CHIC1Q5VXU3 224 aa27.24■■□□□ 1.95
CSNK1A1-211ENST00000606826 SENP3Q9H4L4 574 aaPredicted RBP24.01■■□□□ 1.43
CSNK1A1-211ENST00000606826 PHF23Q9BUL5 403 aaPredicted RBP23.9■■□□□ 1.42
CSNK1A1-211ENST00000606826 FOXD1Q16676 465 aa22.28■■□□□ 1.16
CSNK1A1-211ENST00000606826 PLPPR3Q6T4P5 718 aa22.03■■□□□ 1.12
CSNK1A1-211ENST00000606826 ADRA2BP18089 450 aa21.2■□□□□ 0.98
CSNK1A1-211ENST00000606826 PPP6R1Q9UPN7 881 aa21.19■□□□□ 0.98
CSNK1A1-211ENST00000606826 PIAS4Q8N2W9 510 aaPredicted RBP21.01■□□□□ 0.95
CSNK1A1-211ENST00000606826 MSH5O43196 834 aa20.71■□□□□ 0.91
CSNK1A1-211ENST00000606826 SCAF1Q9H7N4 1312 aaKnown RBP19.43■□□□□ 0.7
CSNK1A1-211ENST00000606826 PPP4R3CPQ6ZMV5 832 aa19.37■□□□□ 0.69
CSNK1A1-211ENST00000606826 POTEDQ86YR6 584 aa19.36■□□□□ 0.69
CSNK1A1-211ENST00000606826 MAPK8IP2Q13387 824 aaPredicted RBP19.32■□□□□ 0.68
CSNK1A1-211ENST00000606826 DMRT2Q9Y5R5 561 aa19.09■□□□□ 0.65
CSNK1A1-211ENST00000606826 CNKSR2Q8WXI2 1034 aa18.89■□□□□ 0.61
CSNK1A1-211ENST00000606826 NCBP3Q53F19 620 aaKnown RBP18.81■□□□□ 0.6
CSNK1A1-211ENST00000606826 KCNA4P22459 653 aa18.58■□□□□ 0.56
CSNK1A1-211ENST00000606826 RNF216Q9NWF9 866 aaPredicted RBP18.58■□□□□ 0.56
CSNK1A1-211ENST00000606826 HOXD11P31277 338 aaPredicted RBP18.55■□□□□ 0.56
CSNK1A1-211ENST00000606826 NPM3O75607 178 aaKnown RBP18.49■□□□□ 0.55
CSNK1A1-211ENST00000606826 DCAF8L1A6NGE4 600 aa18.41■□□□□ 0.54
CSNK1A1-211ENST00000606826 DNAJC5BQ9UF47 199 aa17.88■□□□□ 0.45
CSNK1A1-211ENST00000606826 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.79■□□□□ 0.443e-7■□□□□ 10.4
CSNK1A1-211ENST00000606826 RNF39Q9H2S5 420 aa17.68■□□□□ 0.42
CSNK1A1-211ENST00000606826 SLC4A1APQ9BWU0 796 aaKnown RBP17.67■□□□□ 0.42
CSNK1A1-211ENST00000606826 CACNB1Q02641 598 aaPredicted RBP17.51■□□□□ 0.39
CSNK1A1-211ENST00000606826 SLC4A2P04920 1241 aa17.5■□□□□ 0.39
CSNK1A1-211ENST00000606826 C1QBPQ07021 282 aaKnown RBP17.47■□□□□ 0.39
CSNK1A1-211ENST00000606826 U3KPZ7 1027 aaPredicted RBP17.4■□□□□ 0.38
CSNK1A1-211ENST00000606826 FOXD4L1Q9NU39 408 aa17.2■□□□□ 0.34
CSNK1A1-211ENST00000606826 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.12■□□□□ 0.33
CSNK1A1-211ENST00000606826 MYCNP04198 464 aaPredicted RBP17.12■□□□□ 0.33
CSNK1A1-211ENST00000606826 HNRNPUL2Q1KMD3 747 aaKnown RBP17.12■□□□□ 0.33
CSNK1A1-211ENST00000606826 ZBTB22O15209 634 aa17.06■□□□□ 0.32
CSNK1A1-211ENST00000606826 CAPN15O75808 1086 aa17.03■□□□□ 0.32
CSNK1A1-211ENST00000606826 APLP2Q06481 763 aa17.03■□□□□ 0.32
CSNK1A1-211ENST00000606826 SAMD1Q6SPF0 538 aaPredicted RBP17.03■□□□□ 0.32
CSNK1A1-211ENST00000606826 SPINK5Q9NQ38 1064 aaPredicted RBP17.02■□□□□ 0.32
CSNK1A1-211ENST00000606826 EHMT2Q96KQ7 1210 aa16.88■□□□□ 0.29
CSNK1A1-211ENST00000606826 TRHP20396 242 aaPredicted RBP16.87■□□□□ 0.29
CSNK1A1-211ENST00000606826 ZNF219Q9P2Y4 722 aaPredicted RBP16.83■□□□□ 0.28
CSNK1A1-211ENST00000606826 DSG3P32926 999 aa16.73■□□□□ 0.27
CSNK1A1-211ENST00000606826 CSRNP3Q8WYN3 585 aa16.72■□□□□ 0.27
CSNK1A1-211ENST00000606826 ABCB7O75027 752 aa16.67■□□□□ 0.26
CSNK1A1-211ENST00000606826 ATF5Q9Y2D1 282 aaPredicted RBP16.64■□□□□ 0.25
CSNK1A1-211ENST00000606826 ATXN8OSP0DMR3 200 aa16.58■□□□□ 0.24
CSNK1A1-211ENST00000606826 POLA2Q14181 598 aa16.48■□□□□ 0.23
CSNK1A1-211ENST00000606826 ZBTB12Q9Y330 459 aaPredicted RBP16.2■□□□□ 0.18
CSNK1A1-211ENST00000606826 FBLN2P98095 1184 aa16.04■□□□□ 0.16
CSNK1A1-211ENST00000606826 RBM42Q9BTD8 480 aaKnown RBP16■□□□□ 0.15
CSNK1A1-211ENST00000606826 OSCARQ8IYS5 282 aa15.96■□□□□ 0.15
CSNK1A1-211ENST00000606826 MKRN4PQ13434 485 aaPredicted RBP15.9■□□□□ 0.14
CSNK1A1-211ENST00000606826 SPDYE2BA6NHP3 402 aa15.73■□□□□ 0.11
CSNK1A1-211ENST00000606826 SPDYE6P0CI01 402 aa15.73■□□□□ 0.11
CSNK1A1-211ENST00000606826 SPDYE2Q495Y8 402 aa15.73■□□□□ 0.11
CSNK1A1-211ENST00000606826 AKT1S1Q96B36 256 aa15.71■□□□□ 0.11
CSNK1A1-211ENST00000606826 ZNF692Q9BU19 519 aaPredicted RBP15.64■□□□□ 0.09
CSNK1A1-211ENST00000606826 REM2Q8IYK8 340 aaPredicted RBP15.56■□□□□ 0.08
CSNK1A1-211ENST00000606826 SSUH2Q9Y2M2 353 aa15.53■□□□□ 0.08
CSNK1A1-211ENST00000606826 SPDYE4A6NLX3 237 aa15.46■□□□□ 0.07
CSNK1A1-211ENST00000606826 CHRDL2Q6WN34 429 aa15.44■□□□□ 0.06
CSNK1A1-211ENST00000606826 PABPN1Q86U42 306 aaKnown RBP eCLIP15.43■□□□□ 0.06
CSNK1A1-211ENST00000606826 PITPNM1O00562 1244 aa15.4■□□□□ 0.06
CSNK1A1-211ENST00000606826 SPDYE1Q8NFV5 336 aaPredicted RBP15.35■□□□□ 0.05
CSNK1A1-211ENST00000606826 CLEC11AQ9Y240 323 aa15.35■□□□□ 0.05
CSNK1A1-211ENST00000606826 POTEHQ6S545 545 aa15.29■□□□□ 0.04
CSNK1A1-211ENST00000606826 FKBP8Q14318 412 aa15.21■□□□□ 0.03
CSNK1A1-211ENST00000606826 PIP4P2Q8N4L2 257 aa15.16■□□□□ 0.02
CSNK1A1-211ENST00000606826 PRR29P0C7W0 189 aa15.13■□□□□ 0.01
CSNK1A1-211ENST00000606826 FXR2P51116 673 aaKnown RBP eCLIP15.12■□□□□ 0.01
CSNK1A1-211ENST00000606826 STAG3Q9UJ98 1225 aa15.1■□□□□ 0.01
CSNK1A1-211ENST00000606826 PROM2Q8N271 834 aa15.06■□□□□ 0
CSNK1A1-211ENST00000606826 PRKAR2AP13861 404 aaKnown RBP15.03■□□□□ -0
CSNK1A1-211ENST00000606826 CHADLQ6NUI6 762 aa14.97□□□□□ -0.01
CSNK1A1-211ENST00000606826 CREBZFQ9NS37 354 aa14.82□□□□□ -0.04
CSNK1A1-211ENST00000606826 HAX1O00165 279 aa14.81□□□□□ -0.04
CSNK1A1-211ENST00000606826 FARP1Q9Y4F1 1045 aaPredicted RBP14.77□□□□□ -0.05
CSNK1A1-211ENST00000606826 FBXO3Q9UK99 471 aa14.74□□□□□ -0.05
CSNK1A1-211ENST00000606826 MIER1Q8N108 512 aa14.72□□□□□ -0.05
CSNK1A1-211ENST00000606826 PLEKHG5O94827 1062 aa14.7□□□□□ -0.06
CSNK1A1-211ENST00000606826 PLCD3Q8N3E9 789 aa14.69□□□□□ -0.06
CSNK1A1-211ENST00000606826 C19orf67A6NJJ6 358 aa14.63□□□□□ -0.07
CSNK1A1-211ENST00000606826 NPM1P06748 294 aaKnown RBP eCLIP14.63□□□□□ -0.07
CSNK1A1-211ENST00000606826 CD44P16070 742 aaKnown RBP14.59□□□□□ -0.07
CSNK1A1-211ENST00000606826 MNX1P50219 401 aaPredicted RBP14.58□□□□□ -0.08
CSNK1A1-211ENST00000606826 EVX2Q03828 476 aa14.58□□□□□ -0.08
CSNK1A1-211ENST00000606826 SP7Q8TDD2 431 aaPredicted RBP14.56□□□□□ -0.08
CSNK1A1-211ENST00000606826 VASPP50552 380 aaPredicted RBP14.54□□□□□ -0.08
CSNK1A1-211ENST00000606826 ZBTB47Q9UFB7 747 aaPredicted RBP14.51□□□□□ -0.09
CSNK1A1-211ENST00000606826 PAK3O75914 559 aaPredicted RBP14.49□□□□□ -0.09
CSNK1A1-211ENST00000606826 ZRANB1Q9UGI0 708 aa14.46□□□□□ -0.09
CSNK1A1-211ENST00000606826 KLHL34Q8N239 644 aa14.42□□□□□ -0.1
CSNK1A1-211ENST00000606826 TSPYL2Q9H2G4 693 aaPredicted RBP14.39□□□□□ -0.11
CSNK1A1-211ENST00000606826 RASEFQ8IZ41 740 aa14.34□□□□□ -0.11
CSNK1A1-211ENST00000606826 ZNF579Q8NAF0 562 aaKnown RBP14.34□□□□□ -0.11
CSNK1A1-211ENST00000606826 GABBR2O75899 941 aa14.31□□□□□ -0.12
CSNK1A1-211ENST00000606826 NUBP1P53384 320 aa14.3□□□□□ -0.12
CSNK1A1-211ENST00000606826 PHF12Q96QT6 1004 aa14.29□□□□□ -0.12
CSNK1A1-211ENST00000606826 IFNLR1Q8IU57 520 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms