RNA–Protein interactions for RNA: ENST00000601905.1

AC073539.3-201, humanhuman

TSL 3 BASIC

Gene AC073539.3, Length 386 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC073539.3-201ENST00000601905 CHIC1Q5VXU3 224 aa23.33■■□□□ 1.33
AC073539.3-201ENST00000601905 AEBP2Q6ZN18 517 aaPredicted RBP23.28■■□□□ 1.32
AC073539.3-201ENST00000601905 PHF23Q9BUL5 403 aaPredicted RBP20.45■□□□□ 0.86
AC073539.3-201ENST00000601905 SENP3Q9H4L4 574 aaPredicted RBP19.9■□□□□ 0.78
AC073539.3-201ENST00000601905 PLPPR3Q6T4P5 718 aa19.22■□□□□ 0.67
AC073539.3-201ENST00000601905 FOXD1Q16676 465 aa18.27■□□□□ 0.52
AC073539.3-201ENST00000601905 ADRA2BP18089 450 aa17.89■□□□□ 0.45
AC073539.3-201ENST00000601905 PPP6R1Q9UPN7 881 aa17.86■□□□□ 0.45
AC073539.3-201ENST00000601905 POTEDQ86YR6 584 aa17.68■□□□□ 0.42
AC073539.3-201ENST00000601905 PIAS4Q8N2W9 510 aaPredicted RBP17.4■□□□□ 0.38
AC073539.3-201ENST00000601905 MSH5O43196 834 aa16.95■□□□□ 0.3
AC073539.3-201ENST00000601905 KCNA4P22459 653 aa16.95■□□□□ 0.3
AC073539.3-201ENST00000601905 PPP4R3CPQ6ZMV5 832 aa16.91■□□□□ 0.3
AC073539.3-201ENST00000601905 NCBP3Q53F19 620 aaKnown RBP16.75■□□□□ 0.27
AC073539.3-201ENST00000601905 SCAF1Q9H7N4 1312 aaKnown RBP16.64■□□□□ 0.25
AC073539.3-201ENST00000601905 CNKSR2Q8WXI2 1034 aa16.42■□□□□ 0.22
AC073539.3-201ENST00000601905 NISCHQ9Y2I1 1504 aa16.4■□□□□ 0.22
AC073539.3-201ENST00000601905 NPM3O75607 178 aaKnown RBP16.33■□□□□ 0.2
AC073539.3-201ENST00000601905 SLC4A1APQ9BWU0 796 aaKnown RBP16.31■□□□□ 0.2
AC073539.3-201ENST00000601905 EHMT2Q96KQ7 1210 aa16.26■□□□□ 0.19
AC073539.3-201ENST00000601905 MAPK8IP2Q13387 824 aaPredicted RBP16.05■□□□□ 0.16
AC073539.3-201ENST00000601905 RNF216Q9NWF9 866 aaPredicted RBP15.99■□□□□ 0.15
AC073539.3-201ENST00000601905 DNAJC5BQ9UF47 199 aa15.98■□□□□ 0.15
AC073539.3-201ENST00000601905 DMRT2Q9Y5R5 561 aa15.91■□□□□ 0.14
AC073539.3-201ENST00000601905 CSRNP3Q8WYN3 585 aa15.89■□□□□ 0.13
AC073539.3-201ENST00000601905 HOXD11P31277 338 aaPredicted RBP15.77■□□□□ 0.12
AC073539.3-201ENST00000601905 FOXD4L1Q9NU39 408 aa15.59■□□□□ 0.09
AC073539.3-201ENST00000601905 ZBTB22O15209 634 aa15.54■□□□□ 0.08
AC073539.3-201ENST00000601905 SLC4A2P04920 1241 aa15.26■□□□□ 0.03
AC073539.3-201ENST00000601905 MYCNP04198 464 aaPredicted RBP15.19■□□□□ 0.02
AC073539.3-201ENST00000601905 DCAF8L1A6NGE4 600 aa15.14■□□□□ 0.01
AC073539.3-201ENST00000601905 ATXN8OSP0DMR3 200 aa15.11■□□□□ 0.01
AC073539.3-201ENST00000601905 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.03■□□□□ -0
AC073539.3-201ENST00000601905 CACNB1Q02641 598 aaPredicted RBP14.98□□□□□ -0.01
AC073539.3-201ENST00000601905 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.96□□□□□ -0.01
AC073539.3-201ENST00000601905 HNRNPUL2Q1KMD3 747 aaKnown RBP14.96□□□□□ -0.01
AC073539.3-201ENST00000601905 SAMD1Q6SPF0 538 aaPredicted RBP14.87□□□□□ -0.03
AC073539.3-201ENST00000601905 U3KPZ7 1027 aaPredicted RBP14.76□□□□□ -0.05
AC073539.3-201ENST00000601905 APLP2Q06481 763 aa14.74□□□□□ -0.05
AC073539.3-201ENST00000601905 ATF5Q9Y2D1 282 aaPredicted RBP14.53□□□□□ -0.08
AC073539.3-201ENST00000601905 CCDC180Q9P1Z9 1646 aa14.45□□□□□ -0.1
AC073539.3-201ENST00000601905 ZNF219Q9P2Y4 722 aaPredicted RBP14.4□□□□□ -0.1
AC073539.3-201ENST00000601905 RNF39Q9H2S5 420 aa14.39□□□□□ -0.11
AC073539.3-201ENST00000601905 FKBP8Q14318 412 aa14.36□□□□□ -0.11
AC073539.3-201ENST00000601905 C1QBPQ07021 282 aaKnown RBP14.34□□□□□ -0.11
AC073539.3-201ENST00000601905 CAPN15O75808 1086 aa14.18□□□□□ -0.14
AC073539.3-201ENST00000601905 TRHP20396 242 aaPredicted RBP14.18□□□□□ -0.14
AC073539.3-201ENST00000601905 SPINK5Q9NQ38 1064 aaPredicted RBP14.16□□□□□ -0.14
AC073539.3-201ENST00000601905 FBLN2P98095 1184 aa14.14□□□□□ -0.15
AC073539.3-201ENST00000601905 POLA2Q14181 598 aa14.08□□□□□ -0.16
AC073539.3-201ENST00000601905 ZBTB12Q9Y330 459 aaPredicted RBP14.08□□□□□ -0.16
AC073539.3-201ENST00000601905 AMER1Q5JTC6 1135 aaPredicted RBP14.02□□□□□ -0.17
AC073539.3-201ENST00000601905 SPDYE4A6NLX3 237 aa13.98□□□□□ -0.17
AC073539.3-201ENST00000601905 MKRN4PQ13434 485 aaPredicted RBP13.97□□□□□ -0.17
AC073539.3-201ENST00000601905 FBXO3Q9UK99 471 aa13.92□□□□□ -0.18
AC073539.3-201ENST00000601905 ABCB7O75027 752 aa13.87□□□□□ -0.19
AC073539.3-201ENST00000601905 PROM2Q8N271 834 aa13.83□□□□□ -0.2
AC073539.3-201ENST00000601905 DSG3P32926 999 aa13.82□□□□□ -0.2
AC073539.3-201ENST00000601905 RTN4Q9NQC3 1192 aaKnown RBP13.79□□□□□ -0.2
AC073539.3-201ENST00000601905 ABCC9O60706 1549 aa13.79□□□□□ -0.2
AC073539.3-201ENST00000601905 POTEHQ6S545 545 aa13.75□□□□□ -0.21
AC073539.3-201ENST00000601905 ZCCHC6Q5VYS8 1495 aaKnown RBP13.74□□□□□ -0.21
AC073539.3-201ENST00000601905 SPDYE2BA6NHP3 402 aa13.65□□□□□ -0.22
AC073539.3-201ENST00000601905 SPDYE6P0CI01 402 aa13.65□□□□□ -0.22
AC073539.3-201ENST00000601905 SPDYE2Q495Y8 402 aa13.65□□□□□ -0.22
AC073539.3-201ENST00000601905 DCAF1Q9Y4B6 1507 aa13.64□□□□□ -0.23
AC073539.3-201ENST00000601905 ZNF692Q9BU19 519 aaPredicted RBP13.6□□□□□ -0.23
AC073539.3-201ENST00000601905 MYO15BQ96JP2 1530 aa13.59□□□□□ -0.23
AC073539.3-201ENST00000601905 VASPP50552 380 aaPredicted RBP13.59□□□□□ -0.23
AC073539.3-201ENST00000601905 OSCARQ8IYS5 282 aa13.54□□□□□ -0.24
AC073539.3-201ENST00000601905 SSUH2Q9Y2M2 353 aa13.53□□□□□ -0.24
AC073539.3-201ENST00000601905 NACADO15069 1562 aa13.5□□□□□ -0.25
AC073539.3-201ENST00000601905 STAG3Q9UJ98 1225 aa13.5□□□□□ -0.25
AC073539.3-201ENST00000601905 RB1CC1Q8TDY2 1594 aa13.43□□□□□ -0.26
AC073539.3-201ENST00000601905 PABPN1Q86U42 306 aaKnown RBP eCLIP13.4□□□□□ -0.26
AC073539.3-201ENST00000601905 DCAF8L2P0C7V8 631 aa13.37□□□□□ -0.27
AC073539.3-201ENST00000601905 IFNLR1Q8IU57 520 aaPredicted RBP13.37□□□□□ -0.27
AC073539.3-201ENST00000601905 RBM42Q9BTD8 480 aaKnown RBP13.32□□□□□ -0.28
AC073539.3-201ENST00000601905 SLC24A1O60721 1099 aa13.3□□□□□ -0.28
AC073539.3-201ENST00000601905 PLEKHG5O94827 1062 aa13.28□□□□□ -0.28
AC073539.3-201ENST00000601905 PLCD3Q8N3E9 789 aa13.27□□□□□ -0.29
AC073539.3-201ENST00000601905 KLHL34Q8N239 644 aa13.26□□□□□ -0.29
AC073539.3-201ENST00000601905 SPOCK2Q92563 424 aa13.24□□□□□ -0.29
AC073539.3-201ENST00000601905 ZBTB47Q9UFB7 747 aaPredicted RBP13.24□□□□□ -0.29
AC073539.3-201ENST00000601905 MIER1Q8N108 512 aa13.22□□□□□ -0.29
AC073539.3-201ENST00000601905 AKT1S1Q96B36 256 aa13.19□□□□□ -0.3
AC073539.3-201ENST00000601905 SCRIBQ14160 1630 aa13.14□□□□□ -0.31
AC073539.3-201ENST00000601905 SPDYE1Q8NFV5 336 aaPredicted RBP13.14□□□□□ -0.31
AC073539.3-201ENST00000601905 UNC13AQ9UPW8 1703 aa13.1□□□□□ -0.31
AC073539.3-201ENST00000601905 PKD2Q13563 968 aa13.09□□□□□ -0.31
AC073539.3-201ENST00000601905 BICRAQ9NZM4 1560 aa13.07□□□□□ -0.32
AC073539.3-201ENST00000601905 ECM2O94769 699 aaPredicted RBP13□□□□□ -0.33
AC073539.3-201ENST00000601905 SHROOM4Q9ULL8 1493 aa12.99□□□□□ -0.33
AC073539.3-201ENST00000601905 REM2Q8IYK8 340 aaPredicted RBP12.98□□□□□ -0.33
AC073539.3-201ENST00000601905 TRIM41Q8WV44 630 aa12.98□□□□□ -0.33
AC073539.3-201ENST00000601905 PRR29P0C7W0 189 aa12.96□□□□□ -0.33
AC073539.3-201ENST00000601905 CLEC11AQ9Y240 323 aa12.95□□□□□ -0.34
AC073539.3-201ENST00000601905 GSE1Q14687 1217 aa12.9□□□□□ -0.34
AC073539.3-201ENST00000601905 CIZ1Q9ULV3 898 aaPredicted RBP12.9□□□□□ -0.34
AC073539.3-201ENST00000601905 PLCB2Q00722 1185 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 139.8 ms