RNA–Protein interactions for RNA: ENST00000606801.1

RNU6-88P-201, Transcript of RNA, U6 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU6-88P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-88P-201ENST00000606801 AEBP2Q6ZN18 517 aaPredicted RBP20.7■□□□□ 0.9
RNU6-88P-201ENST00000606801 CHIC1Q5VXU3 224 aa20.05■□□□□ 0.8
RNU6-88P-201ENST00000606801 PHF23Q9BUL5 403 aaPredicted RBP17.62■□□□□ 0.41
RNU6-88P-201ENST00000606801 SENP3Q9H4L4 574 aaPredicted RBP17.58■□□□□ 0.4
RNU6-88P-201ENST00000606801 FOXD1Q16676 465 aa16.35■□□□□ 0.21
RNU6-88P-201ENST00000606801 PLPPR3Q6T4P5 718 aa16.2■□□□□ 0.18
RNU6-88P-201ENST00000606801 PPP6R1Q9UPN7 881 aa15.61■□□□□ 0.09
RNU6-88P-201ENST00000606801 ADRA2BP18089 450 aa15.57■□□□□ 0.08
RNU6-88P-201ENST00000606801 PIAS4Q8N2W9 510 aaPredicted RBP15.36■□□□□ 0.05
RNU6-88P-201ENST00000606801 MSH5O43196 834 aa15.14■□□□□ 0.01
RNU6-88P-201ENST00000606801 PPP4R3CPQ6ZMV5 832 aa14.26□□□□□ -0.13
RNU6-88P-201ENST00000606801 SCAF1Q9H7N4 1312 aaKnown RBP14.25□□□□□ -0.13
RNU6-88P-201ENST00000606801 MAPK8IP2Q13387 824 aaPredicted RBP14.18□□□□□ -0.14
RNU6-88P-201ENST00000606801 POTEDQ86YR6 584 aa14.09□□□□□ -0.15
RNU6-88P-201ENST00000606801 DMRT2Q9Y5R5 561 aa14.02□□□□□ -0.17
RNU6-88P-201ENST00000606801 CNKSR2Q8WXI2 1034 aa13.9□□□□□ -0.18
RNU6-88P-201ENST00000606801 KCNA4P22459 653 aa13.85□□□□□ -0.19
RNU6-88P-201ENST00000606801 NCBP3Q53F19 620 aaKnown RBP13.83□□□□□ -0.2
RNU6-88P-201ENST00000606801 HOXD11P31277 338 aaPredicted RBP13.68□□□□□ -0.22
RNU6-88P-201ENST00000606801 RNF216Q9NWF9 866 aaPredicted RBP13.67□□□□□ -0.22
RNU6-88P-201ENST00000606801 NPM3O75607 178 aaKnown RBP13.63□□□□□ -0.23
RNU6-88P-201ENST00000606801 DCAF8L1A6NGE4 600 aa13.38□□□□□ -0.27
RNU6-88P-201ENST00000606801 DNAJC5BQ9UF47 199 aa13.3□□□□□ -0.28
RNU6-88P-201ENST00000606801 SLC4A1APQ9BWU0 796 aaKnown RBP13.16□□□□□ -0.3
RNU6-88P-201ENST00000606801 EHMT2Q96KQ7 1210 aa13.04□□□□□ -0.32
RNU6-88P-201ENST00000606801 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.99□□□□□ -0.33
RNU6-88P-201ENST00000606801 RNF39Q9H2S5 420 aa12.96□□□□□ -0.33
RNU6-88P-201ENST00000606801 SLC4A2P04920 1241 aa12.92□□□□□ -0.34
RNU6-88P-201ENST00000606801 CSRNP3Q8WYN3 585 aa12.88□□□□□ -0.35
RNU6-88P-201ENST00000606801 ZBTB22O15209 634 aa12.8□□□□□ -0.36
RNU6-88P-201ENST00000606801 C1QBPQ07021 282 aaKnown RBP12.79□□□□□ -0.36
RNU6-88P-201ENST00000606801 U3KPZ7 1027 aaPredicted RBP12.79□□□□□ -0.36
RNU6-88P-201ENST00000606801 CACNB1Q02641 598 aaPredicted RBP12.73□□□□□ -0.37
RNU6-88P-201ENST00000606801 FOXD4L1Q9NU39 408 aa12.68□□□□□ -0.38
RNU6-88P-201ENST00000606801 MYCNP04198 464 aaPredicted RBP12.59□□□□□ -0.39
RNU6-88P-201ENST00000606801 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.55□□□□□ -0.4
RNU6-88P-201ENST00000606801 HNRNPUL2Q1KMD3 747 aaKnown RBP12.55□□□□□ -0.4
RNU6-88P-201ENST00000606801 SAMD1Q6SPF0 538 aaPredicted RBP12.5□□□□□ -0.41
RNU6-88P-201ENST00000606801 SPINK5Q9NQ38 1064 aaPredicted RBP12.47□□□□□ -0.41
RNU6-88P-201ENST00000606801 APLP2Q06481 763 aa12.46□□□□□ -0.41
RNU6-88P-201ENST00000606801 CAPN15O75808 1086 aa12.42□□□□□ -0.42
RNU6-88P-201ENST00000606801 TRHP20396 242 aaPredicted RBP12.32□□□□□ -0.44
RNU6-88P-201ENST00000606801 ZNF219Q9P2Y4 722 aaPredicted RBP12.31□□□□□ -0.44
RNU6-88P-201ENST00000606801 ATF5Q9Y2D1 282 aaPredicted RBP12.28□□□□□ -0.44
RNU6-88P-201ENST00000606801 ATXN8OSP0DMR3 200 aa12.27□□□□□ -0.45
RNU6-88P-201ENST00000606801 DSG3P32926 999 aa12.27□□□□□ -0.45
RNU6-88P-201ENST00000606801 ABCB7O75027 752 aa12.17□□□□□ -0.46
RNU6-88P-201ENST00000606801 POLA2Q14181 598 aa12.1□□□□□ -0.47
RNU6-88P-201ENST00000606801 ZBTB12Q9Y330 459 aaPredicted RBP11.87□□□□□ -0.51
RNU6-88P-201ENST00000606801 FBLN2P98095 1184 aa11.76□□□□□ -0.53
RNU6-88P-201ENST00000606801 MKRN4PQ13434 485 aaPredicted RBP11.74□□□□□ -0.53
RNU6-88P-201ENST00000606801 RBM42Q9BTD8 480 aaKnown RBP11.69□□□□□ -0.54
RNU6-88P-201ENST00000606801 OSCARQ8IYS5 282 aa11.67□□□□□ -0.54
RNU6-88P-201ENST00000606801 SPDYE2BA6NHP3 402 aa11.55□□□□□ -0.56
RNU6-88P-201ENST00000606801 SPDYE6P0CI01 402 aa11.55□□□□□ -0.56
RNU6-88P-201ENST00000606801 FKBP8Q14318 412 aa11.55□□□□□ -0.56
RNU6-88P-201ENST00000606801 SPDYE2Q495Y8 402 aa11.55□□□□□ -0.56
RNU6-88P-201ENST00000606801 AKT1S1Q96B36 256 aa11.51□□□□□ -0.57
RNU6-88P-201ENST00000606801 ZNF692Q9BU19 519 aaPredicted RBP11.47□□□□□ -0.57
RNU6-88P-201ENST00000606801 SSUH2Q9Y2M2 353 aa11.44□□□□□ -0.58
RNU6-88P-201ENST00000606801 REM2Q8IYK8 340 aaPredicted RBP11.4□□□□□ -0.58
RNU6-88P-201ENST00000606801 SPDYE4A6NLX3 237 aa11.38□□□□□ -0.59
RNU6-88P-201ENST00000606801 PABPN1Q86U42 306 aaKnown RBP eCLIP11.31□□□□□ -0.6
RNU6-88P-201ENST00000606801 PITPNM1O00562 1244 aa11.28□□□□□ -0.6
RNU6-88P-201ENST00000606801 CHRDL2Q6WN34 429 aa11.27□□□□□ -0.61
RNU6-88P-201ENST00000606801 PROM2Q8N271 834 aa11.24□□□□□ -0.61
RNU6-88P-201ENST00000606801 SPDYE1Q8NFV5 336 aaPredicted RBP11.24□□□□□ -0.61
RNU6-88P-201ENST00000606801 CLEC11AQ9Y240 323 aa11.19□□□□□ -0.62
RNU6-88P-201ENST00000606801 FXR2P51116 673 aaKnown RBP eCLIP11.11□□□□□ -0.63
RNU6-88P-201ENST00000606801 POTEHQ6S545 545 aa11.11□□□□□ -0.63
RNU6-88P-201ENST00000606801 PIP4P2Q8N4L2 257 aa11.1□□□□□ -0.63
RNU6-88P-201ENST00000606801 STAG3Q9UJ98 1225 aa11.1□□□□□ -0.63
RNU6-88P-201ENST00000606801 PRR29P0C7W0 189 aa11.08□□□□□ -0.64
RNU6-88P-201ENST00000606801 FBXO3Q9UK99 471 aa11□□□□□ -0.65
RNU6-88P-201ENST00000606801 PRKAR2AP13861 404 aaKnown RBP10.98□□□□□ -0.65
RNU6-88P-201ENST00000606801 CHADLQ6NUI6 762 aa10.94□□□□□ -0.66
RNU6-88P-201ENST00000606801 RTN4Q9NQC3 1192 aaKnown RBP10.94□□□□□ -0.66
RNU6-88P-201ENST00000606801 VASPP50552 380 aaPredicted RBP10.91□□□□□ -0.66
RNU6-88P-201ENST00000606801 CREBZFQ9NS37 354 aa10.91□□□□□ -0.66
RNU6-88P-201ENST00000606801 AMER1Q5JTC6 1135 aaPredicted RBP10.86□□□□□ -0.67
RNU6-88P-201ENST00000606801 IFNLR1Q8IU57 520 aaPredicted RBP10.85□□□□□ -0.67
RNU6-88P-201ENST00000606801 FARP1Q9Y4F1 1045 aaPredicted RBP10.83□□□□□ -0.68
RNU6-88P-201ENST00000606801 MIER1Q8N108 512 aa10.81□□□□□ -0.68
RNU6-88P-201ENST00000606801 MNX1P50219 401 aaPredicted RBP10.79□□□□□ -0.68
RNU6-88P-201ENST00000606801 HAX1O00165 279 aa10.77□□□□□ -0.69
RNU6-88P-201ENST00000606801 PLCD3Q8N3E9 789 aa10.76□□□□□ -0.69
RNU6-88P-201ENST00000606801 PLEKHG5O94827 1062 aa10.75□□□□□ -0.69
RNU6-88P-201ENST00000606801 C19orf67A6NJJ6 358 aa10.74□□□□□ -0.69
RNU6-88P-201ENST00000606801 NPM1P06748 294 aaKnown RBP eCLIP10.71□□□□□ -0.69
RNU6-88P-201ENST00000606801 EVX2Q03828 476 aa10.69□□□□□ -0.7
RNU6-88P-201ENST00000606801 ZBTB47Q9UFB7 747 aaPredicted RBP10.66□□□□□ -0.7
RNU6-88P-201ENST00000606801 CD44P16070 742 aaKnown RBP10.65□□□□□ -0.7
RNU6-88P-201ENST00000606801 KLHL34Q8N239 644 aa10.61□□□□□ -0.71
RNU6-88P-201ENST00000606801 SP7Q8TDD2 431 aaPredicted RBP10.61□□□□□ -0.71
RNU6-88P-201ENST00000606801 SPOCK2Q92563 424 aa10.59□□□□□ -0.71
RNU6-88P-201ENST00000606801 PKD2Q13563 968 aa10.58□□□□□ -0.72
RNU6-88P-201ENST00000606801 ZRANB1Q9UGI0 708 aa10.57□□□□□ -0.72
RNU6-88P-201ENST00000606801 PAK3O75914 559 aaPredicted RBP10.56□□□□□ -0.72
RNU6-88P-201ENST00000606801 NUBP1P53384 320 aa10.56□□□□□ -0.72
RNU6-88P-201ENST00000606801 RASEFQ8IZ41 740 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms