RNA–Protein interactions for RNA: ENST00000599151.5

FARP1-227, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 641 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-227ENST00000599151 AEBP2Q6ZN18 517 aaPredicted RBP29.75■■■□□ 2.35
FARP1-227ENST00000599151 CHIC1Q5VXU3 224 aa28.48■■■□□ 2.15
FARP1-227ENST00000599151 SENP3Q9H4L4 574 aaPredicted RBP25.54■■□□□ 1.68
FARP1-227ENST00000599151 PHF23Q9BUL5 403 aaPredicted RBP25.15■■□□□ 1.62
FARP1-227ENST00000599151 FOXD1Q16676 465 aa23.67■■□□□ 1.38
FARP1-227ENST00000599151 PLPPR3Q6T4P5 718 aa22.87■■□□□ 1.25
FARP1-227ENST00000599151 MSH5O43196 834 aa22.25■■□□□ 1.15
FARP1-227ENST00000599151 PIAS4Q8N2W9 510 aaPredicted RBP22.2■■□□□ 1.14
FARP1-227ENST00000599151 PPP6R1Q9UPN7 881 aa22.17■■□□□ 1.14
FARP1-227ENST00000599151 ADRA2BP18089 450 aa22.12■■□□□ 1.13
FARP1-227ENST00000599151 POTEDQ86YR6 584 aa21.39■■□□□ 1.01
FARP1-227ENST00000599151 SCAF1Q9H7N4 1312 aaKnown RBP20.47■□□□□ 0.87
FARP1-227ENST00000599151 MAPK8IP2Q13387 824 aaPredicted RBP20.26■□□□□ 0.83
FARP1-227ENST00000599151 DMRT2Q9Y5R5 561 aa20.23■□□□□ 0.83
FARP1-227ENST00000599151 PPP4R3CPQ6ZMV5 832 aa20■□□□□ 0.79
FARP1-227ENST00000599151 CNKSR2Q8WXI2 1034 aa19.66■□□□□ 0.74
FARP1-227ENST00000599151 HOXD11P31277 338 aaPredicted RBP19.54■□□□□ 0.72
FARP1-227ENST00000599151 RNF216Q9NWF9 866 aaPredicted RBP19.45■□□□□ 0.7
FARP1-227ENST00000599151 NCBP3Q53F19 620 aaKnown RBP19.39■□□□□ 0.69
FARP1-227ENST00000599151 DCAF8L1A6NGE4 600 aa19.38■□□□□ 0.69
FARP1-227ENST00000599151 CACNB1Q02641 598 aaPredicted RBP18.97■□□□□ 0.63
FARP1-227ENST00000599151 NPM3O75607 178 aaKnown RBP18.96■□□□□ 0.63
FARP1-227ENST00000599151 DNAJC5BQ9UF47 199 aa18.95■□□□□ 0.62
FARP1-227ENST00000599151 RNF39Q9H2S5 420 aa18.92■□□□□ 0.62
FARP1-227ENST00000599151 C1QBPQ07021 282 aaKnown RBP18.73■□□□□ 0.59
FARP1-227ENST00000599151 KCNA4P22459 653 aa18.67■□□□□ 0.58
FARP1-227ENST00000599151 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.64■□□□□ 0.57
FARP1-227ENST00000599151 U3KPZ7 1027 aaPredicted RBP18.18■□□□□ 0.5
FARP1-227ENST00000599151 SLC4A2P04920 1241 aa18.05■□□□□ 0.48
FARP1-227ENST00000599151 APLP2Q06481 763 aa17.91■□□□□ 0.46
FARP1-227ENST00000599151 CAPN15O75808 1086 aa17.9■□□□□ 0.46
FARP1-227ENST00000599151 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.89■□□□□ 0.45
FARP1-227ENST00000599151 HNRNPUL2Q1KMD3 747 aaKnown RBP17.89■□□□□ 0.45
FARP1-227ENST00000599151 SPINK5Q9NQ38 1064 aaPredicted RBP17.85■□□□□ 0.45
FARP1-227ENST00000599151 SAMD1Q6SPF0 538 aaPredicted RBP17.75■□□□□ 0.43
FARP1-227ENST00000599151 DSG3P32926 999 aa17.74■□□□□ 0.43
FARP1-227ENST00000599151 SLC4A1APQ9BWU0 796 aaKnown RBP17.72■□□□□ 0.43
FARP1-227ENST00000599151 ZNF219Q9P2Y4 722 aaPredicted RBP17.68■□□□□ 0.42
FARP1-227ENST00000599151 MYCNP04198 464 aaPredicted RBP17.62■□□□□ 0.41
FARP1-227ENST00000599151 TRHP20396 242 aaPredicted RBP17.62■□□□□ 0.41
FARP1-227ENST00000599151 FOXD4L1Q9NU39 408 aa17.47■□□□□ 0.39
FARP1-227ENST00000599151 ABCB7O75027 752 aa17.42■□□□□ 0.38
FARP1-227ENST00000599151 POLA2Q14181 598 aa17.18■□□□□ 0.34
FARP1-227ENST00000599151 ZBTB22O15209 634 aa17.13■□□□□ 0.33
FARP1-227ENST00000599151 RBM42Q9BTD8 480 aaKnown RBP17.05■□□□□ 0.32
FARP1-227ENST00000599151 ATF5Q9Y2D1 282 aaPredicted RBP17.04■□□□□ 0.32
FARP1-227ENST00000599151 ATXN8OSP0DMR3 200 aa17■□□□□ 0.31
FARP1-227ENST00000599151 ZBTB12Q9Y330 459 aaPredicted RBP16.98■□□□□ 0.31
FARP1-227ENST00000599151 POTEHQ6S545 545 aa16.82■□□□□ 0.28
FARP1-227ENST00000599151 AKT1S1Q96B36 256 aa16.64■□□□□ 0.25
FARP1-227ENST00000599151 CSRNP3Q8WYN3 585 aa16.61■□□□□ 0.25
FARP1-227ENST00000599151 OSCARQ8IYS5 282 aa16.58■□□□□ 0.24
FARP1-227ENST00000599151 FBLN2P98095 1184 aa16.57■□□□□ 0.24
FARP1-227ENST00000599151 CHRDL2Q6WN34 429 aa16.54■□□□□ 0.24
FARP1-227ENST00000599151 EHMT2Q96KQ7 1210 aa16.48■□□□□ 0.23
FARP1-227ENST00000599151 REM2Q8IYK8 340 aaPredicted RBP16.42■□□□□ 0.22
FARP1-227ENST00000599151 SPDYE2BA6NHP3 402 aa16.4■□□□□ 0.22
FARP1-227ENST00000599151 SPDYE6P0CI01 402 aa16.4■□□□□ 0.22
FARP1-227ENST00000599151 SPDYE2Q495Y8 402 aa16.4■□□□□ 0.22
FARP1-227ENST00000599151 MKRN4PQ13434 485 aaPredicted RBP16.29■□□□□ 0.2
FARP1-227ENST00000599151 PITPNM1O00562 1244 aa16.22■□□□□ 0.19
FARP1-227ENST00000599151 ZNF692Q9BU19 519 aaPredicted RBP16.2■□□□□ 0.18
FARP1-227ENST00000599151 PIP4P2Q8N4L2 257 aa16.14■□□□□ 0.17
FARP1-227ENST00000599151 SSUH2Q9Y2M2 353 aa16.14■□□□□ 0.17
FARP1-227ENST00000599151 SPDYE1Q8NFV5 336 aaPredicted RBP16.1■□□□□ 0.17
FARP1-227ENST00000599151 FXR2P51116 673 aaKnown RBP eCLIP16.09■□□□□ 0.17
FARP1-227ENST00000599151 CLEC11AQ9Y240 323 aa15.99■□□□□ 0.15
FARP1-227ENST00000599151 PABPN1Q86U42 306 aaKnown RBP eCLIP15.92■□□□□ 0.14
FARP1-227ENST00000599151 HAX1O00165 279 aa15.86■□□□□ 0.13
FARP1-227ENST00000599151 SP7Q8TDD2 431 aaPredicted RBP15.84■□□□□ 0.13
FARP1-227ENST00000599151 PRKAR2AP13861 404 aaKnown RBP15.83■□□□□ 0.12
FARP1-227ENST00000599151 PRR29P0C7W0 189 aa15.79■□□□□ 0.12
FARP1-227ENST00000599151 SPDYE4A6NLX3 237 aa15.68■□□□□ 0.1
FARP1-227ENST00000599151 STAG3Q9UJ98 1225 aa15.64■□□□□ 0.09
FARP1-227ENST00000599151 CHADLQ6NUI6 762 aa15.6■□□□□ 0.09
FARP1-227ENST00000599151 C19orf67A6NJJ6 358 aa15.57■□□□□ 0.08
FARP1-227ENST00000599151 EVX2Q03828 476 aa15.53■□□□□ 0.08
FARP1-227ENST00000599151 FARP1Q9Y4F1 1045 aaPredicted RBP15.47■□□□□ 0.07
FARP1-227ENST00000599151 CREBZFQ9NS37 354 aa15.35■□□□□ 0.05
FARP1-227ENST00000599151 CD44P16070 742 aaKnown RBP15.34■□□□□ 0.05
FARP1-227ENST00000599151 PROM2Q8N271 834 aa15.3■□□□□ 0.04
FARP1-227ENST00000599151 GABBR2O75899 941 aa15.29■□□□□ 0.04
FARP1-227ENST00000599151 CLCN6P51797 869 aa15.29■□□□□ 0.04
FARP1-227ENST00000599151 NPM1P06748 294 aaKnown RBP eCLIP15.21■□□□□ 0.03
FARP1-227ENST00000599151 PAK3O75914 559 aaPredicted RBP15.15■□□□□ 0.02
FARP1-227ENST00000599151 ZRANB1Q9UGI0 708 aa15.14■□□□□ 0.01
FARP1-227ENST00000599151 ZNF579Q8NAF0 562 aaKnown RBP15.13■□□□□ 0.01
FARP1-227ENST00000599151 MNX1P50219 401 aaPredicted RBP15.08■□□□□ 0
FARP1-227ENST00000599151 PLEKHG5O94827 1062 aa15.07■□□□□ 0
FARP1-227ENST00000599151 FKBP8Q14318 412 aa14.99□□□□□ -0.01
FARP1-227ENST00000599151 MIER1Q8N108 512 aa14.97□□□□□ -0.01
FARP1-227ENST00000599151 DCBLD2Q96PD2 775 aa14.97□□□□□ -0.01
FARP1-227ENST00000599151 POTEIP0CG38 1075 aa14.89□□□□□ -0.03
FARP1-227ENST00000599151 PLCD3Q8N3E9 789 aa14.88□□□□□ -0.03
FARP1-227ENST00000599151 PHF12Q96QT6 1004 aa14.87□□□□□ -0.03
FARP1-227ENST00000599151 GALR2O43603 387 aaPredicted RBP14.86□□□□□ -0.03
FARP1-227ENST00000599151 LHX8Q68G74 356 aa14.86□□□□□ -0.03
FARP1-227ENST00000599151 ZBTB47Q9UFB7 747 aaPredicted RBP14.86□□□□□ -0.03
FARP1-227ENST00000599151 TSPYL2Q9H2G4 693 aaPredicted RBP14.82□□□□□ -0.04
FARP1-227ENST00000599151 FBXO3Q9UK99 471 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms