RNA–Protein interactions for RNA: ENST00000604133.1

SRGAP2-208, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 5

Gene SRGAP2, Length 542 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-208ENST00000604133 AEBP2Q6ZN18 517 aaPredicted RBP26.5■■□□□ 1.83
SRGAP2-208ENST00000604133 CHIC1Q5VXU3 224 aa26.07■■□□□ 1.76
SRGAP2-208ENST00000604133 PHF23Q9BUL5 403 aaPredicted RBP23.06■■□□□ 1.28
SRGAP2-208ENST00000604133 SENP3Q9H4L4 574 aaPredicted RBP22.28■■□□□ 1.16
SRGAP2-208ENST00000604133 PLPPR3Q6T4P5 718 aa21.27■■□□□ 1
SRGAP2-208ENST00000604133 FOXD1Q16676 465 aa20.75■□□□□ 0.91
SRGAP2-208ENST00000604133 ADRA2BP18089 450 aa20.27■□□□□ 0.84
SRGAP2-208ENST00000604133 PPP6R1Q9UPN7 881 aa20.26■□□□□ 0.83
SRGAP2-208ENST00000604133 PIAS4Q8N2W9 510 aaPredicted RBP19.63■□□□□ 0.73
SRGAP2-208ENST00000604133 MSH5O43196 834 aa18.88■□□□□ 0.61
SRGAP2-208ENST00000604133 PPP4R3CPQ6ZMV5 832 aa18.85■□□□□ 0.61
SRGAP2-208ENST00000604133 KCNA4P22459 653 aa18.84■□□□□ 0.61
SRGAP2-208ENST00000604133 NCBP3Q53F19 620 aaKnown RBP18.35■□□□□ 0.53
SRGAP2-208ENST00000604133 SCAF1Q9H7N4 1312 aaKnown RBP18.34■□□□□ 0.53
SRGAP2-208ENST00000604133 MAPK8IP2Q13387 824 aaPredicted RBP18.33■□□□□ 0.52
SRGAP2-208ENST00000604133 NPM3O75607 178 aaKnown RBP18.19■□□□□ 0.5
SRGAP2-208ENST00000604133 CNKSR2Q8WXI2 1034 aa18.18■□□□□ 0.5
SRGAP2-208ENST00000604133 SLC4A1APQ9BWU0 796 aaKnown RBP17.94■□□□□ 0.46
SRGAP2-208ENST00000604133 EHMT2Q96KQ7 1210 aa17.91■□□□□ 0.46
SRGAP2-208ENST00000604133 DMRT2Q9Y5R5 561 aa17.86■□□□□ 0.45
SRGAP2-208ENST00000604133 RNF216Q9NWF9 866 aaPredicted RBP17.75■□□□□ 0.43
SRGAP2-208ENST00000604133 HOXD11P31277 338 aaPredicted RBP17.6■□□□□ 0.41
SRGAP2-208ENST00000604133 CSRNP3Q8WYN3 585 aa17.48■□□□□ 0.39
SRGAP2-208ENST00000604133 DNAJC5BQ9UF47 199 aa17.43■□□□□ 0.38
SRGAP2-208ENST00000604133 ZBTB22O15209 634 aa17.38■□□□□ 0.37
SRGAP2-208ENST00000604133 DCAF8L1A6NGE4 600 aa17.18■□□□□ 0.34
SRGAP2-208ENST00000604133 FOXD4L1Q9NU39 408 aa17.15■□□□□ 0.34
SRGAP2-208ENST00000604133 SLC4A2P04920 1241 aa17.13■□□□□ 0.33
SRGAP2-208ENST00000604133 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.82■□□□□ 0.28
SRGAP2-208ENST00000604133 POTEDQ86YR6 584 aa16.75■□□□□ 0.27
SRGAP2-208ENST00000604133 MYCNP04198 464 aaPredicted RBP16.73■□□□□ 0.27
SRGAP2-208ENST00000604133 U3KPZ7 1027 aaPredicted RBP16.62■□□□□ 0.25
SRGAP2-208ENST00000604133 ATXN8OSP0DMR3 200 aa16.43■□□□□ 0.22
SRGAP2-208ENST00000604133 ATF5Q9Y2D1 282 aaPredicted RBP16.42■□□□□ 0.22
SRGAP2-208ENST00000604133 SAMD1Q6SPF0 538 aaPredicted RBP16.35■□□□□ 0.21
SRGAP2-208ENST00000604133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.34■□□□□ 0.21
SRGAP2-208ENST00000604133 HNRNPUL2Q1KMD3 747 aaKnown RBP16.34■□□□□ 0.21
SRGAP2-208ENST00000604133 RNF39Q9H2S5 420 aa16.27■□□□□ 0.2
SRGAP2-208ENST00000604133 SPINK5Q9NQ38 1064 aaPredicted RBP16.11■□□□□ 0.17
SRGAP2-208ENST00000604133 APLP2Q06481 763 aa16.07■□□□□ 0.16
SRGAP2-208ENST00000604133 ZNF219Q9P2Y4 722 aaPredicted RBP16.03■□□□□ 0.16
SRGAP2-208ENST00000604133 C1QBPQ07021 282 aaKnown RBP16.02■□□□□ 0.16
SRGAP2-208ENST00000604133 TRHP20396 242 aaPredicted RBP16.01■□□□□ 0.15
SRGAP2-208ENST00000604133 CAPN15O75808 1086 aa15.98■□□□□ 0.15
SRGAP2-208ENST00000604133 POLA2Q14181 598 aa15.79■□□□□ 0.12
SRGAP2-208ENST00000604133 FKBP8Q14318 412 aa15.79■□□□□ 0.12
SRGAP2-208ENST00000604133 ABCB7O75027 752 aa15.78■□□□□ 0.12
SRGAP2-208ENST00000604133 MKRN4PQ13434 485 aaPredicted RBP15.68■□□□□ 0.1
SRGAP2-208ENST00000604133 CACNB1Q02641 598 aaPredicted RBP15.65■□□□□ 0.1
SRGAP2-208ENST00000604133 DSG3P32926 999 aa15.61■□□□□ 0.09
SRGAP2-208ENST00000604133 FBLN2P98095 1184 aa15.55■□□□□ 0.08
SRGAP2-208ENST00000604133 SPDYE4A6NLX3 237 aa15.42■□□□□ 0.06
SRGAP2-208ENST00000604133 ZBTB12Q9Y330 459 aaPredicted RBP15.41■□□□□ 0.06
SRGAP2-208ENST00000604133 OSCARQ8IYS5 282 aa15.28■□□□□ 0.04
SRGAP2-208ENST00000604133 PROM2Q8N271 834 aa15.16■□□□□ 0.02
SRGAP2-208ENST00000604133 ZNF692Q9BU19 519 aaPredicted RBP15.12■□□□□ 0.01
SRGAP2-208ENST00000604133 SPDYE2BA6NHP3 402 aa15.07■□□□□ 0
SRGAP2-208ENST00000604133 SPDYE6P0CI01 402 aa15.07■□□□□ 0
SRGAP2-208ENST00000604133 SPDYE2Q495Y8 402 aa15.07■□□□□ 0
SRGAP2-208ENST00000604133 SSUH2Q9Y2M2 353 aa15.02■□□□□ -0
SRGAP2-208ENST00000604133 FBXO3Q9UK99 471 aa14.99□□□□□ -0.01
SRGAP2-208ENST00000604133 PABPN1Q86U42 306 aaKnown RBP eCLIP14.96□□□□□ -0.01
SRGAP2-208ENST00000604133 RTN4Q9NQC3 1192 aaKnown RBP14.96□□□□□ -0.01
SRGAP2-208ENST00000604133 VASPP50552 380 aaPredicted RBP14.89□□□□□ -0.03
SRGAP2-208ENST00000604133 AMER1Q5JTC6 1135 aaPredicted RBP14.84□□□□□ -0.03
SRGAP2-208ENST00000604133 RBM42Q9BTD8 480 aaKnown RBP14.76□□□□□ -0.05
SRGAP2-208ENST00000604133 IFNLR1Q8IU57 520 aaPredicted RBP14.74□□□□□ -0.05
SRGAP2-208ENST00000604133 AKT1S1Q96B36 256 aa14.68□□□□□ -0.06
SRGAP2-208ENST00000604133 STAG3Q9UJ98 1225 aa14.67□□□□□ -0.06
SRGAP2-208ENST00000604133 REM2Q8IYK8 340 aaPredicted RBP14.62□□□□□ -0.07
SRGAP2-208ENST00000604133 PLCD3Q8N3E9 789 aa14.61□□□□□ -0.07
SRGAP2-208ENST00000604133 MIER1Q8N108 512 aa14.59□□□□□ -0.07
SRGAP2-208ENST00000604133 CLEC11AQ9Y240 323 aa14.58□□□□□ -0.08
SRGAP2-208ENST00000604133 KLHL34Q8N239 644 aa14.57□□□□□ -0.08
SRGAP2-208ENST00000604133 SPDYE1Q8NFV5 336 aaPredicted RBP14.56□□□□□ -0.08
SRGAP2-208ENST00000604133 PITPNM1O00562 1244 aa14.48□□□□□ -0.09
SRGAP2-208ENST00000604133 SPOCK2Q92563 424 aa14.45□□□□□ -0.1
SRGAP2-208ENST00000604133 PRR29P0C7W0 189 aa14.43□□□□□ -0.1
SRGAP2-208ENST00000604133 PLEKHG5O94827 1062 aa14.38□□□□□ -0.11
SRGAP2-208ENST00000604133 PKD2Q13563 968 aa14.37□□□□□ -0.11
SRGAP2-208ENST00000604133 CREBZFQ9NS37 354 aa14.37□□□□□ -0.11
SRGAP2-208ENST00000604133 ZBTB47Q9UFB7 747 aaPredicted RBP14.29□□□□□ -0.12
SRGAP2-208ENST00000604133 MNX1P50219 401 aaPredicted RBP14.24□□□□□ -0.13
SRGAP2-208ENST00000604133 CHADLQ6NUI6 762 aa14.24□□□□□ -0.13
SRGAP2-208ENST00000604133 CIZ1Q9ULV3 898 aaPredicted RBP14.24□□□□□ -0.13
SRGAP2-208ENST00000604133 ECM2O94769 699 aaPredicted RBP14.2□□□□□ -0.14
SRGAP2-208ENST00000604133 DCAF8L2P0C7V8 631 aa14.2□□□□□ -0.14
SRGAP2-208ENST00000604133 NUBP1P53384 320 aa14.19□□□□□ -0.14
SRGAP2-208ENST00000604133 RGL2O15211 777 aa14.11□□□□□ -0.15
SRGAP2-208ENST00000604133 CHRDL2Q6WN34 429 aa14.11□□□□□ -0.15
SRGAP2-208ENST00000604133 RASEFQ8IZ41 740 aa14.11□□□□□ -0.15
SRGAP2-208ENST00000604133 PRKAR2AP13861 404 aaKnown RBP14.1□□□□□ -0.15
SRGAP2-208ENST00000604133 DCAF8Q5TAQ9 597 aa14.09□□□□□ -0.15
SRGAP2-208ENST00000604133 FXR2P51116 673 aaKnown RBP eCLIP14.08□□□□□ -0.16
SRGAP2-208ENST00000604133 PIP4P2Q8N4L2 257 aa14.04□□□□□ -0.16
SRGAP2-208ENST00000604133 FARP1Q9Y4F1 1045 aaPredicted RBP14.04□□□□□ -0.16
SRGAP2-208ENST00000604133 NPM1P06748 294 aaKnown RBP eCLIP14.03□□□□□ -0.16
SRGAP2-208ENST00000604133 GSE1Q14687 1217 aa14.03□□□□□ -0.16
SRGAP2-208ENST00000604133 FAM212AQ96EL1 285 aa14.03□□□□□ -0.16
SRGAP2-208ENST00000604133 SLC24A1O60721 1099 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 567.3 ms