RNA–Protein interactions for RNA: ENST00000605210.1

TNPO1-214, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-214ENST00000605210 AEBP2Q6ZN18 517 aaPredicted RBP24.35■■□□□ 1.49
TNPO1-214ENST00000605210 CHIC1Q5VXU3 224 aa23.88■■□□□ 1.41
TNPO1-214ENST00000605210 PHF23Q9BUL5 403 aaPredicted RBP20.91■□□□□ 0.94
TNPO1-214ENST00000605210 SENP3Q9H4L4 574 aaPredicted RBP20.84■□□□□ 0.93
TNPO1-214ENST00000605210 PLPPR3Q6T4P5 718 aa19.48■□□□□ 0.71
TNPO1-214ENST00000605210 FOXD1Q16676 465 aa19.22■□□□□ 0.67
TNPO1-214ENST00000605210 ADRA2BP18089 450 aa18.5■□□□□ 0.55
TNPO1-214ENST00000605210 PPP6R1Q9UPN7 881 aa18.44■□□□□ 0.54
TNPO1-214ENST00000605210 PIAS4Q8N2W9 510 aaPredicted RBP18.24■□□□□ 0.51
TNPO1-214ENST00000605210 MSH5O43196 834 aa17.86■□□□□ 0.45
TNPO1-214ENST00000605210 PPP4R3CPQ6ZMV5 832 aa17.12■□□□□ 0.33
TNPO1-214ENST00000605210 SCAF1Q9H7N4 1312 aaKnown RBP17.1■□□□□ 0.33
TNPO1-214ENST00000605210 NCBP3Q53F19 620 aaKnown RBP16.79■□□□□ 0.28
TNPO1-214ENST00000605210 MAPK8IP2Q13387 824 aaPredicted RBP16.74■□□□□ 0.27
TNPO1-214ENST00000605210 KCNA4P22459 653 aa16.71■□□□□ 0.27
TNPO1-214ENST00000605210 CNKSR2Q8WXI2 1034 aa16.67■□□□□ 0.26
TNPO1-214ENST00000605210 DMRT2Q9Y5R5 561 aa16.58■□□□□ 0.24
TNPO1-214ENST00000605210 NPM3O75607 178 aaKnown RBP16.4■□□□□ 0.22
TNPO1-214ENST00000605210 RNF216Q9NWF9 866 aaPredicted RBP16.33■□□□□ 0.2
TNPO1-214ENST00000605210 HOXD11P31277 338 aaPredicted RBP16.21■□□□□ 0.19
TNPO1-214ENST00000605210 POTEDQ86YR6 584 aa16.13■□□□□ 0.17
TNPO1-214ENST00000605210 DCAF8L1A6NGE4 600 aa15.99■□□□□ 0.15
TNPO1-214ENST00000605210 SLC4A1APQ9BWU0 796 aaKnown RBP15.99■□□□□ 0.15
TNPO1-214ENST00000605210 DNAJC5BQ9UF47 199 aa15.88■□□□□ 0.13
TNPO1-214ENST00000605210 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.58■□□□□ 0.08
TNPO1-214ENST00000605210 EHMT2Q96KQ7 1210 aa15.55■□□□□ 0.08
TNPO1-214ENST00000605210 FOXD4L1Q9NU39 408 aa15.44■□□□□ 0.06
TNPO1-214ENST00000605210 SLC4A2P04920 1241 aa15.43■□□□□ 0.06
TNPO1-214ENST00000605210 ZBTB22O15209 634 aa15.29■□□□□ 0.04
TNPO1-214ENST00000605210 CSRNP3Q8WYN3 585 aa15.26■□□□□ 0.03
TNPO1-214ENST00000605210 MYCNP04198 464 aaPredicted RBP15.23■□□□□ 0.03
TNPO1-214ENST00000605210 RNF39Q9H2S5 420 aa15.21■□□□□ 0.03
TNPO1-214ENST00000605210 U3KPZ7 1027 aaPredicted RBP15.21■□□□□ 0.03
TNPO1-214ENST00000605210 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.2■□□□□ 0.02
TNPO1-214ENST00000605210 HNRNPUL2Q1KMD3 747 aaKnown RBP15.2■□□□□ 0.02
TNPO1-214ENST00000605210 C1QBPQ07021 282 aaKnown RBP15.1■□□□□ 0.01
TNPO1-214ENST00000605210 SAMD1Q6SPF0 538 aaPredicted RBP15.1■□□□□ 0.01
TNPO1-214ENST00000605210 APLP2Q06481 763 aa15.07■□□□□ 0
TNPO1-214ENST00000605210 ATXN8OSP0DMR3 200 aa14.9□□□□□ -0.02
TNPO1-214ENST00000605210 CACNB1Q02641 598 aaPredicted RBP14.9□□□□□ -0.02
TNPO1-214ENST00000605210 CAPN15O75808 1086 aa14.83□□□□□ -0.04
TNPO1-214ENST00000605210 SPINK5Q9NQ38 1064 aaPredicted RBP14.77□□□□□ -0.05
TNPO1-214ENST00000605210 ZNF219Q9P2Y4 722 aaPredicted RBP14.77□□□□□ -0.05
TNPO1-214ENST00000605210 TRHP20396 242 aaPredicted RBP14.75□□□□□ -0.05
TNPO1-214ENST00000605210 ATF5Q9Y2D1 282 aaPredicted RBP14.68□□□□□ -0.06
TNPO1-214ENST00000605210 ABCB7O75027 752 aa14.49□□□□□ -0.09
TNPO1-214ENST00000605210 DSG3P32926 999 aa14.48□□□□□ -0.09
TNPO1-214ENST00000605210 POLA2Q14181 598 aa14.48□□□□□ -0.09
TNPO1-214ENST00000605210 ZBTB12Q9Y330 459 aaPredicted RBP14.34□□□□□ -0.11
TNPO1-214ENST00000605210 FBLN2P98095 1184 aa14.29□□□□□ -0.12
TNPO1-214ENST00000605210 MKRN4PQ13434 485 aaPredicted RBP14.06□□□□□ -0.16
TNPO1-214ENST00000605210 OSCARQ8IYS5 282 aa13.98□□□□□ -0.17
TNPO1-214ENST00000605210 RBM42Q9BTD8 480 aaKnown RBP13.93□□□□□ -0.18
TNPO1-214ENST00000605210 FKBP8Q14318 412 aa13.9□□□□□ -0.18
TNPO1-214ENST00000605210 SPDYE2BA6NHP3 402 aa13.88□□□□□ -0.19
TNPO1-214ENST00000605210 SPDYE4A6NLX3 237 aa13.88□□□□□ -0.19
TNPO1-214ENST00000605210 SPDYE6P0CI01 402 aa13.88□□□□□ -0.19
TNPO1-214ENST00000605210 SPDYE2Q495Y8 402 aa13.88□□□□□ -0.19
TNPO1-214ENST00000605210 ZNF692Q9BU19 519 aaPredicted RBP13.84□□□□□ -0.19
TNPO1-214ENST00000605210 SSUH2Q9Y2M2 353 aa13.7□□□□□ -0.22
TNPO1-214ENST00000605210 AKT1S1Q96B36 256 aa13.69□□□□□ -0.22
TNPO1-214ENST00000605210 PABPN1Q86U42 306 aaKnown RBP eCLIP13.64□□□□□ -0.23
TNPO1-214ENST00000605210 REM2Q8IYK8 340 aaPredicted RBP13.53□□□□□ -0.24
TNPO1-214ENST00000605210 PROM2Q8N271 834 aa13.52□□□□□ -0.25
TNPO1-214ENST00000605210 SPDYE1Q8NFV5 336 aaPredicted RBP13.51□□□□□ -0.25
TNPO1-214ENST00000605210 FBXO3Q9UK99 471 aa13.48□□□□□ -0.25
TNPO1-214ENST00000605210 STAG3Q9UJ98 1225 aa13.47□□□□□ -0.25
TNPO1-214ENST00000605210 CLEC11AQ9Y240 323 aa13.44□□□□□ -0.26
TNPO1-214ENST00000605210 PITPNM1O00562 1244 aa13.37□□□□□ -0.27
TNPO1-214ENST00000605210 PRR29P0C7W0 189 aa13.33□□□□□ -0.28
TNPO1-214ENST00000605210 CHRDL2Q6WN34 429 aa13.28□□□□□ -0.28
TNPO1-214ENST00000605210 PLEKHG5O94827 1062 aa13.26□□□□□ -0.29
TNPO1-214ENST00000605210 VASPP50552 380 aaPredicted RBP13.22□□□□□ -0.29
TNPO1-214ENST00000605210 PLCD3Q8N3E9 789 aa13.21□□□□□ -0.29
TNPO1-214ENST00000605210 MIER1Q8N108 512 aa13.19□□□□□ -0.3
TNPO1-214ENST00000605210 ZBTB47Q9UFB7 747 aaPredicted RBP13.11□□□□□ -0.31
TNPO1-214ENST00000605210 FXR2P51116 673 aaKnown RBP eCLIP13.09□□□□□ -0.31
TNPO1-214ENST00000605210 PRKAR2AP13861 404 aaKnown RBP13.08□□□□□ -0.32
TNPO1-214ENST00000605210 KLHL34Q8N239 644 aa13.08□□□□□ -0.32
TNPO1-214ENST00000605210 PIP4P2Q8N4L2 257 aa13.07□□□□□ -0.32
TNPO1-214ENST00000605210 CREBZFQ9NS37 354 aa13.05□□□□□ -0.32
TNPO1-214ENST00000605210 CHADLQ6NUI6 762 aa13.02□□□□□ -0.33
TNPO1-214ENST00000605210 NPM1P06748 294 aaKnown RBP eCLIP12.97□□□□□ -0.33
TNPO1-214ENST00000605210 IFNLR1Q8IU57 520 aaPredicted RBP12.96□□□□□ -0.33
TNPO1-214ENST00000605210 FARP1Q9Y4F1 1045 aaPredicted RBP12.94□□□□□ -0.34
TNPO1-214ENST00000605210 SPOCK2Q92563 424 aa12.92□□□□□ -0.34
TNPO1-214ENST00000605210 MNX1P50219 401 aaPredicted RBP12.85□□□□□ -0.35
TNPO1-214ENST00000605210 POTEHQ6S545 545 aa12.83□□□□□ -0.36
TNPO1-214ENST00000605210 PAK3O75914 559 aaPredicted RBP12.81□□□□□ -0.36
TNPO1-214ENST00000605210 FAM212AQ96EL1 285 aa12.79□□□□□ -0.36
TNPO1-214ENST00000605210 CIZ1Q9ULV3 898 aaPredicted RBP12.75□□□□□ -0.37
TNPO1-214ENST00000605210 NUBP1P53384 320 aa12.74□□□□□ -0.37
TNPO1-214ENST00000605210 GSE1Q14687 1217 aa12.74□□□□□ -0.37
TNPO1-214ENST00000605210 DCAF8Q5TAQ9 597 aa12.74□□□□□ -0.37
TNPO1-214ENST00000605210 HAX1O00165 279 aa12.73□□□□□ -0.37
TNPO1-214ENST00000605210 CD44P16070 742 aaKnown RBP12.72□□□□□ -0.37
TNPO1-214ENST00000605210 AMER1Q5JTC6 1135 aaPredicted RBP12.72□□□□□ -0.37
TNPO1-214ENST00000605210 RASEFQ8IZ41 740 aa12.71□□□□□ -0.37
TNPO1-214ENST00000605210 TSPYL2Q9H2G4 693 aaPredicted RBP12.7□□□□□ -0.38
TNPO1-214ENST00000605210 ZRANB1Q9UGI0 708 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms