RNA–Protein interactions for RNA: ENST00000604922.1

SH3D19-213, Transcript of SH3 domain containing 19, humanhuman

TSL 2

Gene SH3D19, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-213ENST00000604922 AEBP2Q6ZN18 517 aaPredicted RBP30.2■■■□□ 2.43
SH3D19-213ENST00000604922 CHIC1Q5VXU3 224 aa28.22■■■□□ 2.11
SH3D19-213ENST00000604922 SENP3Q9H4L4 574 aaPredicted RBP25.78■■□□□ 1.72
SH3D19-213ENST00000604922 PHF23Q9BUL5 403 aaPredicted RBP25.37■■□□□ 1.65
SH3D19-213ENST00000604922 POTEDQ86YR6 584 aa24.46■■□□□ 1.51
SH3D19-213ENST00000604922 FOXD1Q16676 465 aa24.27■■□□□ 1.48
SH3D19-213ENST00000604922 MSH5O43196 834 aa23■■□□□ 1.27
SH3D19-213ENST00000604922 PLPPR3Q6T4P5 718 aa22.89■■□□□ 1.25
SH3D19-213ENST00000604922 PIAS4Q8N2W9 510 aaPredicted RBP22.33■■□□□ 1.17
SH3D19-213ENST00000604922 PPP6R1Q9UPN7 881 aa21.91■■□□□ 1.1
SH3D19-213ENST00000604922 ADRA2BP18089 450 aa21.88■■□□□ 1.09
SH3D19-213ENST00000604922 CACNB1Q02641 598 aaPredicted RBP20.47■□□□□ 0.87
SH3D19-213ENST00000604922 MAPK8IP2Q13387 824 aaPredicted RBP20.34■□□□□ 0.85
SH3D19-213ENST00000604922 DMRT2Q9Y5R5 561 aa20.3■□□□□ 0.84
SH3D19-213ENST00000604922 SCAF1Q9H7N4 1312 aaKnown RBP20.17■□□□□ 0.82
SH3D19-213ENST00000604922 PPP4R3CPQ6ZMV5 832 aa20.12■□□□□ 0.81
SH3D19-213ENST00000604922 NCBP3Q53F19 620 aaKnown RBP19.62■□□□□ 0.73
SH3D19-213ENST00000604922 CNKSR2Q8WXI2 1034 aa19.62■□□□□ 0.73
SH3D19-213ENST00000604922 RNF39Q9H2S5 420 aa19.61■□□□□ 0.73
SH3D19-213ENST00000604922 DCAF8L1A6NGE4 600 aa19.5■□□□□ 0.71
SH3D19-213ENST00000604922 KCNA4P22459 653 aa19.41■□□□□ 0.7
SH3D19-213ENST00000604922 RNF216Q9NWF9 866 aaPredicted RBP19.27■□□□□ 0.68
SH3D19-213ENST00000604922 NPM3O75607 178 aaKnown RBP19.22■□□□□ 0.67
SH3D19-213ENST00000604922 HOXD11P31277 338 aaPredicted RBP19.22■□□□□ 0.67
SH3D19-213ENST00000604922 C1QBPQ07021 282 aaKnown RBP19.2■□□□□ 0.66
SH3D19-213ENST00000604922 POTEHQ6S545 545 aa18.92■□□□□ 0.62
SH3D19-213ENST00000604922 DNAJC5BQ9UF47 199 aa18.69■□□□□ 0.58
SH3D19-213ENST00000604922 SLC4A1APQ9BWU0 796 aaKnown RBP18.51■□□□□ 0.55
SH3D19-213ENST00000604922 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.37■□□□□ 0.53
SH3D19-213ENST00000604922 SLC4A2P04920 1241 aa18.17■□□□□ 0.5
SH3D19-213ENST00000604922 DSG3P32926 999 aa18■□□□□ 0.47
SH3D19-213ENST00000604922 U3KPZ7 1027 aaPredicted RBP17.98■□□□□ 0.47
SH3D19-213ENST00000604922 FOXD4L1Q9NU39 408 aa17.97■□□□□ 0.47
SH3D19-213ENST00000604922 SPINK5Q9NQ38 1064 aaPredicted RBP17.86■□□□□ 0.45
SH3D19-213ENST00000604922 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.82■□□□□ 0.44
SH3D19-213ENST00000604922 MYCNP04198 464 aaPredicted RBP17.82■□□□□ 0.44
SH3D19-213ENST00000604922 HNRNPUL2Q1KMD3 747 aaKnown RBP17.82■□□□□ 0.44
SH3D19-213ENST00000604922 ZBTB22O15209 634 aa17.8■□□□□ 0.44
SH3D19-213ENST00000604922 CAPN15O75808 1086 aa17.79■□□□□ 0.44
SH3D19-213ENST00000604922 EHMT2Q96KQ7 1210 aa17.75■□□□□ 0.43
SH3D19-213ENST00000604922 SAMD1Q6SPF0 538 aaPredicted RBP17.71■□□□□ 0.43
SH3D19-213ENST00000604922 APLP2Q06481 763 aa17.7■□□□□ 0.42
SH3D19-213ENST00000604922 CSRNP3Q8WYN3 585 aa17.6■□□□□ 0.41
SH3D19-213ENST00000604922 ZNF219Q9P2Y4 722 aaPredicted RBP17.41■□□□□ 0.38
SH3D19-213ENST00000604922 TRHP20396 242 aaPredicted RBP17.4■□□□□ 0.38
SH3D19-213ENST00000604922 ATXN8OSP0DMR3 200 aa17.37■□□□□ 0.37
SH3D19-213ENST00000604922 ABCB7O75027 752 aa17.33■□□□□ 0.36
SH3D19-213ENST00000604922 ATF5Q9Y2D1 282 aaPredicted RBP17.26■□□□□ 0.35
SH3D19-213ENST00000604922 CHRDL2Q6WN34 429 aa17.24■□□□□ 0.35
SH3D19-213ENST00000604922 SP7Q8TDD2 431 aaPredicted RBP17.19■□□□□ 0.34
SH3D19-213ENST00000604922 POLA2Q14181 598 aa17.07■□□□□ 0.32
SH3D19-213ENST00000604922 RBM42Q9BTD8 480 aaKnown RBP17.07■□□□□ 0.32
SH3D19-213ENST00000604922 ZBTB12Q9Y330 459 aaPredicted RBP16.83■□□□□ 0.28
SH3D19-213ENST00000604922 FBLN2P98095 1184 aa16.69■□□□□ 0.26
SH3D19-213ENST00000604922 PIP4P2Q8N4L2 257 aa16.62■□□□□ 0.25
SH3D19-213ENST00000604922 HAX1O00165 279 aa16.58■□□□□ 0.24
SH3D19-213ENST00000604922 MKRN4PQ13434 485 aaPredicted RBP16.51■□□□□ 0.23
SH3D19-213ENST00000604922 AKT1S1Q96B36 256 aa16.51■□□□□ 0.23
SH3D19-213ENST00000604922 OSCARQ8IYS5 282 aa16.46■□□□□ 0.23
SH3D19-213ENST00000604922 EVX2Q03828 476 aa16.43■□□□□ 0.22
SH3D19-213ENST00000604922 REM2Q8IYK8 340 aaPredicted RBP16.41■□□□□ 0.22
SH3D19-213ENST00000604922 FXR2P51116 673 aaKnown RBP eCLIP16.33■□□□□ 0.2
SH3D19-213ENST00000604922 SPDYE2BA6NHP3 402 aa16.32■□□□□ 0.2
SH3D19-213ENST00000604922 SPDYE6P0CI01 402 aa16.32■□□□□ 0.2
SH3D19-213ENST00000604922 SPDYE2Q495Y8 402 aa16.32■□□□□ 0.2
SH3D19-213ENST00000604922 PITPNM1O00562 1244 aa16.25■□□□□ 0.19
SH3D19-213ENST00000604922 ZNF692Q9BU19 519 aaPredicted RBP16.24■□□□□ 0.19
SH3D19-213ENST00000604922 SPDYE4A6NLX3 237 aa16.14■□□□□ 0.17
SH3D19-213ENST00000604922 LHX8Q68G74 356 aa16.12■□□□□ 0.17
SH3D19-213ENST00000604922 SSUH2Q9Y2M2 353 aa16.12■□□□□ 0.17
SH3D19-213ENST00000604922 PLSCR2Q9NRY7 297 aa16.01■□□□□ 0.15
SH3D19-213ENST00000604922 PABPN1Q86U42 306 aaKnown RBP eCLIP16■□□□□ 0.15
SH3D19-213ENST00000604922 FKBP8Q14318 412 aa15.97■□□□□ 0.15
SH3D19-213ENST00000604922 GABBR2O75899 941 aa15.91■□□□□ 0.14
SH3D19-213ENST00000604922 SPDYE1Q8NFV5 336 aaPredicted RBP15.91■□□□□ 0.14
SH3D19-213ENST00000604922 C19orf67A6NJJ6 358 aa15.85■□□□□ 0.13
SH3D19-213ENST00000604922 CLEC11AQ9Y240 323 aa15.85■□□□□ 0.13
SH3D19-213ENST00000604922 PRKAR2AP13861 404 aaKnown RBP15.79■□□□□ 0.12
SH3D19-213ENST00000604922 PROM2Q8N271 834 aa15.77■□□□□ 0.12
SH3D19-213ENST00000604922 STAG3Q9UJ98 1225 aa15.76■□□□□ 0.11
SH3D19-213ENST00000604922 PRR29P0C7W0 189 aa15.68■□□□□ 0.1
SH3D19-213ENST00000604922 POTEIP0CG38 1075 aa15.63■□□□□ 0.09
SH3D19-213ENST00000604922 FBXO3Q9UK99 471 aa15.53■□□□□ 0.08
SH3D19-213ENST00000604922 CHADLQ6NUI6 762 aa15.44■□□□□ 0.06
SH3D19-213ENST00000604922 PLEKHG5O94827 1062 aa15.37■□□□□ 0.05
SH3D19-213ENST00000604922 MIER1Q8N108 512 aa15.36■□□□□ 0.05
SH3D19-213ENST00000604922 CREBZFQ9NS37 354 aa15.36■□□□□ 0.05
SH3D19-213ENST00000604922 PLCD3Q8N3E9 789 aa15.33■□□□□ 0.04
SH3D19-213ENST00000604922 FARP1Q9Y4F1 1045 aaPredicted RBP15.28■□□□□ 0.04
SH3D19-213ENST00000604922 VASPP50552 380 aaPredicted RBP15.25■□□□□ 0.03
SH3D19-213ENST00000604922 POTEMA6NI47 508 aa15.24■□□□□ 0.03
SH3D19-213ENST00000604922 OTUD5Q96G74 571 aa15.23■□□□□ 0.03
SH3D19-213ENST00000604922 NPM1P06748 294 aaKnown RBP eCLIP15.21■□□□□ 0.03
SH3D19-213ENST00000604922 CD44P16070 742 aaKnown RBP15.21■□□□□ 0.03
SH3D19-213ENST00000604922 ZBTB47Q9UFB7 747 aaPredicted RBP15.21■□□□□ 0.03
SH3D19-213ENST00000604922 POTEGQ6S5H5 508 aa15.16■□□□□ 0.02
SH3D19-213ENST00000604922 DCBLD2Q96PD2 775 aa15.16■□□□□ 0.02
SH3D19-213ENST00000604922 MNX1P50219 401 aaPredicted RBP15.15■□□□□ 0.02
SH3D19-213ENST00000604922 CLCN6P51797 869 aa15.12■□□□□ 0.01
SH3D19-213ENST00000604922 POTEB2H3BUK9 544 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 126.4 ms