RNA–Protein interactions for RNA: ENST00000603044.5

FOCAD-203, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-203ENST00000603044 AEBP2Q6ZN18 517 aaPredicted RBP37.3■■■■□ 3.56
FOCAD-203ENST00000603044 CHIC1Q5VXU3 224 aa36.38■■■■□ 3.41
FOCAD-203ENST00000603044 PHF23Q9BUL5 403 aaPredicted RBP31.95■■■□□ 2.71
FOCAD-203ENST00000603044 SENP3Q9H4L4 574 aaPredicted RBP31.71■■■□□ 2.67
FOCAD-203ENST00000603044 PLPPR3Q6T4P5 718 aa29.47■■■□□ 2.31
FOCAD-203ENST00000603044 FOXD1Q16676 465 aa29.4■■■□□ 2.3
FOCAD-203ENST00000603044 PPP6R1Q9UPN7 881 aa28.18■■■□□ 2.1
FOCAD-203ENST00000603044 ADRA2BP18089 450 aa28.09■■■□□ 2.09
FOCAD-203ENST00000603044 PIAS4Q8N2W9 510 aaPredicted RBP27.64■■■□□ 2.02
FOCAD-203ENST00000603044 MSH5O43196 834 aa27.2■■□□□ 1.94
FOCAD-203ENST00000603044 PPP4R3CPQ6ZMV5 832 aa25.91■■□□□ 1.74
FOCAD-203ENST00000603044 SCAF1Q9H7N4 1312 aaKnown RBP25.79■■□□□ 1.72
FOCAD-203ENST00000603044 MAPK8IP2Q13387 824 aaPredicted RBP25.5■■□□□ 1.67
FOCAD-203ENST00000603044 DMRT2Q9Y5R5 561 aa25.32■■□□□ 1.64
FOCAD-203ENST00000603044 CNKSR2Q8WXI2 1034 aa25.26■■□□□ 1.63
FOCAD-203ENST00000603044 NCBP3Q53F19 620 aaKnown RBP25.22■■□□□ 1.63
FOCAD-203ENST00000603044 KCNA4P22459 653 aa25.16■■□□□ 1.62
FOCAD-203ENST00000603044 POTEDQ86YR6 584 aa24.91■■□□□ 1.58
FOCAD-203ENST00000603044 NPM3O75607 178 aaKnown RBP24.85■■□□□ 1.57
FOCAD-203ENST00000603044 RNF216Q9NWF9 866 aaPredicted RBP24.82■■□□□ 1.56
FOCAD-203ENST00000603044 HOXD11P31277 338 aaPredicted RBP24.79■■□□□ 1.56
FOCAD-203ENST00000603044 DNAJC5BQ9UF47 199 aa24.43■■□□□ 1.5
FOCAD-203ENST00000603044 DCAF8L1A6NGE4 600 aa23.97■■□□□ 1.43
FOCAD-203ENST00000603044 SLC4A1APQ9BWU0 796 aaKnown RBP23.93■■□□□ 1.42
FOCAD-203ENST00000603044 SLC4A2P04920 1241 aa23.51■■□□□ 1.35
FOCAD-203ENST00000603044 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.45■■□□□ 1.34
FOCAD-203ENST00000603044 RNF39Q9H2S5 420 aa23.31■■□□□ 1.32
FOCAD-203ENST00000603044 FOXD4L1Q9NU39 408 aa23.24■■□□□ 1.31
FOCAD-203ENST00000603044 ZBTB22O15209 634 aa23.18■■□□□ 1.3
FOCAD-203ENST00000603044 U3KPZ7 1027 aaPredicted RBP23.14■■□□□ 1.29
FOCAD-203ENST00000603044 C1QBPQ07021 282 aaKnown RBP23.04■■□□□ 1.28
FOCAD-203ENST00000603044 MYCNP04198 464 aaPredicted RBP22.99■■□□□ 1.27
FOCAD-203ENST00000603044 EHMT2Q96KQ7 1210 aa22.99■■□□□ 1.27
FOCAD-203ENST00000603044 CSRNP3Q8WYN3 585 aa22.94■■□□□ 1.26
FOCAD-203ENST00000603044 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.85■■□□□ 1.25
FOCAD-203ENST00000603044 HNRNPUL2Q1KMD3 747 aaKnown RBP22.85■■□□□ 1.25
FOCAD-203ENST00000603044 SAMD1Q6SPF0 538 aaPredicted RBP22.75■■□□□ 1.23
FOCAD-203ENST00000603044 CACNB1Q02641 598 aaPredicted RBP22.65■■□□□ 1.22
FOCAD-203ENST00000603044 APLP2Q06481 763 aa22.64■■□□□ 1.21
FOCAD-203ENST00000603044 ATXN8OSP0DMR3 200 aa22.54■■□□□ 1.2
FOCAD-203ENST00000603044 SPINK5Q9NQ38 1064 aaPredicted RBP22.46■■□□□ 1.19
FOCAD-203ENST00000603044 CAPN15O75808 1086 aa22.33■■□□□ 1.17
FOCAD-203ENST00000603044 ZNF219Q9P2Y4 722 aaPredicted RBP22.32■■□□□ 1.16
FOCAD-203ENST00000603044 ATF5Q9Y2D1 282 aaPredicted RBP22.31■■□□□ 1.16
FOCAD-203ENST00000603044 TRHP20396 242 aaPredicted RBP22.17■■□□□ 1.14
FOCAD-203ENST00000603044 DSG3P32926 999 aa22.11■■□□□ 1.13
FOCAD-203ENST00000603044 ABCB7O75027 752 aa21.87■■□□□ 1.09
FOCAD-203ENST00000603044 POLA2Q14181 598 aa21.86■■□□□ 1.09
FOCAD-203ENST00000603044 ZBTB12Q9Y330 459 aaPredicted RBP21.61■■□□□ 1.05
FOCAD-203ENST00000603044 FBLN2P98095 1184 aa21.39■■□□□ 1.01
FOCAD-203ENST00000603044 MKRN4PQ13434 485 aaPredicted RBP21.39■■□□□ 1.01
FOCAD-203ENST00000603044 OSCARQ8IYS5 282 aa21.12■□□□□ 0.97
FOCAD-203ENST00000603044 RBM42Q9BTD8 480 aaKnown RBP21.09■□□□□ 0.97
FOCAD-203ENST00000603044 SPDYE2BA6NHP3 402 aa21.01■□□□□ 0.95
FOCAD-203ENST00000603044 SPDYE6P0CI01 402 aa21.01■□□□□ 0.95
FOCAD-203ENST00000603044 SPDYE2Q495Y8 402 aa21.01■□□□□ 0.95
FOCAD-203ENST00000603044 SSUH2Q9Y2M2 353 aa20.87■□□□□ 0.93
FOCAD-203ENST00000603044 AKT1S1Q96B36 256 aa20.81■□□□□ 0.92
FOCAD-203ENST00000603044 SPDYE4A6NLX3 237 aa20.8■□□□□ 0.92
FOCAD-203ENST00000603044 ZNF692Q9BU19 519 aaPredicted RBP20.8■□□□□ 0.92
FOCAD-203ENST00000603044 FKBP8Q14318 412 aa20.66■□□□□ 0.9
FOCAD-203ENST00000603044 PROM2Q8N271 834 aa20.64■□□□□ 0.89
FOCAD-203ENST00000603044 REM2Q8IYK8 340 aaPredicted RBP20.56■□□□□ 0.88
FOCAD-203ENST00000603044 PABPN1Q86U42 306 aaKnown RBP eCLIP20.52■□□□□ 0.88
FOCAD-203ENST00000603044 SPDYE1Q8NFV5 336 aaPredicted RBP20.37■□□□□ 0.85
FOCAD-203ENST00000603044 PITPNM1O00562 1244 aa20.32■□□□□ 0.84
FOCAD-203ENST00000603044 STAG3Q9UJ98 1225 aa20.25■□□□□ 0.83
FOCAD-203ENST00000603044 CHRDL2Q6WN34 429 aa20.21■□□□□ 0.83
FOCAD-203ENST00000603044 CLEC11AQ9Y240 323 aa20.13■□□□□ 0.81
FOCAD-203ENST00000603044 FBXO3Q9UK99 471 aa20.06■□□□□ 0.8
FOCAD-203ENST00000603044 FXR2P51116 673 aaKnown RBP eCLIP20.03■□□□□ 0.8
FOCAD-203ENST00000603044 PRR29P0C7W0 189 aa20.01■□□□□ 0.79
FOCAD-203ENST00000603044 PIP4P2Q8N4L2 257 aa19.93■□□□□ 0.78
FOCAD-203ENST00000603044 CREBZFQ9NS37 354 aa19.81■□□□□ 0.76
FOCAD-203ENST00000603044 PRKAR2AP13861 404 aaKnown RBP19.77■□□□□ 0.76
FOCAD-203ENST00000603044 VASPP50552 380 aaPredicted RBP19.77■□□□□ 0.76
FOCAD-203ENST00000603044 POTEHQ6S545 545 aa19.7■□□□□ 0.74
FOCAD-203ENST00000603044 CHADLQ6NUI6 762 aa19.69■□□□□ 0.74
FOCAD-203ENST00000603044 MIER1Q8N108 512 aa19.67■□□□□ 0.74
FOCAD-203ENST00000603044 MNX1P50219 401 aaPredicted RBP19.65■□□□□ 0.74
FOCAD-203ENST00000603044 NISCHQ9Y2I1 1504 aa19.64■□□□□ 0.73
FOCAD-203ENST00000603044 PLCD3Q8N3E9 789 aa19.63■□□□□ 0.73
FOCAD-203ENST00000603044 PLEKHG5O94827 1062 aa19.62■□□□□ 0.73
FOCAD-203ENST00000603044 FARP1Q9Y4F1 1045 aaPredicted RBP19.59■□□□□ 0.73
FOCAD-203ENST00000603044 ZBTB47Q9UFB7 747 aaPredicted RBP19.54■□□□□ 0.72
FOCAD-203ENST00000603044 IFNLR1Q8IU57 520 aaPredicted RBP19.48■□□□□ 0.71
FOCAD-203ENST00000603044 NPM1P06748 294 aaKnown RBP eCLIP19.46■□□□□ 0.71
FOCAD-203ENST00000603044 C19orf67A6NJJ6 358 aa19.35■□□□□ 0.69
FOCAD-203ENST00000603044 KLHL34Q8N239 644 aa19.32■□□□□ 0.68
FOCAD-203ENST00000603044 NUBP1P53384 320 aa19.31■□□□□ 0.68
FOCAD-203ENST00000603044 SPOCK2Q92563 424 aa19.27■□□□□ 0.68
FOCAD-203ENST00000603044 HAX1O00165 279 aa19.22■□□□□ 0.67
FOCAD-203ENST00000603044 CD44P16070 742 aaKnown RBP19.2■□□□□ 0.66
FOCAD-203ENST00000603044 RASEFQ8IZ41 740 aa19.2■□□□□ 0.66
FOCAD-203ENST00000603044 PAK3O75914 559 aaPredicted RBP19.11■□□□□ 0.65
FOCAD-203ENST00000603044 EVX2Q03828 476 aa19.11■□□□□ 0.65
FOCAD-203ENST00000603044 FAM212AQ96EL1 285 aa19.1■□□□□ 0.65
FOCAD-203ENST00000603044 ZNF579Q8NAF0 562 aaKnown RBP19.05■□□□□ 0.64
FOCAD-203ENST00000603044 ZRANB1Q9UGI0 708 aa19.05■□□□□ 0.64
FOCAD-203ENST00000603044 GSE1Q14687 1217 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms