RNA–Protein interactions for RNA: ENST00000599640.5

AC239809.3-201, humanhuman

TSL 5 BASIC

Gene AC239809.3, Length 4,266 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC239809.3-201ENST00000599640 NISCHQ9Y2I1 1504 aa27.08■■□□□ 1.93
AC239809.3-201ENST00000599640 DCAF8L2P0C7V8 631 aa26.34■■□□□ 1.81
AC239809.3-201ENST00000599640 SHROOM4Q9ULL8 1493 aa24.67■■□□□ 1.54
AC239809.3-201ENST00000599640 SUPT5HO00267 1087 aaKnown RBP24.3■■□□□ 1.48
AC239809.3-201ENST00000599640 ABCC9O60706 1549 aa23.83■■□□□ 1.41
AC239809.3-201ENST00000599640 PABPN1Q86U42 306 aaKnown RBP eCLIP23.28■■□□□ 1.32
AC239809.3-201ENST00000599640 EHMT2Q96KQ7 1210 aa23.28■■□□□ 1.32
AC239809.3-201ENST00000599640 FAM9AQ8IZU1 332 aaPredicted RBP22.84■■□□□ 1.25
AC239809.3-201ENST00000599640 CCDC180Q9P1Z9 1646 aa22.61■■□□□ 1.21
AC239809.3-201ENST00000599640 RANGAP1P46060 587 aaPredicted RBP22.49■■□□□ 1.19
AC239809.3-201ENST00000599640 TRIM41Q8WV44 630 aa22.44■■□□□ 1.18
AC239809.3-201ENST00000599640 ZCCHC6Q5VYS8 1495 aaKnown RBP22.39■■□□□ 1.18
AC239809.3-201ENST00000599640 SCRIBQ14160 1630 aa22.37■■□□□ 1.17
AC239809.3-201ENST00000599640 TTBK1Q5TCY1 1321 aaPredicted RBP22.2■■□□□ 1.14
AC239809.3-201ENST00000599640 RB1CC1Q8TDY2 1594 aa22.06■■□□□ 1.12
AC239809.3-201ENST00000599640 UBTFP17480 764 aaKnown RBP22.04■■□□□ 1.12
AC239809.3-201ENST00000599640 ATP1B4Q9UN42 357 aaPredicted RBP22.02■■□□□ 1.12
AC239809.3-201ENST00000599640 APLP2Q06481 763 aa21.94■■□□□ 1.1
AC239809.3-201ENST00000599640 NACADO15069 1562 aa21.87■■□□□ 1.09
AC239809.3-201ENST00000599640 CHIC1Q5VXU3 224 aa21.8■■□□□ 1.08
AC239809.3-201ENST00000599640 LOC105371045A0A1W2PR82 267 aa21.69■■□□□ 1.06
AC239809.3-201ENST00000599640 PPARGC1BQ86YN6 1023 aaKnown RBP21.67■■□□□ 1.06
AC239809.3-201ENST00000599640 FBLN2P98095 1184 aa21.63■■□□□ 1.05
AC239809.3-201ENST00000599640 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.51■■□□□ 1.03
AC239809.3-201ENST00000599640 HNRNPUL2Q1KMD3 747 aaKnown RBP21.51■■□□□ 1.03
AC239809.3-201ENST00000599640 CECR2Q9BXF3 1484 aa21.5■■□□□ 1.03
AC239809.3-201ENST00000599640 DCAF1Q9Y4B6 1507 aa21.44■■□□□ 1.02
AC239809.3-201ENST00000599640 RSF1Q96T23 1441 aaPredicted RBP21.39■■□□□ 1.02
AC239809.3-201ENST00000599640 PCGF6Q9BYE7 350 aa21.37■■□□□ 1.01
AC239809.3-201ENST00000599640 BAZ1BQ9UIG0 1483 aaKnown RBP21.25■□□□□ 0.99
AC239809.3-201ENST00000599640 P3H3Q8IVL6 736 aa21.19■□□□□ 0.98
AC239809.3-201ENST00000599640 ITGAEP38570 1179 aa21.18■□□□□ 0.98
AC239809.3-201ENST00000599640 ARID3CA6NKF2 412 aa21.17■□□□□ 0.98
AC239809.3-201ENST00000599640 MYT1LQ9UL68 1186 aa21.15■□□□□ 0.98
AC239809.3-201ENST00000599640 MROH2BQ7Z745 1585 aa21.11■□□□□ 0.97
AC239809.3-201ENST00000599640 BAZ1AQ9NRL2 1556 aaPredicted RBP21.1■□□□□ 0.97
AC239809.3-201ENST00000599640 CSRNP3Q8WYN3 585 aa21.07■□□□□ 0.96
AC239809.3-201ENST00000599640 MYO15BQ96JP2 1530 aa21.06■□□□□ 0.96
AC239809.3-201ENST00000599640 ERCC6Q03468 1493 aa20.97■□□□□ 0.95
AC239809.3-201ENST00000599640 CHMP7Q8WUX9 453 aaPredicted RBP20.87■□□□□ 0.93
AC239809.3-201ENST00000599640 CCER1Q8TC90 406 aaPredicted RBP20.85■□□□□ 0.93
AC239809.3-201ENST00000599640 DNAJC5BQ9UF47 199 aa20.79■□□□□ 0.92
AC239809.3-201ENST00000599640 WIZO95785 1651 aa20.79■□□□□ 0.92
AC239809.3-201ENST00000599640 ATAD2BQ9ULI0 1458 aa20.76■□□□□ 0.91
AC239809.3-201ENST00000599640 CCDC88BA6NC98 1476 aa20.75■□□□□ 0.91
AC239809.3-201ENST00000599640 WRNQ14191 1432 aaPredicted RBP eCLIP20.74■□□□□ 0.91
AC239809.3-201ENST00000599640 FAM50AQ14320 339 aaKnown RBP20.73■□□□□ 0.91
AC239809.3-201ENST00000599640 SMARCA2P51531 1590 aa20.73■□□□□ 0.91
AC239809.3-201ENST00000599640 HRCP23327 699 aa20.71■□□□□ 0.91
AC239809.3-201ENST00000599640 SMARCA4P51532 1647 aa20.62■□□□□ 0.89
AC239809.3-201ENST00000599640 TRIM26Q12899 539 aaPredicted RBP20.6■□□□□ 0.89
AC239809.3-201ENST00000599640 ZNF777Q9ULD5 760 aaPredicted RBP20.58■□□□□ 0.89
AC239809.3-201ENST00000599640 EIF4G1Q04637 1599 aaKnown RBP20.58■□□□□ 0.89
AC239809.3-201ENST00000599640 CADPSQ9ULU8 1353 aa20.58■□□□□ 0.88
AC239809.3-201ENST00000599640 PDS5BQ9NTI5 1447 aa20.56■□□□□ 0.88
AC239809.3-201ENST00000599640 TDRD9Q8NDG6 1382 aaKnown RBP20.54■□□□□ 0.88
AC239809.3-201ENST00000599640 NPM1P06748 294 aaKnown RBP eCLIP20.52■□□□□ 0.88
AC239809.3-201ENST00000599640 ABCC8Q09428 1581 aa20.5■□□□□ 0.87
AC239809.3-201ENST00000599640 TOP2AP11388 1531 aaKnown RBP20.46■□□□□ 0.87
AC239809.3-201ENST00000599640 CUX2O14529 1486 aa20.43■□□□□ 0.86
AC239809.3-201ENST00000599640 KIF27Q86VH2 1401 aa20.43■□□□□ 0.86
AC239809.3-201ENST00000599640 BICRAQ9NZM4 1560 aa20.42■□□□□ 0.86
AC239809.3-201ENST00000599640 SOGA1O94964 1423 aa20.41■□□□□ 0.86
AC239809.3-201ENST00000599640 TRIM52Q96A61 297 aa20.41■□□□□ 0.86
AC239809.3-201ENST00000599640 KCNH8Q96L42 1107 aa20.41■□□□□ 0.86
AC239809.3-201ENST00000599640 CC2D2AQ9P2K1 1620 aa20.38■□□□□ 0.85
AC239809.3-201ENST00000599640 CDK11AQ9UQ88 783 aaPredicted RBP20.37■□□□□ 0.85
AC239809.3-201ENST00000599640 PLPPR3Q6T4P5 718 aa20.36■□□□□ 0.85
AC239809.3-201ENST00000599640 NCAPD3P42695 1498 aa20.35■□□□□ 0.85
AC239809.3-201ENST00000599640 NESP48681 1621 aa20.32■□□□□ 0.84
AC239809.3-201ENST00000599640 FANCD2Q9BXW9 1451 aa20.31■□□□□ 0.84
AC239809.3-201ENST00000599640 CEP164Q9UPV0 1460 aa20.29■□□□□ 0.84
AC239809.3-201ENST00000599640 POLR3GLQ9BT43 218 aa20.27■□□□□ 0.84
AC239809.3-201ENST00000599640 CARMIL1Q5VZK9 1371 aa20.27■□□□□ 0.84
AC239809.3-201ENST00000599640 PELP1Q8IZL8 1130 aaKnown RBP20.25■□□□□ 0.83
AC239809.3-201ENST00000599640 CLIP1P30622 1438 aa20.25■□□□□ 0.83
AC239809.3-201ENST00000599640 CNGB1Q14028 1251 aaPredicted RBP20.23■□□□□ 0.83
AC239809.3-201ENST00000599640 CHIC2Q9UKJ5 165 aa20.22■□□□□ 0.83
AC239809.3-201ENST00000599640 NEUROD1Q13562 356 aa20.2■□□□□ 0.82
AC239809.3-201ENST00000599640 GOLGA3Q08378 1498 aa20.14■□□□□ 0.82
AC239809.3-201ENST00000599640 EEA1Q15075 1411 aa20.14■□□□□ 0.81
AC239809.3-201ENST00000599640 MTUS2Q5JR59 1369 aa20.14■□□□□ 0.81
AC239809.3-201ENST00000599640 TRHP20396 242 aaPredicted RBP20.14■□□□□ 0.81
AC239809.3-201ENST00000599640 PLEKHD1A6NEE1 506 aa20.12■□□□□ 0.81
AC239809.3-201ENST00000599640 ZEB1P37275 1124 aaPredicted RBP20.12■□□□□ 0.81
AC239809.3-201ENST00000599640 ZNF326Q5BKZ1 582 aaKnown RBP20.12■□□□□ 0.81
AC239809.3-201ENST00000599640 UNC13AQ9UPW8 1703 aa20.11■□□□□ 0.81
AC239809.3-201ENST00000599640 CEP162Q5TB80 1403 aa20.1■□□□□ 0.81
AC239809.3-201ENST00000599640 RAD54L2Q9Y4B4 1467 aa20.09■□□□□ 0.81
AC239809.3-201ENST00000599640 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.05■□□□□ 0.8
AC239809.3-201ENST00000599640 RUSC2Q8N2Y8 1516 aa20.05■□□□□ 0.8
AC239809.3-201ENST00000599640 ESF1Q9H501 851 aaKnown RBP20.01■□□□□ 0.79
AC239809.3-201ENST00000599640 AQRO60306 1485 aaKnown RBP eCLIP20■□□□□ 0.79
AC239809.3-201ENST00000599640 CYB5RLQ6IPT4 315 aa20■□□□□ 0.79
AC239809.3-201ENST00000599640 FGD5Q6ZNL6 1462 aa19.98■□□□□ 0.79
AC239809.3-201ENST00000599640 BCANQ96GW7 911 aa19.97■□□□□ 0.79
AC239809.3-201ENST00000599640 JPH4Q96JJ6 628 aa19.97■□□□□ 0.79
AC239809.3-201ENST00000599640 SLC4A1APQ9BWU0 796 aaKnown RBP19.97■□□□□ 0.79
AC239809.3-201ENST00000599640 TNIKQ9UKE5 1360 aa19.96■□□□□ 0.79
AC239809.3-201ENST00000599640 TSPY4P0CV99 314 aa19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms