RNA–Protein interactions for RNA: ENST00000602632.1

UBE2E3-208, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 2 BASIC

Gene UBE2E3, Length 446 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-208ENST00000602632 AEBP2Q6ZN18 517 aaPredicted RBP30.84■■■□□ 2.53
UBE2E3-208ENST00000602632 CHIC1Q5VXU3 224 aa29.07■■■□□ 2.24
UBE2E3-208ENST00000602632 SENP3Q9H4L4 574 aaPredicted RBP26.72■■□□□ 1.87
UBE2E3-208ENST00000602632 PHF23Q9BUL5 403 aaPredicted RBP26.08■■□□□ 1.77
UBE2E3-208ENST00000602632 FOXD1Q16676 465 aa24.83■■□□□ 1.57
UBE2E3-208ENST00000602632 POTEDQ86YR6 584 aa24.74■■□□□ 1.55
UBE2E3-208ENST00000602632 MSH5O43196 834 aa23.84■■□□□ 1.41
UBE2E3-208ENST00000602632 PIAS4Q8N2W9 510 aaPredicted RBP23.05■■□□□ 1.28
UBE2E3-208ENST00000602632 PLPPR3Q6T4P5 718 aa22.41■■□□□ 1.18
UBE2E3-208ENST00000602632 PPP6R1Q9UPN7 881 aa22.37■■□□□ 1.17
UBE2E3-208ENST00000602632 ADRA2BP18089 450 aa22.27■■□□□ 1.16
UBE2E3-208ENST00000602632 DMRT2Q9Y5R5 561 aa20.98■□□□□ 0.95
UBE2E3-208ENST00000602632 CACNB1Q02641 598 aaPredicted RBP20.94■□□□□ 0.94
UBE2E3-208ENST00000602632 MAPK8IP2Q13387 824 aaPredicted RBP20.7■□□□□ 0.9
UBE2E3-208ENST00000602632 SCAF1Q9H7N4 1312 aaKnown RBP20.68■□□□□ 0.9
UBE2E3-208ENST00000602632 RNF39Q9H2S5 420 aa20.14■□□□□ 0.81
UBE2E3-208ENST00000602632 DCAF8L1A6NGE4 600 aa20.1■□□□□ 0.81
UBE2E3-208ENST00000602632 C1QBPQ07021 282 aaKnown RBP19.89■□□□□ 0.77
UBE2E3-208ENST00000602632 HOXD11P31277 338 aaPredicted RBP19.83■□□□□ 0.77
UBE2E3-208ENST00000602632 DNAJC5BQ9UF47 199 aa19.52■□□□□ 0.72
UBE2E3-208ENST00000602632 RNF216Q9NWF9 866 aaPredicted RBP19.45■□□□□ 0.7
UBE2E3-208ENST00000602632 PPP4R3CPQ6ZMV5 832 aa19.41■□□□□ 0.7
UBE2E3-208ENST00000602632 CNKSR2Q8WXI2 1034 aa19.37■□□□□ 0.69
UBE2E3-208ENST00000602632 POTEHQ6S545 545 aa19.24■□□□□ 0.67
UBE2E3-208ENST00000602632 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.88■□□□□ 0.61
UBE2E3-208ENST00000602632 NCBP3Q53F19 620 aaKnown RBP18.53■□□□□ 0.56
UBE2E3-208ENST00000602632 DSG3P32926 999 aa18.5■□□□□ 0.55
UBE2E3-208ENST00000602632 CAPN15O75808 1086 aa18.39■□□□□ 0.53
UBE2E3-208ENST00000602632 U3KPZ7 1027 aaPredicted RBP18.31■□□□□ 0.52
UBE2E3-208ENST00000602632 SPINK5Q9NQ38 1064 aaPredicted RBP18.27■□□□□ 0.52
UBE2E3-208ENST00000602632 NPM3O75607 178 aaKnown RBP18.09■□□□□ 0.49
UBE2E3-208ENST00000602632 APLP2Q06481 763 aa18■□□□□ 0.47
UBE2E3-208ENST00000602632 ZNF219Q9P2Y4 722 aaPredicted RBP17.92■□□□□ 0.46
UBE2E3-208ENST00000602632 RBM42Q9BTD8 480 aaKnown RBP17.87■□□□□ 0.45
UBE2E3-208ENST00000602632 TRHP20396 242 aaPredicted RBP17.81■□□□□ 0.44
UBE2E3-208ENST00000602632 ABCB7O75027 752 aa17.78■□□□□ 0.44
UBE2E3-208ENST00000602632 CHRDL2Q6WN34 429 aa17.72■□□□□ 0.43
UBE2E3-208ENST00000602632 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.7■□□□□ 0.42
UBE2E3-208ENST00000602632 HNRNPUL2Q1KMD3 747 aaKnown RBP17.7■□□□□ 0.42
UBE2E3-208ENST00000602632 SP7Q8TDD2 431 aaPredicted RBP17.61■□□□□ 0.41
UBE2E3-208ENST00000602632 SAMD1Q6SPF0 538 aaPredicted RBP17.48■□□□□ 0.39
UBE2E3-208ENST00000602632 SLC4A2P04920 1241 aa17.47■□□□□ 0.39
UBE2E3-208ENST00000602632 AKT1S1Q96B36 256 aa17.17■□□□□ 0.34
UBE2E3-208ENST00000602632 POLA2Q14181 598 aa17.13■□□□□ 0.33
UBE2E3-208ENST00000602632 PIP4P2Q8N4L2 257 aa17.03■□□□□ 0.32
UBE2E3-208ENST00000602632 HAX1O00165 279 aa17.02■□□□□ 0.32
UBE2E3-208ENST00000602632 ZBTB12Q9Y330 459 aaPredicted RBP16.94■□□□□ 0.3
UBE2E3-208ENST00000602632 REM2Q8IYK8 340 aaPredicted RBP16.92■□□□□ 0.3
UBE2E3-208ENST00000602632 MYCNP04198 464 aaPredicted RBP16.87■□□□□ 0.29
UBE2E3-208ENST00000602632 FXR2P51116 673 aaKnown RBP eCLIP16.83■□□□□ 0.28
UBE2E3-208ENST00000602632 KCNA4P22459 653 aa16.8■□□□□ 0.28
UBE2E3-208ENST00000602632 PITPNM1O00562 1244 aa16.73■□□□□ 0.27
UBE2E3-208ENST00000602632 OSCARQ8IYS5 282 aa16.61■□□□□ 0.25
UBE2E3-208ENST00000602632 EVX2Q03828 476 aa16.56■□□□□ 0.24
UBE2E3-208ENST00000602632 LHX8Q68G74 356 aa16.48■□□□□ 0.23
UBE2E3-208ENST00000602632 C19orf67A6NJJ6 358 aa16.32■□□□□ 0.2
UBE2E3-208ENST00000602632 PRKAR2AP13861 404 aaKnown RBP16.31■□□□□ 0.2
UBE2E3-208ENST00000602632 ATF5Q9Y2D1 282 aaPredicted RBP16.31■□□□□ 0.2
UBE2E3-208ENST00000602632 GABBR2O75899 941 aa16.28■□□□□ 0.2
UBE2E3-208ENST00000602632 SPDYE2BA6NHP3 402 aa16.24■□□□□ 0.19
UBE2E3-208ENST00000602632 SPDYE6P0CI01 402 aa16.24■□□□□ 0.19
UBE2E3-208ENST00000602632 SPDYE2Q495Y8 402 aa16.24■□□□□ 0.19
UBE2E3-208ENST00000602632 SPDYE1Q8NFV5 336 aaPredicted RBP16.2■□□□□ 0.18
UBE2E3-208ENST00000602632 PLSCR2Q9NRY7 297 aa16.19■□□□□ 0.18
UBE2E3-208ENST00000602632 FOXD4L1Q9NU39 408 aa16.13■□□□□ 0.17
UBE2E3-208ENST00000602632 CLEC11AQ9Y240 323 aa16.09■□□□□ 0.17
UBE2E3-208ENST00000602632 FBLN2P98095 1184 aa16.02■□□□□ 0.16
UBE2E3-208ENST00000602632 CLCN6P51797 869 aa15.99■□□□□ 0.15
UBE2E3-208ENST00000602632 POTEIP0CG38 1075 aa15.84■□□□□ 0.13
UBE2E3-208ENST00000602632 ATXN8OSP0DMR3 200 aa15.84■□□□□ 0.13
UBE2E3-208ENST00000602632 SSUH2Q9Y2M2 353 aa15.84■□□□□ 0.13
UBE2E3-208ENST00000602632 CHADLQ6NUI6 762 aa15.81■□□□□ 0.12
UBE2E3-208ENST00000602632 ZNF692Q9BU19 519 aaPredicted RBP15.81■□□□□ 0.12
UBE2E3-208ENST00000602632 SLC4A1APQ9BWU0 796 aaKnown RBP15.76■□□□□ 0.11
UBE2E3-208ENST00000602632 PRR29P0C7W0 189 aa15.75■□□□□ 0.11
UBE2E3-208ENST00000602632 CD44P16070 742 aaKnown RBP15.75■□□□□ 0.11
UBE2E3-208ENST00000602632 DCBLD2Q96PD2 775 aa15.72■□□□□ 0.11
UBE2E3-208ENST00000602632 FARP1Q9Y4F1 1045 aaPredicted RBP15.59■□□□□ 0.09
UBE2E3-208ENST00000602632 PCDH10Q9P2E7 1040 aa15.57■□□□□ 0.08
UBE2E3-208ENST00000602632 MKRN4PQ13434 485 aaPredicted RBP15.56■□□□□ 0.08
UBE2E3-208ENST00000602632 POTEMA6NI47 508 aa15.55■□□□□ 0.08
UBE2E3-208ENST00000602632 ZNF579Q8NAF0 562 aaKnown RBP15.51■□□□□ 0.07
UBE2E3-208ENST00000602632 PABPN1Q86U42 306 aaKnown RBP eCLIP15.5■□□□□ 0.07
UBE2E3-208ENST00000602632 OTUD5Q96G74 571 aa15.5■□□□□ 0.07
UBE2E3-208ENST00000602632 POTEGQ6S5H5 508 aa15.47■□□□□ 0.07
UBE2E3-208ENST00000602632 ZBTB22O15209 634 aa15.36■□□□□ 0.05
UBE2E3-208ENST00000602632 ZRANB1Q9UGI0 708 aa15.35■□□□□ 0.05
UBE2E3-208ENST00000602632 POTEB2H3BUK9 544 aa15.26■□□□□ 0.03
UBE2E3-208ENST00000602632 GALR2O43603 387 aaPredicted RBP15.26■□□□□ 0.03
UBE2E3-208ENST00000602632 PAK3O75914 559 aaPredicted RBP15.18■□□□□ 0.02
UBE2E3-208ENST00000602632 MAMSTRQ6ZN01 415 aa15.16■□□□□ 0.02
UBE2E3-208ENST00000602632 STAG3Q9UJ98 1225 aa15.06■□□□□ 0
UBE2E3-208ENST00000602632 CREBZFQ9NS37 354 aa15.05■□□□□ -0
UBE2E3-208ENST00000602632 SLC39A7Q92504 469 aa15.04■□□□□ -0
UBE2E3-208ENST00000602632 C7P10643 843 aa15.03■□□□□ -0
UBE2E3-208ENST00000602632 METRNQ9UJH8 293 aa15.03■□□□□ -0
UBE2E3-208ENST00000602632 PELP1Q8IZL8 1130 aaKnown RBP15□□□□□ -0.01
UBE2E3-208ENST00000602632 ASTLQ6HA08 431 aaPredicted RBP14.99□□□□□ -0.01
UBE2E3-208ENST00000602632 PHF12Q96QT6 1004 aa14.98□□□□□ -0.01
UBE2E3-208ENST00000602632 SCUBE2Q9NQ36 999 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms