RNA–Protein interactions for RNA: ENST00000604860.3

UBE3A-206, Transcript of ubiquitin protein ligase E3A, humanhuman

TSL 5

Gene UBE3A, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-206ENST00000604860 AEBP2Q6ZN18 517 aaPredicted RBP25.1■■□□□ 1.61
UBE3A-206ENST00000604860 CHIC1Q5VXU3 224 aa24.34■■□□□ 1.49
UBE3A-206ENST00000604860 PHF23Q9BUL5 403 aaPredicted RBP21.5■■□□□ 1.03
UBE3A-206ENST00000604860 SENP3Q9H4L4 574 aaPredicted RBP21.13■□□□□ 0.97
UBE3A-206ENST00000604860 FOXD1Q16676 465 aa19.73■□□□□ 0.75
UBE3A-206ENST00000604860 PLPPR3Q6T4P5 718 aa19.68■□□□□ 0.74
UBE3A-206ENST00000604860 PPP6R1Q9UPN7 881 aa19■□□□□ 0.63
UBE3A-206ENST00000604860 ADRA2BP18089 450 aa18.96■□□□□ 0.63
UBE3A-206ENST00000604860 PIAS4Q8N2W9 510 aaPredicted RBP18.55■□□□□ 0.56
UBE3A-206ENST00000604860 MSH5O43196 834 aa18.09■□□□□ 0.49
UBE3A-206ENST00000604860 PPP4R3CPQ6ZMV5 832 aa17.4■□□□□ 0.38
UBE3A-206ENST00000604860 MAPK8IP2Q13387 824 aaPredicted RBP17.26■□□□□ 0.35
UBE3A-206ENST00000604860 SCAF1Q9H7N4 1312 aaKnown RBP17.15■□□□□ 0.34
UBE3A-206ENST00000604860 KCNA4P22459 653 aa16.98■□□□□ 0.31
UBE3A-206ENST00000604860 DMRT2Q9Y5R5 561 aa16.9■□□□□ 0.3
UBE3A-206ENST00000604860 CNKSR2Q8WXI2 1034 aa16.87■□□□□ 0.29
UBE3A-206ENST00000604860 NCBP3Q53F19 620 aaKnown RBP16.81■□□□□ 0.28
UBE3A-206ENST00000604860 NPM3O75607 178 aaKnown RBP16.7■□□□□ 0.26
UBE3A-206ENST00000604860 POTEDQ86YR6 584 aa16.69■□□□□ 0.26
UBE3A-206ENST00000604860 RNF216Q9NWF9 866 aaPredicted RBP16.55■□□□□ 0.24
UBE3A-206ENST00000604860 HOXD11P31277 338 aaPredicted RBP16.53■□□□□ 0.24
UBE3A-206ENST00000604860 DCAF8L1A6NGE4 600 aa16.2■□□□□ 0.18
UBE3A-206ENST00000604860 SLC4A1APQ9BWU0 796 aaKnown RBP16.1■□□□□ 0.17
UBE3A-206ENST00000604860 DNAJC5BQ9UF47 199 aa16.1■□□□□ 0.17
UBE3A-206ENST00000604860 SLC4A2P04920 1241 aa15.82■□□□□ 0.12
UBE3A-206ENST00000604860 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.74■□□□□ 0.11
UBE3A-206ENST00000604860 ZBTB22O15209 634 aa15.69■□□□□ 0.1
UBE3A-206ENST00000604860 EHMT2Q96KQ7 1210 aa15.65■□□□□ 0.1
UBE3A-206ENST00000604860 RNF39Q9H2S5 420 aa15.57■□□□□ 0.08
UBE3A-206ENST00000604860 FOXD4L1Q9NU39 408 aa15.57■□□□□ 0.08
UBE3A-206ENST00000604860 U3KPZ7 1027 aaPredicted RBP15.55■□□□□ 0.08
UBE3A-206ENST00000604860 CSRNP3Q8WYN3 585 aa15.49■□□□□ 0.07
UBE3A-206ENST00000604860 MYCNP04198 464 aaPredicted RBP15.35■□□□□ 0.05
UBE3A-206ENST00000604860 C1QBPQ07021 282 aaKnown RBP15.3■□□□□ 0.04
UBE3A-206ENST00000604860 CACNB1Q02641 598 aaPredicted RBP15.19■□□□□ 0.02
UBE3A-206ENST00000604860 SPINK5Q9NQ38 1064 aaPredicted RBP15.16■□□□□ 0.02
UBE3A-206ENST00000604860 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.14■□□□□ 0.01
UBE3A-206ENST00000604860 HNRNPUL2Q1KMD3 747 aaKnown RBP15.14■□□□□ 0.01
UBE3A-206ENST00000604860 SAMD1Q6SPF0 538 aaPredicted RBP15.14■□□□□ 0.01
UBE3A-206ENST00000604860 ATF5Q9Y2D1 282 aaPredicted RBP15.11■□□□□ 0.01
UBE3A-206ENST00000604860 CAPN15O75808 1086 aa15.03■□□□□ -0
UBE3A-206ENST00000604860 TRHP20396 242 aaPredicted RBP14.97□□□□□ -0.01
UBE3A-206ENST00000604860 ATXN8OSP0DMR3 200 aa14.96□□□□□ -0.01
UBE3A-206ENST00000604860 APLP2Q06481 763 aa14.96□□□□□ -0.01
UBE3A-206ENST00000604860 ZNF219Q9P2Y4 722 aaPredicted RBP14.86□□□□□ -0.03
UBE3A-206ENST00000604860 ABCB7O75027 752 aa14.82□□□□□ -0.04
UBE3A-206ENST00000604860 DSG3P32926 999 aa14.81□□□□□ -0.04
UBE3A-206ENST00000604860 POLA2Q14181 598 aa14.7□□□□□ -0.06
UBE3A-206ENST00000604860 MKRN4PQ13434 485 aaPredicted RBP14.42□□□□□ -0.1
UBE3A-206ENST00000604860 ZBTB12Q9Y330 459 aaPredicted RBP14.31□□□□□ -0.12
UBE3A-206ENST00000604860 FBLN2P98095 1184 aa14.28□□□□□ -0.12
UBE3A-206ENST00000604860 OSCARQ8IYS5 282 aa14.24□□□□□ -0.13
UBE3A-206ENST00000604860 SPDYE2BA6NHP3 402 aa13.99□□□□□ -0.17
UBE3A-206ENST00000604860 SPDYE6P0CI01 402 aa13.99□□□□□ -0.17
UBE3A-206ENST00000604860 SPDYE2Q495Y8 402 aa13.99□□□□□ -0.17
UBE3A-206ENST00000604860 RBM42Q9BTD8 480 aaKnown RBP13.99□□□□□ -0.17
UBE3A-206ENST00000604860 SPDYE4A6NLX3 237 aa13.98□□□□□ -0.17
UBE3A-206ENST00000604860 FKBP8Q14318 412 aa13.98□□□□□ -0.17
UBE3A-206ENST00000604860 ZNF692Q9BU19 519 aaPredicted RBP13.96□□□□□ -0.17
UBE3A-206ENST00000604860 SSUH2Q9Y2M2 353 aa13.93□□□□□ -0.18
UBE3A-206ENST00000604860 AKT1S1Q96B36 256 aa13.85□□□□□ -0.19
UBE3A-206ENST00000604860 PABPN1Q86U42 306 aaKnown RBP eCLIP13.81□□□□□ -0.2
UBE3A-206ENST00000604860 REM2Q8IYK8 340 aaPredicted RBP13.78□□□□□ -0.2
UBE3A-206ENST00000604860 PROM2Q8N271 834 aa13.75□□□□□ -0.21
UBE3A-206ENST00000604860 PITPNM1O00562 1244 aa13.65□□□□□ -0.22
UBE3A-206ENST00000604860 CLEC11AQ9Y240 323 aa13.59□□□□□ -0.23
UBE3A-206ENST00000604860 SPDYE1Q8NFV5 336 aaPredicted RBP13.58□□□□□ -0.24
UBE3A-206ENST00000604860 CHRDL2Q6WN34 429 aa13.52□□□□□ -0.25
UBE3A-206ENST00000604860 STAG3Q9UJ98 1225 aa13.44□□□□□ -0.26
UBE3A-206ENST00000604860 PRR29P0C7W0 189 aa13.42□□□□□ -0.26
UBE3A-206ENST00000604860 FXR2P51116 673 aaKnown RBP eCLIP13.38□□□□□ -0.27
UBE3A-206ENST00000604860 PIP4P2Q8N4L2 257 aa13.37□□□□□ -0.27
UBE3A-206ENST00000604860 FBXO3Q9UK99 471 aa13.36□□□□□ -0.27
UBE3A-206ENST00000604860 CHADLQ6NUI6 762 aa13.34□□□□□ -0.27
UBE3A-206ENST00000604860 CREBZFQ9NS37 354 aa13.31□□□□□ -0.28
UBE3A-206ENST00000604860 PRKAR2AP13861 404 aaKnown RBP13.28□□□□□ -0.28
UBE3A-206ENST00000604860 VASPP50552 380 aaPredicted RBP13.28□□□□□ -0.28
UBE3A-206ENST00000604860 MIER1Q8N108 512 aa13.25□□□□□ -0.29
UBE3A-206ENST00000604860 PLCD3Q8N3E9 789 aa13.21□□□□□ -0.29
UBE3A-206ENST00000604860 MNX1P50219 401 aaPredicted RBP13.18□□□□□ -0.3
UBE3A-206ENST00000604860 POTEHQ6S545 545 aa13.17□□□□□ -0.3
UBE3A-206ENST00000604860 IFNLR1Q8IU57 520 aaPredicted RBP13.15□□□□□ -0.3
UBE3A-206ENST00000604860 FARP1Q9Y4F1 1045 aaPredicted RBP13.13□□□□□ -0.31
UBE3A-206ENST00000604860 PLEKHG5O94827 1062 aa13.06□□□□□ -0.32
UBE3A-206ENST00000604860 KLHL34Q8N239 644 aa13.05□□□□□ -0.32
UBE3A-206ENST00000604860 NPM1P06748 294 aaKnown RBP eCLIP12.96□□□□□ -0.33
UBE3A-206ENST00000604860 NUBP1P53384 320 aa12.96□□□□□ -0.33
UBE3A-206ENST00000604860 ZBTB47Q9UFB7 747 aaPredicted RBP12.96□□□□□ -0.33
UBE3A-206ENST00000604860 RASEFQ8IZ41 740 aa12.95□□□□□ -0.34
UBE3A-206ENST00000604860 EVX2Q03828 476 aa12.94□□□□□ -0.34
UBE3A-206ENST00000604860 C19orf67A6NJJ6 358 aa12.93□□□□□ -0.34
UBE3A-206ENST00000604860 HAX1O00165 279 aa12.92□□□□□ -0.34
UBE3A-206ENST00000604860 SPOCK2Q92563 424 aa12.92□□□□□ -0.34
UBE3A-206ENST00000604860 CD44P16070 742 aaKnown RBP12.89□□□□□ -0.35
UBE3A-206ENST00000604860 TSPYL2Q9H2G4 693 aaPredicted RBP12.86□□□□□ -0.35
UBE3A-206ENST00000604860 ZRANB1Q9UGI0 708 aa12.81□□□□□ -0.36
UBE3A-206ENST00000604860 DCAF8Q5TAQ9 597 aa12.79□□□□□ -0.36
UBE3A-206ENST00000604860 FAM212AQ96EL1 285 aa12.77□□□□□ -0.37
UBE3A-206ENST00000604860 CIZ1Q9ULV3 898 aaPredicted RBP12.77□□□□□ -0.37
UBE3A-206ENST00000604860 CCDC61Q9Y6R9 512 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 214.9 ms