RNA–Protein interactions for RNA: ENST00000603695.1

FOCAD-209, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-209ENST00000603695 AEBP2Q6ZN18 517 aaPredicted RBP25.52■■□□□ 1.68
FOCAD-209ENST00000603695 CHIC1Q5VXU3 224 aa23.66■■□□□ 1.38
FOCAD-209ENST00000603695 SENP3Q9H4L4 574 aaPredicted RBP21.71■■□□□ 1.07
FOCAD-209ENST00000603695 PHF23Q9BUL5 403 aaPredicted RBP21.4■■□□□ 1.02
FOCAD-209ENST00000603695 FOXD1Q16676 465 aa20.42■□□□□ 0.86
FOCAD-209ENST00000603695 POTEDQ86YR6 584 aa20.03■□□□□ 0.8
FOCAD-209ENST00000603695 MSH5O43196 834 aa19.24■□□□□ 0.67
FOCAD-209ENST00000603695 PIAS4Q8N2W9 510 aaPredicted RBP18.88■□□□□ 0.61
FOCAD-209ENST00000603695 PPP6R1Q9UPN7 881 aa18.64■□□□□ 0.57
FOCAD-209ENST00000603695 ADRA2BP18089 450 aa18.52■□□□□ 0.56
FOCAD-209ENST00000603695 PLPPR3Q6T4P5 718 aa18.41■□□□□ 0.54
FOCAD-209ENST00000603695 MAPK8IP2Q13387 824 aaPredicted RBP17.24■□□□□ 0.35
FOCAD-209ENST00000603695 DMRT2Q9Y5R5 561 aa17.15■□□□□ 0.34
FOCAD-209ENST00000603695 CACNB1Q02641 598 aaPredicted RBP16.97■□□□□ 0.31
FOCAD-209ENST00000603695 SCAF1Q9H7N4 1312 aaKnown RBP16.75■□□□□ 0.27
FOCAD-209ENST00000603695 DCAF8L1A6NGE4 600 aa16.5■□□□□ 0.23
FOCAD-209ENST00000603695 RNF39Q9H2S5 420 aa16.43■□□□□ 0.22
FOCAD-209ENST00000603695 HOXD11P31277 338 aaPredicted RBP16.26■□□□□ 0.19
FOCAD-209ENST00000603695 PPP4R3CPQ6ZMV5 832 aa16.11■□□□□ 0.17
FOCAD-209ENST00000603695 C1QBPQ07021 282 aaKnown RBP16.07■□□□□ 0.16
FOCAD-209ENST00000603695 RNF216Q9NWF9 866 aaPredicted RBP15.93■□□□□ 0.14
FOCAD-209ENST00000603695 CNKSR2Q8WXI2 1034 aa15.9■□□□□ 0.14
FOCAD-209ENST00000603695 DNAJC5BQ9UF47 199 aa15.72■□□□□ 0.11
FOCAD-209ENST00000603695 POTEHQ6S545 545 aa15.53■□□□□ 0.08
FOCAD-209ENST00000603695 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.47■□□□□ 0.07
FOCAD-209ENST00000603695 DSG3P32926 999 aa15.18■□□□□ 0.02
FOCAD-209ENST00000603695 NCBP3Q53F19 620 aaKnown RBP15.17■□□□□ 0.02
FOCAD-209ENST00000603695 SPINK5Q9NQ38 1064 aaPredicted RBP15.16■□□□□ 0.02
FOCAD-209ENST00000603695 U3KPZ7 1027 aaPredicted RBP15.14■□□□□ 0.01
FOCAD-209ENST00000603695 NPM3O75607 178 aaKnown RBP15.09■□□□□ 0.01
FOCAD-209ENST00000603695 CAPN15O75808 1086 aa15.08■□□□□ 0
FOCAD-209ENST00000603695 ABCB7O75027 752 aa14.74□□□□□ -0.05
FOCAD-209ENST00000603695 TRHP20396 242 aaPredicted RBP14.7□□□□□ -0.06
FOCAD-209ENST00000603695 SLC4A2P04920 1241 aa14.62□□□□□ -0.07
FOCAD-209ENST00000603695 ZNF219Q9P2Y4 722 aaPredicted RBP14.56□□□□□ -0.08
FOCAD-209ENST00000603695 APLP2Q06481 763 aa14.44□□□□□ -0.1
FOCAD-209ENST00000603695 CHRDL2Q6WN34 429 aa14.42□□□□□ -0.1
FOCAD-209ENST00000603695 RBM42Q9BTD8 480 aaKnown RBP14.38□□□□□ -0.11
FOCAD-209ENST00000603695 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.3□□□□□ -0.12
FOCAD-209ENST00000603695 HNRNPUL2Q1KMD3 747 aaKnown RBP14.3□□□□□ -0.12
FOCAD-209ENST00000603695 KCNA4P22459 653 aa14.25□□□□□ -0.13
FOCAD-209ENST00000603695 SAMD1Q6SPF0 538 aaPredicted RBP14.24□□□□□ -0.13
FOCAD-209ENST00000603695 SP7Q8TDD2 431 aaPredicted RBP14.24□□□□□ -0.13
FOCAD-209ENST00000603695 POLA2Q14181 598 aa14.15□□□□□ -0.14
FOCAD-209ENST00000603695 PIP4P2Q8N4L2 257 aa13.97□□□□□ -0.17
FOCAD-209ENST00000603695 AKT1S1Q96B36 256 aa13.95□□□□□ -0.18
FOCAD-209ENST00000603695 MYCNP04198 464 aaPredicted RBP13.9□□□□□ -0.18
FOCAD-209ENST00000603695 REM2Q8IYK8 340 aaPredicted RBP13.88□□□□□ -0.19
FOCAD-209ENST00000603695 HAX1O00165 279 aa13.85□□□□□ -0.19
FOCAD-209ENST00000603695 ATF5Q9Y2D1 282 aaPredicted RBP13.79□□□□□ -0.2
FOCAD-209ENST00000603695 PITPNM1O00562 1244 aa13.77□□□□□ -0.21
FOCAD-209ENST00000603695 OSCARQ8IYS5 282 aa13.77□□□□□ -0.21
FOCAD-209ENST00000603695 EVX2Q03828 476 aa13.76□□□□□ -0.21
FOCAD-209ENST00000603695 FXR2P51116 673 aaKnown RBP eCLIP13.74□□□□□ -0.21
FOCAD-209ENST00000603695 ZBTB12Q9Y330 459 aaPredicted RBP13.68□□□□□ -0.22
FOCAD-209ENST00000603695 FOXD4L1Q9NU39 408 aa13.41□□□□□ -0.26
FOCAD-209ENST00000603695 PRKAR2AP13861 404 aaKnown RBP13.38□□□□□ -0.27
FOCAD-209ENST00000603695 C19orf67A6NJJ6 358 aa13.34□□□□□ -0.27
FOCAD-209ENST00000603695 LHX8Q68G74 356 aa13.34□□□□□ -0.27
FOCAD-209ENST00000603695 GABBR2O75899 941 aa13.32□□□□□ -0.28
FOCAD-209ENST00000603695 SPDYE2BA6NHP3 402 aa13.26□□□□□ -0.29
FOCAD-209ENST00000603695 SPDYE6P0CI01 402 aa13.26□□□□□ -0.29
FOCAD-209ENST00000603695 SPDYE2Q495Y8 402 aa13.26□□□□□ -0.29
FOCAD-209ENST00000603695 CLEC11AQ9Y240 323 aa13.26□□□□□ -0.29
FOCAD-209ENST00000603695 SLC4A1APQ9BWU0 796 aaKnown RBP13.25□□□□□ -0.29
FOCAD-209ENST00000603695 SPDYE1Q8NFV5 336 aaPredicted RBP13.18□□□□□ -0.3
FOCAD-209ENST00000603695 ZBTB22O15209 634 aa13.15□□□□□ -0.3
FOCAD-209ENST00000603695 CHADLQ6NUI6 762 aa13.15□□□□□ -0.3
FOCAD-209ENST00000603695 POTEIP0CG38 1075 aa13.1□□□□□ -0.31
FOCAD-209ENST00000603695 FBLN2P98095 1184 aa13.1□□□□□ -0.31
FOCAD-209ENST00000603695 MKRN4PQ13434 485 aaPredicted RBP13.08□□□□□ -0.32
FOCAD-209ENST00000603695 PLSCR2Q9NRY7 297 aa13.07□□□□□ -0.32
FOCAD-209ENST00000603695 SSUH2Q9Y2M2 353 aa13.07□□□□□ -0.32
FOCAD-209ENST00000603695 ZNF692Q9BU19 519 aaPredicted RBP13.03□□□□□ -0.32
FOCAD-209ENST00000603695 ATXN8OSP0DMR3 200 aa13□□□□□ -0.33
FOCAD-209ENST00000603695 PRR29P0C7W0 189 aa12.91□□□□□ -0.34
FOCAD-209ENST00000603695 CD44P16070 742 aaKnown RBP12.91□□□□□ -0.34
FOCAD-209ENST00000603695 PABPN1Q86U42 306 aaKnown RBP eCLIP12.85□□□□□ -0.35
FOCAD-209ENST00000603695 FARP1Q9Y4F1 1045 aaPredicted RBP12.81□□□□□ -0.36
FOCAD-209ENST00000603695 DCBLD2Q96PD2 775 aa12.76□□□□□ -0.37
FOCAD-209ENST00000603695 OTUD5Q96G74 571 aa12.71□□□□□ -0.37
FOCAD-209ENST00000603695 CLCN6P51797 869 aa12.69□□□□□ -0.38
FOCAD-209ENST00000603695 POTEB2H3BUK9 544 aa12.67□□□□□ -0.38
FOCAD-209ENST00000603695 ZNF579Q8NAF0 562 aaKnown RBP12.66□□□□□ -0.38
FOCAD-209ENST00000603695 GALR2O43603 387 aaPredicted RBP12.62□□□□□ -0.39
FOCAD-209ENST00000603695 ZRANB1Q9UGI0 708 aa12.62□□□□□ -0.39
FOCAD-209ENST00000603695 POTEMA6NI47 508 aa12.61□□□□□ -0.39
FOCAD-209ENST00000603695 POTEGQ6S5H5 508 aa12.56□□□□□ -0.4
FOCAD-209ENST00000603695 CREBZFQ9NS37 354 aa12.5□□□□□ -0.41
FOCAD-209ENST00000603695 PELP1Q8IZL8 1130 aaKnown RBP12.47□□□□□ -0.41
FOCAD-209ENST00000603695 PHF12Q96QT6 1004 aa12.45□□□□□ -0.42
FOCAD-209ENST00000603695 POTEJP0CG39 1038 aa12.39□□□□□ -0.43
FOCAD-209ENST00000603695 LCE2DQ5TA82 110 aaPredicted RBP12.35□□□□□ -0.43
FOCAD-209ENST00000603695 METRNQ9UJH8 293 aa12.31□□□□□ -0.44
FOCAD-209ENST00000603695 PCDH10Q9P2E7 1040 aa12.3□□□□□ -0.44
FOCAD-209ENST00000603695 PAK3O75914 559 aaPredicted RBP12.27□□□□□ -0.45
FOCAD-209ENST00000603695 ASTLQ6HA08 431 aaPredicted RBP12.26□□□□□ -0.45
FOCAD-209ENST00000603695 ATMINO43313 823 aaPredicted RBP12.24□□□□□ -0.45
FOCAD-209ENST00000603695 MS4A3Q96HJ5 214 aa12.24□□□□□ -0.45
FOCAD-209ENST00000603695 STAG3Q9UJ98 1225 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms