RNA–Protein interactions for RNA: ENST00000603012.1

AP001972.3-202, humanhuman

TSL 3 BASIC

Gene AP001972.3, Length 375 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001972.3-202ENST00000603012 AEBP2Q6ZN18 517 aaPredicted RBP17.88■□□□□ 0.45
AP001972.3-202ENST00000603012 CHIC1Q5VXU3 224 aa17.28■□□□□ 0.36
AP001972.3-202ENST00000603012 SENP3Q9H4L4 574 aaPredicted RBP15.27■□□□□ 0.04
AP001972.3-202ENST00000603012 PHF23Q9BUL5 403 aaPredicted RBP15.16■□□□□ 0.02
AP001972.3-202ENST00000603012 FOXD1Q16676 465 aa14.17□□□□□ -0.14
AP001972.3-202ENST00000603012 PLPPR3Q6T4P5 718 aa13.96□□□□□ -0.17
AP001972.3-202ENST00000603012 PPP6R1Q9UPN7 881 aa13.45□□□□□ -0.26
AP001972.3-202ENST00000603012 ADRA2BP18089 450 aa13.43□□□□□ -0.26
AP001972.3-202ENST00000603012 PIAS4Q8N2W9 510 aaPredicted RBP13.33□□□□□ -0.28
AP001972.3-202ENST00000603012 MSH5O43196 834 aa13.19□□□□□ -0.3
AP001972.3-202ENST00000603012 POTEDQ86YR6 584 aa12.38□□□□□ -0.43
AP001972.3-202ENST00000603012 SCAF1Q9H7N4 1312 aaKnown RBP12.35□□□□□ -0.43
AP001972.3-202ENST00000603012 PPP4R3CPQ6ZMV5 832 aa12.26□□□□□ -0.45
AP001972.3-202ENST00000603012 MAPK8IP2Q13387 824 aaPredicted RBP12.25□□□□□ -0.45
AP001972.3-202ENST00000603012 DMRT2Q9Y5R5 561 aa12.14□□□□□ -0.47
AP001972.3-202ENST00000603012 CNKSR2Q8WXI2 1034 aa11.98□□□□□ -0.49
AP001972.3-202ENST00000603012 NCBP3Q53F19 620 aaKnown RBP11.91□□□□□ -0.5
AP001972.3-202ENST00000603012 HOXD11P31277 338 aaPredicted RBP11.79□□□□□ -0.52
AP001972.3-202ENST00000603012 RNF216Q9NWF9 866 aaPredicted RBP11.79□□□□□ -0.52
AP001972.3-202ENST00000603012 KCNA4P22459 653 aa11.71□□□□□ -0.53
AP001972.3-202ENST00000603012 NPM3O75607 178 aaKnown RBP11.69□□□□□ -0.54
AP001972.3-202ENST00000603012 DCAF8L1A6NGE4 600 aa11.65□□□□□ -0.54
AP001972.3-202ENST00000603012 DNAJC5BQ9UF47 199 aa11.38□□□□□ -0.59
AP001972.3-202ENST00000603012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.27□□□□□ -0.61
AP001972.3-202ENST00000603012 RNF39Q9H2S5 420 aa11.25□□□□□ -0.61
AP001972.3-202ENST00000603012 CACNB1Q02641 598 aaPredicted RBP11.15□□□□□ -0.62
AP001972.3-202ENST00000603012 C1QBPQ07021 282 aaKnown RBP11.13□□□□□ -0.63
AP001972.3-202ENST00000603012 SLC4A1APQ9BWU0 796 aaKnown RBP11.13□□□□□ -0.63
AP001972.3-202ENST00000603012 SLC4A2P04920 1241 aa11.08□□□□□ -0.64
AP001972.3-202ENST00000603012 U3KPZ7 1027 aaPredicted RBP11.02□□□□□ -0.65
AP001972.3-202ENST00000603012 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.86□□□□□ -0.67
AP001972.3-202ENST00000603012 HNRNPUL2Q1KMD3 747 aaKnown RBP10.86□□□□□ -0.67
AP001972.3-202ENST00000603012 FOXD4L1Q9NU39 408 aa10.85□□□□□ -0.67
AP001972.3-202ENST00000603012 MYCNP04198 464 aaPredicted RBP10.83□□□□□ -0.68
AP001972.3-202ENST00000603012 APLP2Q06481 763 aa10.81□□□□□ -0.68
AP001972.3-202ENST00000603012 SAMD1Q6SPF0 538 aaPredicted RBP10.8□□□□□ -0.68
AP001972.3-202ENST00000603012 CAPN15O75808 1086 aa10.78□□□□□ -0.68
AP001972.3-202ENST00000603012 SPINK5Q9NQ38 1064 aaPredicted RBP10.78□□□□□ -0.68
AP001972.3-202ENST00000603012 ZBTB22O15209 634 aa10.74□□□□□ -0.69
AP001972.3-202ENST00000603012 TRHP20396 242 aaPredicted RBP10.67□□□□□ -0.7
AP001972.3-202ENST00000603012 ZNF219Q9P2Y4 722 aaPredicted RBP10.67□□□□□ -0.7
AP001972.3-202ENST00000603012 DSG3P32926 999 aa10.63□□□□□ -0.71
AP001972.3-202ENST00000603012 EHMT2Q96KQ7 1210 aa10.55□□□□□ -0.72
AP001972.3-202ENST00000603012 ABCB7O75027 752 aa10.54□□□□□ -0.72
AP001972.3-202ENST00000603012 CSRNP3Q8WYN3 585 aa10.52□□□□□ -0.73
AP001972.3-202ENST00000603012 ATF5Q9Y2D1 282 aaPredicted RBP10.52□□□□□ -0.73
AP001972.3-202ENST00000603012 ATXN8OSP0DMR3 200 aa10.51□□□□□ -0.73
AP001972.3-202ENST00000603012 POLA2Q14181 598 aa10.45□□□□□ -0.74
AP001972.3-202ENST00000603012 ZBTB12Q9Y330 459 aaPredicted RBP10.28□□□□□ -0.76
AP001972.3-202ENST00000603012 RBM42Q9BTD8 480 aaKnown RBP10.17□□□□□ -0.78
AP001972.3-202ENST00000603012 FBLN2P98095 1184 aa10.15□□□□□ -0.78
AP001972.3-202ENST00000603012 OSCARQ8IYS5 282 aa10.08□□□□□ -0.8
AP001972.3-202ENST00000603012 MKRN4PQ13434 485 aaPredicted RBP10.05□□□□□ -0.8
AP001972.3-202ENST00000603012 AKT1S1Q96B36 256 aa9.99□□□□□ -0.81
AP001972.3-202ENST00000603012 SPDYE2BA6NHP3 402 aa9.97□□□□□ -0.81
AP001972.3-202ENST00000603012 SPDYE6P0CI01 402 aa9.97□□□□□ -0.81
AP001972.3-202ENST00000603012 SPDYE2Q495Y8 402 aa9.97□□□□□ -0.81
AP001972.3-202ENST00000603012 ZNF692Q9BU19 519 aaPredicted RBP9.9□□□□□ -0.82
AP001972.3-202ENST00000603012 REM2Q8IYK8 340 aaPredicted RBP9.88□□□□□ -0.83
AP001972.3-202ENST00000603012 SSUH2Q9Y2M2 353 aa9.84□□□□□ -0.83
AP001972.3-202ENST00000603012 CHRDL2Q6WN34 429 aa9.82□□□□□ -0.84
AP001972.3-202ENST00000603012 PITPNM1O00562 1244 aa9.76□□□□□ -0.85
AP001972.3-202ENST00000603012 POTEHQ6S545 545 aa9.76□□□□□ -0.85
AP001972.3-202ENST00000603012 SPDYE4A6NLX3 237 aa9.75□□□□□ -0.85
AP001972.3-202ENST00000603012 PABPN1Q86U42 306 aaKnown RBP eCLIP9.75□□□□□ -0.85
AP001972.3-202ENST00000603012 SPDYE1Q8NFV5 336 aaPredicted RBP9.74□□□□□ -0.85
AP001972.3-202ENST00000603012 CLEC11AQ9Y240 323 aa9.71□□□□□ -0.86
AP001972.3-202ENST00000603012 FXR2P51116 673 aaKnown RBP eCLIP9.63□□□□□ -0.87
AP001972.3-202ENST00000603012 PIP4P2Q8N4L2 257 aa9.63□□□□□ -0.87
AP001972.3-202ENST00000603012 PRR29P0C7W0 189 aa9.59□□□□□ -0.87
AP001972.3-202ENST00000603012 STAG3Q9UJ98 1225 aa9.57□□□□□ -0.88
AP001972.3-202ENST00000603012 FKBP8Q14318 412 aa9.54□□□□□ -0.88
AP001972.3-202ENST00000603012 PRKAR2AP13861 404 aaKnown RBP9.53□□□□□ -0.88
AP001972.3-202ENST00000603012 PROM2Q8N271 834 aa9.53□□□□□ -0.88
AP001972.3-202ENST00000603012 CHADLQ6NUI6 762 aa9.46□□□□□ -0.9
AP001972.3-202ENST00000603012 HAX1O00165 279 aa9.41□□□□□ -0.9
AP001972.3-202ENST00000603012 CREBZFQ9NS37 354 aa9.38□□□□□ -0.91
AP001972.3-202ENST00000603012 FARP1Q9Y4F1 1045 aaPredicted RBP9.37□□□□□ -0.91
AP001972.3-202ENST00000603012 C19orf67A6NJJ6 358 aa9.31□□□□□ -0.92
AP001972.3-202ENST00000603012 PLEKHG5O94827 1062 aa9.3□□□□□ -0.92
AP001972.3-202ENST00000603012 MIER1Q8N108 512 aa9.3□□□□□ -0.92
AP001972.3-202ENST00000603012 FBXO3Q9UK99 471 aa9.3□□□□□ -0.92
AP001972.3-202ENST00000603012 SP7Q8TDD2 431 aaPredicted RBP9.28□□□□□ -0.92
AP001972.3-202ENST00000603012 EVX2Q03828 476 aa9.27□□□□□ -0.93
AP001972.3-202ENST00000603012 NPM1P06748 294 aaKnown RBP eCLIP9.26□□□□□ -0.93
AP001972.3-202ENST00000603012 MNX1P50219 401 aaPredicted RBP9.25□□□□□ -0.93
AP001972.3-202ENST00000603012 PLCD3Q8N3E9 789 aa9.25□□□□□ -0.93
AP001972.3-202ENST00000603012 CD44P16070 742 aaKnown RBP9.24□□□□□ -0.93
AP001972.3-202ENST00000603012 ZBTB47Q9UFB7 747 aaPredicted RBP9.18□□□□□ -0.94
AP001972.3-202ENST00000603012 PAK3O75914 559 aaPredicted RBP9.17□□□□□ -0.94
AP001972.3-202ENST00000603012 ZRANB1Q9UGI0 708 aa9.16□□□□□ -0.94
AP001972.3-202ENST00000603012 VASPP50552 380 aaPredicted RBP9.14□□□□□ -0.95
AP001972.3-202ENST00000603012 GABBR2O75899 941 aa9.1□□□□□ -0.95
AP001972.3-202ENST00000603012 CLCN6P51797 869 aa9.1□□□□□ -0.95
AP001972.3-202ENST00000603012 ZNF579Q8NAF0 562 aaKnown RBP9.1□□□□□ -0.95
AP001972.3-202ENST00000603012 TSPYL2Q9H2G4 693 aaPredicted RBP9.08□□□□□ -0.96
AP001972.3-202ENST00000603012 KLHL34Q8N239 644 aa9.07□□□□□ -0.96
AP001972.3-202ENST00000603012 RASEFQ8IZ41 740 aa9.06□□□□□ -0.96
AP001972.3-202ENST00000603012 NUBP1P53384 320 aa9.04□□□□□ -0.96
AP001972.3-202ENST00000603012 PHF12Q96QT6 1004 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms