RNA–Protein interactions for RNA: ENST00000600426.5

PPFIA4-211, Transcript of PTPRF interacting protein alpha 4, humanhuman

APPRIS ALT2 TSL 2

Gene PPFIA4, Length 2,967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-211ENST00000600426 NISCHQ9Y2I1 1504 aa25.69■■□□□ 1.7
PPFIA4-211ENST00000600426 SHROOM4Q9ULL8 1493 aa22.77■■□□□ 1.24
PPFIA4-211ENST00000600426 SUPT5HO00267 1087 aaKnown RBP22.36■■□□□ 1.17
PPFIA4-211ENST00000600426 DCAF8L2P0C7V8 631 aa22.29■■□□□ 1.16
PPFIA4-211ENST00000600426 ZCCHC6Q5VYS8 1495 aaKnown RBP21.66■■□□□ 1.06
PPFIA4-211ENST00000600426 CHIC1Q5VXU3 224 aa21.41■■□□□ 1.02
PPFIA4-211ENST00000600426 CCDC180Q9P1Z9 1646 aa21.4■■□□□ 1.02
PPFIA4-211ENST00000600426 MYO15BQ96JP2 1530 aa21.32■■□□□ 1
PPFIA4-211ENST00000600426 LOC105371045A0A1W2PR82 267 aa21.11■□□□□ 0.97
PPFIA4-211ENST00000600426 PCGF6Q9BYE7 350 aa21.09■□□□□ 0.97
PPFIA4-211ENST00000600426 HRCP23327 699 aa21.06■□□□□ 0.96
PPFIA4-211ENST00000600426 EHMT2Q96KQ7 1210 aa20.94■□□□□ 0.94
PPFIA4-211ENST00000600426 PPARGC1BQ86YN6 1023 aaKnown RBP20.92■□□□□ 0.94
PPFIA4-211ENST00000600426 FAM9AQ8IZU1 332 aaPredicted RBP20.8■□□□□ 0.92
PPFIA4-211ENST00000600426 SCRIBQ14160 1630 aa20.7■□□□□ 0.9
PPFIA4-211ENST00000600426 DCAF1Q9Y4B6 1507 aa20.69■□□□□ 0.9
PPFIA4-211ENST00000600426 ABCC9O60706 1549 aa20.62■□□□□ 0.89
PPFIA4-211ENST00000600426 TRIM41Q8WV44 630 aa20.58■□□□□ 0.88
PPFIA4-211ENST00000600426 RSF1Q96T23 1441 aaPredicted RBP20.52■□□□□ 0.87
PPFIA4-211ENST00000600426 CECR2Q9BXF3 1484 aa20.35■□□□□ 0.85
PPFIA4-211ENST00000600426 RB1CC1Q8TDY2 1594 aa20.32■□□□□ 0.84
PPFIA4-211ENST00000600426 TRIM26Q12899 539 aaPredicted RBP20.32■□□□□ 0.84
PPFIA4-211ENST00000600426 TTBK1Q5TCY1 1321 aaPredicted RBP20.2■□□□□ 0.82
PPFIA4-211ENST00000600426 MROH2BQ7Z745 1585 aa20.15■□□□□ 0.82
PPFIA4-211ENST00000600426 WIZO95785 1651 aa20.02■□□□□ 0.8
PPFIA4-211ENST00000600426 PABPN1Q86U42 306 aaKnown RBP eCLIP20.01■□□□□ 0.79
PPFIA4-211ENST00000600426 NACADO15069 1562 aa19.97■□□□□ 0.79
PPFIA4-211ENST00000600426 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.86■□□□□ 0.77
PPFIA4-211ENST00000600426 SCAF1Q9H7N4 1312 aaKnown RBP19.82■□□□□ 0.76
PPFIA4-211ENST00000600426 ZEB1P37275 1124 aaPredicted RBP19.78■□□□□ 0.76
PPFIA4-211ENST00000600426 ABCC8Q09428 1581 aa19.77■□□□□ 0.75
PPFIA4-211ENST00000600426 RANGAP1P46060 587 aaPredicted RBP19.73■□□□□ 0.75
PPFIA4-211ENST00000600426 UBTFP17480 764 aaKnown RBP19.71■□□□□ 0.75
PPFIA4-211ENST00000600426 CCER1Q8TC90 406 aaPredicted RBP19.71■□□□□ 0.75
PPFIA4-211ENST00000600426 CCDC88BA6NC98 1476 aa19.69■□□□□ 0.74
PPFIA4-211ENST00000600426 BAZ1AQ9NRL2 1556 aaPredicted RBP19.65■□□□□ 0.74
PPFIA4-211ENST00000600426 SOGA1O94964 1423 aa19.64■□□□□ 0.74
PPFIA4-211ENST00000600426 RUSC2Q8N2Y8 1516 aa19.58■□□□□ 0.72
PPFIA4-211ENST00000600426 CSRNP3Q8WYN3 585 aa19.51■□□□□ 0.71
PPFIA4-211ENST00000600426 SMARCA4P51532 1647 aa19.51■□□□□ 0.71
PPFIA4-211ENST00000600426 PELP1Q8IZL8 1130 aaKnown RBP19.5■□□□□ 0.71
PPFIA4-211ENST00000600426 TOP2AP11388 1531 aaKnown RBP19.49■□□□□ 0.71
PPFIA4-211ENST00000600426 SMARCA2P51531 1590 aa19.46■□□□□ 0.71
PPFIA4-211ENST00000600426 CEP162Q5TB80 1403 aa19.46■□□□□ 0.71
PPFIA4-211ENST00000600426 NEUROD1Q13562 356 aa19.44■□□□□ 0.7
PPFIA4-211ENST00000600426 EIF4G1Q04637 1599 aaKnown RBP19.43■□□□□ 0.7
PPFIA4-211ENST00000600426 HNRNPUL2Q1KMD3 747 aaKnown RBP19.41■□□□□ 0.7
PPFIA4-211ENST00000600426 UNC13AQ9UPW8 1703 aa19.39■□□□□ 0.69
PPFIA4-211ENST00000600426 ACIN1Q9UKV3 1341 aaKnown RBP19.36■□□□□ 0.69
PPFIA4-211ENST00000600426 WRNQ14191 1432 aaPredicted RBP eCLIP19.3■□□□□ 0.68
PPFIA4-211ENST00000600426 TNIKQ9UKE5 1360 aa19.28■□□□□ 0.68
PPFIA4-211ENST00000600426 GTF3C3Q9Y5Q9 886 aa19.28■□□□□ 0.68
PPFIA4-211ENST00000600426 DIEXFQ68CQ4 756 aaKnown RBP19.27■□□□□ 0.68
PPFIA4-211ENST00000600426 BICRAQ9NZM4 1560 aa19.26■□□□□ 0.67
PPFIA4-211ENST00000600426 APLP2Q06481 763 aa19.17■□□□□ 0.66
PPFIA4-211ENST00000600426 YTHDC1Q96MU7 727 aaKnown RBP19.17■□□□□ 0.66
PPFIA4-211ENST00000600426 GOLGA3Q08378 1498 aa19.16■□□□□ 0.66
PPFIA4-211ENST00000600426 SYNJ1O43426 1573 aa19.13■□□□□ 0.65
PPFIA4-211ENST00000600426 BAZ1BQ9UIG0 1483 aaKnown RBP19.13■□□□□ 0.65
PPFIA4-211ENST00000600426 ATAD2BQ9ULI0 1458 aa19.13■□□□□ 0.65
PPFIA4-211ENST00000600426 CLIP1P30622 1438 aa19.1■□□□□ 0.65
PPFIA4-211ENST00000600426 CENPBP07199 599 aaPredicted RBP19.1■□□□□ 0.65
PPFIA4-211ENST00000600426 RAPGEF2Q9Y4G8 1499 aa19.08■□□□□ 0.64
PPFIA4-211ENST00000600426 EEA1Q15075 1411 aa19.07■□□□□ 0.64
PPFIA4-211ENST00000600426 ITGAEP38570 1179 aa19.02■□□□□ 0.64
PPFIA4-211ENST00000600426 CEP164Q9UPV0 1460 aa19.01■□□□□ 0.63
PPFIA4-211ENST00000600426 ZNF316A6NFI3 1004 aaPredicted RBP18.99■□□□□ 0.63
PPFIA4-211ENST00000600426 KANK4Q5T7N3 995 aaPredicted RBP18.94■□□□□ 0.62
PPFIA4-211ENST00000600426 MIER1Q8N108 512 aa18.9■□□□□ 0.62
PPFIA4-211ENST00000600426 VPS8Q8N3P4 1428 aa18.89■□□□□ 0.61
PPFIA4-211ENST00000600426 PEG3Q9GZU2 1588 aa18.87■□□□□ 0.61
PPFIA4-211ENST00000600426 ATP1B4Q9UN42 357 aaPredicted RBP18.86■□□□□ 0.61
PPFIA4-211ENST00000600426 P3H3Q8IVL6 736 aa18.83■□□□□ 0.6
PPFIA4-211ENST00000600426 KIF21BO75037 1637 aa18.81■□□□□ 0.6
PPFIA4-211ENST00000600426 TOP2BQ02880 1626 aa18.7■□□□□ 0.58
PPFIA4-211ENST00000600426 CUX1P39880 1505 aa18.7■□□□□ 0.58
PPFIA4-211ENST00000600426 ARAP1Q96P48 1450 aa18.69■□□□□ 0.58
PPFIA4-211ENST00000600426 KIF27Q86VH2 1401 aa18.66■□□□□ 0.58
PPFIA4-211ENST00000600426 PRXQ9BXM0 1461 aa18.64■□□□□ 0.57
PPFIA4-211ENST00000600426 MYT1Q01538 1121 aa18.61■□□□□ 0.57
PPFIA4-211ENST00000600426 FAM50AQ14320 339 aaKnown RBP18.61■□□□□ 0.57
PPFIA4-211ENST00000600426 NCAPD3P42695 1498 aa18.61■□□□□ 0.57
PPFIA4-211ENST00000600426 CUX2O14529 1486 aa18.6■□□□□ 0.57
PPFIA4-211ENST00000600426 DHX57Q6P158 1386 aaKnown RBP18.6■□□□□ 0.57
PPFIA4-211ENST00000600426 IGF1RP08069 1367 aa18.53■□□□□ 0.56
PPFIA4-211ENST00000600426 CFTRP13569 1480 aa18.53■□□□□ 0.56
PPFIA4-211ENST00000600426 ARHGAP35Q9NRY4 1499 aa18.53■□□□□ 0.56
PPFIA4-211ENST00000600426 HIRIP3Q9BW71 556 aaPredicted RBP18.53■□□□□ 0.56
PPFIA4-211ENST00000600426 BIVM-ERCC5R4GMW8 1640 aa18.51■□□□□ 0.55
PPFIA4-211ENST00000600426 SIN3AQ96ST3 1273 aa18.5■□□□□ 0.55
PPFIA4-211ENST00000600426 CCNB3Q8WWL7 1395 aa18.5■□□□□ 0.55
PPFIA4-211ENST00000600426 CARMIL1Q5VZK9 1371 aa18.49■□□□□ 0.55
PPFIA4-211ENST00000600426 KCNH8Q96L42 1107 aa18.47■□□□□ 0.55
PPFIA4-211ENST00000600426 ERICH3Q5RHP9 1530 aa18.46■□□□□ 0.55
PPFIA4-211ENST00000600426 HMGXB3Q12766 1538 aa18.45■□□□□ 0.54
PPFIA4-211ENST00000600426 CADPSQ9ULU8 1353 aa18.45■□□□□ 0.54
PPFIA4-211ENST00000600426 DNAJC5BQ9UF47 199 aa18.43■□□□□ 0.54
PPFIA4-211ENST00000600426 FGD5Q6ZNL6 1462 aa18.42■□□□□ 0.54
PPFIA4-211ENST00000600426 RAB3GAP2Q9H2M9 1393 aa18.42■□□□□ 0.54
PPFIA4-211ENST00000600426 RAD54L2Q9Y4B4 1467 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms