RNA–Protein interactions for RNA: ENST00000601356.1

AP2A1-208, Transcript of adaptor related protein complex 2 subunit alpha 1, humanhuman

Gene AP2A1, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP2A1-208ENST00000601356 NISCHQ9Y2I1 1504 aa49.54■■■■■ 5.52
AP2A1-208ENST00000601356 CCDC180Q9P1Z9 1646 aa42.4■■■■■ 4.38
AP2A1-208ENST00000601356 ZCCHC6Q5VYS8 1495 aaKnown RBP41.85■■■■■ 4.29
AP2A1-208ENST00000601356 SHROOM4Q9ULL8 1493 aa41.84■■■■■ 4.29
AP2A1-208ENST00000601356 DCAF8L2P0C7V8 631 aa41■■■■■ 4.15
AP2A1-208ENST00000601356 SUPT5HO00267 1087 aaKnown RBP40.81■■■■■ 4.12
AP2A1-208ENST00000601356 DCAF1Q9Y4B6 1507 aa40.68■■■■■ 4.1
AP2A1-208ENST00000601356 MYO15BQ96JP2 1530 aa39.65■■■■□ 3.94
AP2A1-208ENST00000601356 SCRIBQ14160 1630 aa39.6■■■■□ 3.93
AP2A1-208ENST00000601356 CHIC1Q5VXU3 224 aa39.53■■■■□ 3.92
AP2A1-208ENST00000601356 ABCC9O60706 1549 aa39.47■■■■□ 3.91
AP2A1-208ENST00000601356 NACADO15069 1562 aa39.23■■■■□ 3.87
AP2A1-208ENST00000601356 RSF1Q96T23 1441 aaPredicted RBP39.02■■■■□ 3.84
AP2A1-208ENST00000601356 RB1CC1Q8TDY2 1594 aa38.66■■■■□ 3.78
AP2A1-208ENST00000601356 CECR2Q9BXF3 1484 aa38.65■■■■□ 3.78
AP2A1-208ENST00000601356 MROH2BQ7Z745 1585 aa38.49■■■■□ 3.75
AP2A1-208ENST00000601356 LOC105371045A0A1W2PR82 267 aa38.32■■■■□ 3.72
AP2A1-208ENST00000601356 WIZO95785 1651 aa38.3■■■■□ 3.72
AP2A1-208ENST00000601356 UNC13AQ9UPW8 1703 aa38.19■■■■□ 3.7
AP2A1-208ENST00000601356 BAZ1AQ9NRL2 1556 aaPredicted RBP38.08■■■■□ 3.69
AP2A1-208ENST00000601356 TRIM41Q8WV44 630 aa38.06■■■■□ 3.68
AP2A1-208ENST00000601356 PCGF6Q9BYE7 350 aa37.85■■■■□ 3.65
AP2A1-208ENST00000601356 SMARCA4P51532 1647 aa37.85■■■■□ 3.65
AP2A1-208ENST00000601356 FAM9AQ8IZU1 332 aaPredicted RBP37.71■■■■□ 3.63
AP2A1-208ENST00000601356 TOP2AP11388 1531 aaKnown RBP37.69■■■■□ 3.62
AP2A1-208ENST00000601356 EIF4G1Q04637 1599 aaKnown RBP37.66■■■■□ 3.62
AP2A1-208ENST00000601356 BICRAQ9NZM4 1560 aa37.66■■■■□ 3.62
AP2A1-208ENST00000601356 HRCP23327 699 aa37.61■■■■□ 3.61
AP2A1-208ENST00000601356 PABPN1Q86U42 306 aaKnown RBP eCLIP37.61■■■■□ 3.61
AP2A1-208ENST00000601356 CCDC88BA6NC98 1476 aa37.48■■■■□ 3.59
AP2A1-208ENST00000601356 SMARCA2P51531 1590 aa37.48■■■■□ 3.59
AP2A1-208ENST00000601356 EHMT2Q96KQ7 1210 aa37.37■■■■□ 3.57
AP2A1-208ENST00000601356 ABCC8Q09428 1581 aa37.27■■■■□ 3.56
AP2A1-208ENST00000601356 TRIM26Q12899 539 aaPredicted RBP37.25■■■■□ 3.55
AP2A1-208ENST00000601356 PEG3Q9GZU2 1588 aa37.15■■■■□ 3.54
AP2A1-208ENST00000601356 ATAD2BQ9ULI0 1458 aa36.92■■■■□ 3.5
AP2A1-208ENST00000601356 PPARGC1BQ86YN6 1023 aaKnown RBP36.9■■■■□ 3.5
AP2A1-208ENST00000601356 SOGA1O94964 1423 aa36.8■■■■□ 3.48
AP2A1-208ENST00000601356 BAZ1BQ9UIG0 1483 aaKnown RBP36.79■■■■□ 3.48
AP2A1-208ENST00000601356 RUSC2Q8N2Y8 1516 aa36.67■■■■□ 3.46
AP2A1-208ENST00000601356 WRNQ14191 1432 aaPredicted RBP eCLIP36.65■■■■□ 3.466e-6■□□□□ 9
AP2A1-208ENST00000601356 SYNJ1O43426 1573 aa36.56■■■■□ 3.44
AP2A1-208ENST00000601356 EEA1Q15075 1411 aa36.55■■■■□ 3.44
AP2A1-208ENST00000601356 CSRNP3Q8WYN3 585 aa36.51■■■■□ 3.43
AP2A1-208ENST00000601356 CEP162Q5TB80 1403 aa36.44■■■■□ 3.42
AP2A1-208ENST00000601356 TNIKQ9UKE5 1360 aa36.41■■■■□ 3.42
AP2A1-208ENST00000601356 GOLGA3Q08378 1498 aa36.29■■■■□ 3.4
AP2A1-208ENST00000601356 UBTFP17480 764 aaKnown RBP36.29■■■■□ 3.4
AP2A1-208ENST00000601356 HMGXB3Q12766 1538 aa36.27■■■■□ 3.4
AP2A1-208ENST00000601356 NCAPD3P42695 1498 aa36.27■■■■□ 3.4
AP2A1-208ENST00000601356 ZEB1P37275 1124 aaPredicted RBP36.22■■■■□ 3.39
AP2A1-208ENST00000601356 KIF21BO75037 1637 aa36.15■■■■□ 3.38
AP2A1-208ENST00000601356 TOP2BQ02880 1626 aa36.14■■■■□ 3.38
AP2A1-208ENST00000601356 CEP164Q9UPV0 1460 aa36.13■■■■□ 3.37
AP2A1-208ENST00000601356 TTBK1Q5TCY1 1321 aaPredicted RBP36.07■■■■□ 3.37
AP2A1-208ENST00000601356 BIVM-ERCC5R4GMW8 1640 aa36.05■■■■□ 3.36
AP2A1-208ENST00000601356 RAPGEF2Q9Y4G8 1499 aa35.94■■■■□ 3.34
AP2A1-208ENST00000601356 CFTRP13569 1480 aa35.87■■■■□ 3.33
AP2A1-208ENST00000601356 CUX1P39880 1505 aa35.87■■■■□ 3.33
AP2A1-208ENST00000601356 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.85■■■■□ 3.33
AP2A1-208ENST00000601356 CLIP1P30622 1438 aa35.84■■■■□ 3.33
AP2A1-208ENST00000601356 CCER1Q8TC90 406 aaPredicted RBP35.71■■■■□ 3.31
AP2A1-208ENST00000601356 PRDM2Q13029 1718 aa35.7■■■■□ 3.3
AP2A1-208ENST00000601356 RANGAP1P46060 587 aaPredicted RBP35.66■■■■□ 3.3
AP2A1-208ENST00000601356 VPS8Q8N3P4 1428 aa35.65■■■■□ 3.3
AP2A1-208ENST00000601356 PRXQ9BXM0 1461 aa35.64■■■■□ 3.3
AP2A1-208ENST00000601356 ERICH3Q5RHP9 1530 aa35.62■■■■□ 3.29
AP2A1-208ENST00000601356 CC2D2AQ9P2K1 1620 aa35.6■■■■□ 3.29
AP2A1-208ENST00000601356 KIF27Q86VH2 1401 aa35.55■■■■□ 3.28
AP2A1-208ENST00000601356 CADPSQ9ULU8 1353 aa35.52■■■■□ 3.28
AP2A1-208ENST00000601356 APLP2Q06481 763 aa35.37■■■■□ 3.25
AP2A1-208ENST00000601356 ARAP1Q96P48 1450 aa35.37■■■■□ 3.25
AP2A1-208ENST00000601356 CUX2O14529 1486 aa35.3■■■■□ 3.24
AP2A1-208ENST00000601356 FGD5Q6ZNL6 1462 aa35.28■■■■□ 3.24
AP2A1-208ENST00000601356 HNRNPUL2Q1KMD3 747 aaKnown RBP35.26■■■■□ 3.23
AP2A1-208ENST00000601356 FANCD2Q9BXW9 1451 aa35.2■■■■□ 3.23
AP2A1-208ENST00000601356 IGF1RP08069 1367 aa35.2■■■■□ 3.23
AP2A1-208ENST00000601356 ARHGAP35Q9NRY4 1499 aa35.12■■■■□ 3.21
AP2A1-208ENST00000601356 NESP48681 1621 aa35.09■■■■□ 3.21
AP2A1-208ENST00000601356 KANK4Q5T7N3 995 aaPredicted RBP35.06■■■■□ 3.2
AP2A1-208ENST00000601356 CARMIL1Q5VZK9 1371 aa35.03■■■■□ 3.2
AP2A1-208ENST00000601356 DNMBPQ6XZF7 1577 aa35.01■■■■□ 3.2
AP2A1-208ENST00000601356 RAD54L2Q9Y4B4 1467 aa34.95■■■■□ 3.19
AP2A1-208ENST00000601356 TOPBP1Q92547 1522 aa34.95■■■■□ 3.19
AP2A1-208ENST00000601356 POLA1P09884 1462 aaPredicted RBP34.91■■■■□ 3.18
AP2A1-208ENST00000601356 ABCA10Q8WWZ4 1543 aa34.85■■■■□ 3.17
AP2A1-208ENST00000601356 LAMC3Q9Y6N6 1575 aa34.81■■■■□ 3.16
AP2A1-208ENST00000601356 DIEXFQ68CQ4 756 aaKnown RBP34.77■■■■□ 3.16
AP2A1-208ENST00000601356 RRBP1Q9P2E9 1410 aaKnown RBP34.76■■■■□ 3.16
AP2A1-208ENST00000601356 URB2Q14146 1524 aaKnown RBP34.74■■■■□ 3.15
AP2A1-208ENST00000601356 DNAJC5BQ9UF47 199 aa34.74■■■■□ 3.15
AP2A1-208ENST00000601356 TIAM1Q13009 1591 aa34.69■■■■□ 3.14
AP2A1-208ENST00000601356 WDR97A6NE52 1622 aa34.66■■■■□ 3.14
AP2A1-208ENST00000601356 ZNF316A6NFI3 1004 aaPredicted RBP34.65■■■■□ 3.14
AP2A1-208ENST00000601356 CUL7Q14999 1698 aa34.65■■■■□ 3.14
AP2A1-208ENST00000601356 P3H3Q8IVL6 736 aa34.62■■■■□ 3.13
AP2A1-208ENST00000601356 CCNB3Q8WWL7 1395 aa34.62■■■■□ 3.13
AP2A1-208ENST00000601356 MAP3K1Q13233 1512 aa34.61■■■■□ 3.13
AP2A1-208ENST00000601356 DHX57Q6P158 1386 aaKnown RBP34.58■■■■□ 3.13
AP2A1-208ENST00000601356 PCF11O94913 1555 aaKnown RBP34.57■■■■□ 3.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms