RNA–Protein interactions for RNA: ENST00000598698.5

FARP1-225, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-225ENST00000598698 AEBP2Q6ZN18 517 aaPredicted RBP30.12■■■□□ 2.41
FARP1-225ENST00000598698 CHIC1Q5VXU3 224 aa28.75■■■□□ 2.19
FARP1-225ENST00000598698 SENP3Q9H4L4 574 aaPredicted RBP25.77■■□□□ 1.72
FARP1-225ENST00000598698 PHF23Q9BUL5 403 aaPredicted RBP25.41■■□□□ 1.66
FARP1-225ENST00000598698 FOXD1Q16676 465 aa23.94■■□□□ 1.42
FARP1-225ENST00000598698 PLPPR3Q6T4P5 718 aa23.03■■□□□ 1.28
FARP1-225ENST00000598698 MSH5O43196 834 aa22.46■■□□□ 1.19
FARP1-225ENST00000598698 PPP6R1Q9UPN7 881 aa22.42■■□□□ 1.18
FARP1-225ENST00000598698 PIAS4Q8N2W9 510 aaPredicted RBP22.39■■□□□ 1.17
FARP1-225ENST00000598698 ADRA2BP18089 450 aa22.33■■□□□ 1.17
FARP1-225ENST00000598698 POTEDQ86YR6 584 aa21.71■■□□□ 1.07
FARP1-225ENST00000598698 SCAF1Q9H7N4 1312 aaKnown RBP20.57■□□□□ 0.88
FARP1-225ENST00000598698 MAPK8IP2Q13387 824 aaPredicted RBP20.48■□□□□ 0.87
FARP1-225ENST00000598698 DMRT2Q9Y5R5 561 aa20.44■□□□□ 0.86
FARP1-225ENST00000598698 PPP4R3CPQ6ZMV5 832 aa20.15■□□□□ 0.82
FARP1-225ENST00000598698 CNKSR2Q8WXI2 1034 aa19.8■□□□□ 0.76
FARP1-225ENST00000598698 HOXD11P31277 338 aaPredicted RBP19.73■□□□□ 0.75
FARP1-225ENST00000598698 RNF216Q9NWF9 866 aaPredicted RBP19.61■□□□□ 0.73
FARP1-225ENST00000598698 DCAF8L1A6NGE4 600 aa19.5■□□□□ 0.71
FARP1-225ENST00000598698 NCBP3Q53F19 620 aaKnown RBP19.46■□□□□ 0.71
FARP1-225ENST00000598698 CACNB1Q02641 598 aaPredicted RBP19.16■□□□□ 0.66
FARP1-225ENST00000598698 DNAJC5BQ9UF47 199 aa19.14■□□□□ 0.65
FARP1-225ENST00000598698 RNF39Q9H2S5 420 aa19.13■□□□□ 0.65
FARP1-225ENST00000598698 NPM3O75607 178 aaKnown RBP19.11■□□□□ 0.65
FARP1-225ENST00000598698 EHMT2Q96KQ7 1210 aa18.99■□□□□ 0.63
FARP1-225ENST00000598698 C1QBPQ07021 282 aaKnown RBP18.91■□□□□ 0.62
FARP1-225ENST00000598698 KCNA4P22459 653 aa18.86■□□□□ 0.61
FARP1-225ENST00000598698 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.75■□□□□ 0.59
FARP1-225ENST00000598698 U3KPZ7 1027 aaPredicted RBP18.36■□□□□ 0.53
FARP1-225ENST00000598698 SLC4A2P04920 1241 aa18.23■□□□□ 0.51
FARP1-225ENST00000598698 CSRNP3Q8WYN3 585 aa18.16■□□□□ 0.5
FARP1-225ENST00000598698 SLC4A1APQ9BWU0 796 aaKnown RBP18.15■□□□□ 0.5
FARP1-225ENST00000598698 SPINK5Q9NQ38 1064 aaPredicted RBP18.03■□□□□ 0.48
FARP1-225ENST00000598698 CAPN15O75808 1086 aa18.02■□□□□ 0.48
FARP1-225ENST00000598698 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.97■□□□□ 0.47
FARP1-225ENST00000598698 APLP2Q06481 763 aa17.97■□□□□ 0.47
FARP1-225ENST00000598698 HNRNPUL2Q1KMD3 747 aaKnown RBP17.97■□□□□ 0.47
FARP1-225ENST00000598698 DSG3P32926 999 aa17.93■□□□□ 0.46
FARP1-225ENST00000598698 SAMD1Q6SPF0 538 aaPredicted RBP17.85■□□□□ 0.45
FARP1-225ENST00000598698 ZNF219Q9P2Y4 722 aaPredicted RBP17.8■□□□□ 0.44
FARP1-225ENST00000598698 TRHP20396 242 aaPredicted RBP17.74■□□□□ 0.43
FARP1-225ENST00000598698 MYCNP04198 464 aaPredicted RBP17.72■□□□□ 0.43
FARP1-225ENST00000598698 FOXD4L1Q9NU39 408 aa17.57■□□□□ 0.4
FARP1-225ENST00000598698 ABCB7O75027 752 aa17.56■□□□□ 0.4
FARP1-225ENST00000598698 ZBTB22O15209 634 aa17.4■□□□□ 0.38
FARP1-225ENST00000598698 POLA2Q14181 598 aa17.3■□□□□ 0.36
FARP1-225ENST00000598698 ATF5Q9Y2D1 282 aaPredicted RBP17.21■□□□□ 0.35
FARP1-225ENST00000598698 RBM42Q9BTD8 480 aaKnown RBP17.18■□□□□ 0.34
FARP1-225ENST00000598698 ATXN8OSP0DMR3 200 aa17.08■□□□□ 0.32
FARP1-225ENST00000598698 ZBTB12Q9Y330 459 aaPredicted RBP17.06■□□□□ 0.32
FARP1-225ENST00000598698 SLC24A1O60721 1099 aa17.05■□□□□ 0.32
FARP1-225ENST00000598698 POTEHQ6S545 545 aa17.04■□□□□ 0.32
FARP1-225ENST00000598698 RTN4Q9NQC3 1192 aaKnown RBP16.9■□□□□ 0.3
FARP1-225ENST00000598698 AMER1Q5JTC6 1135 aaPredicted RBP16.82■□□□□ 0.28
FARP1-225ENST00000598698 AKT1S1Q96B36 256 aa16.78■□□□□ 0.28
FARP1-225ENST00000598698 OSCARQ8IYS5 282 aa16.72■□□□□ 0.27
FARP1-225ENST00000598698 CHRDL2Q6WN34 429 aa16.7■□□□□ 0.26
FARP1-225ENST00000598698 FBLN2P98095 1184 aa16.63■□□□□ 0.25
FARP1-225ENST00000598698 REM2Q8IYK8 340 aaPredicted RBP16.57■□□□□ 0.24
FARP1-225ENST00000598698 SPDYE2BA6NHP3 402 aa16.51■□□□□ 0.23
FARP1-225ENST00000598698 SPDYE6P0CI01 402 aa16.51■□□□□ 0.23
FARP1-225ENST00000598698 SPDYE2Q495Y8 402 aa16.51■□□□□ 0.23
FARP1-225ENST00000598698 MKRN4PQ13434 485 aaPredicted RBP16.45■□□□□ 0.22
FARP1-225ENST00000598698 FKBP8Q14318 412 aa16.39■□□□□ 0.21
FARP1-225ENST00000598698 PITPNM1O00562 1244 aa16.37■□□□□ 0.21
FARP1-225ENST00000598698 PIP4P2Q8N4L2 257 aa16.31■□□□□ 0.2
FARP1-225ENST00000598698 SSUH2Q9Y2M2 353 aa16.29■□□□□ 0.2
FARP1-225ENST00000598698 ZNF692Q9BU19 519 aaPredicted RBP16.28■□□□□ 0.2
FARP1-225ENST00000598698 FXR2P51116 673 aaKnown RBP eCLIP16.26■□□□□ 0.19
FARP1-225ENST00000598698 SPDYE1Q8NFV5 336 aaPredicted RBP16.2■□□□□ 0.18
FARP1-225ENST00000598698 CLEC11AQ9Y240 323 aa16.08■□□□□ 0.16
FARP1-225ENST00000598698 PABPN1Q86U42 306 aaKnown RBP eCLIP16.02■□□□□ 0.16
FARP1-225ENST00000598698 SP7Q8TDD2 431 aaPredicted RBP16.02■□□□□ 0.16
FARP1-225ENST00000598698 HAX1O00165 279 aa15.98■□□□□ 0.15
FARP1-225ENST00000598698 PRKAR2AP13861 404 aaKnown RBP15.96■□□□□ 0.15
FARP1-225ENST00000598698 PRR29P0C7W0 189 aa15.88■□□□□ 0.13
FARP1-225ENST00000598698 SPDYE4A6NLX3 237 aa15.74■□□□□ 0.11
FARP1-225ENST00000598698 EVX2Q03828 476 aa15.74■□□□□ 0.11
FARP1-225ENST00000598698 CHADLQ6NUI6 762 aa15.74■□□□□ 0.11
FARP1-225ENST00000598698 C19orf67A6NJJ6 358 aa15.73■□□□□ 0.11
FARP1-225ENST00000598698 STAG3Q9UJ98 1225 aa15.7■□□□□ 0.1
FARP1-225ENST00000598698 FARP1Q9Y4F1 1045 aaPredicted RBP15.59■□□□□ 0.09
FARP1-225ENST00000598698 PLCB2Q00722 1185 aa15.5■□□□□ 0.07
FARP1-225ENST00000598698 CREBZFQ9NS37 354 aa15.48■□□□□ 0.07
FARP1-225ENST00000598698 GABBR2O75899 941 aa15.46■□□□□ 0.07
FARP1-225ENST00000598698 CD44P16070 742 aaKnown RBP15.46■□□□□ 0.07
FARP1-225ENST00000598698 PROM2Q8N271 834 aa15.43■□□□□ 0.06
FARP1-225ENST00000598698 FBXO3Q9UK99 471 aa15.41■□□□□ 0.06
FARP1-225ENST00000598698 CLCN6P51797 869 aa15.39■□□□□ 0.05
FARP1-225ENST00000598698 HAP1P54257 671 aaPredicted RBP15.34■□□□□ 0.05
FARP1-225ENST00000598698 DCAF8L2P0C7V8 631 aa15.29■□□□□ 0.04
FARP1-225ENST00000598698 NPM1P06748 294 aaKnown RBP eCLIP15.26■□□□□ 0.03
FARP1-225ENST00000598698 ZNF579Q8NAF0 562 aaKnown RBP15.26■□□□□ 0.03
FARP1-225ENST00000598698 ZRANB1Q9UGI0 708 aa15.25■□□□□ 0.03
FARP1-225ENST00000598698 MNX1P50219 401 aaPredicted RBP15.24■□□□□ 0.03
FARP1-225ENST00000598698 VASPP50552 380 aaPredicted RBP15.23■□□□□ 0.03
FARP1-225ENST00000598698 PAK3O75914 559 aaPredicted RBP15.2■□□□□ 0.02
FARP1-225ENST00000598698 BCANQ96GW7 911 aa15.19■□□□□ 0.02
FARP1-225ENST00000598698 PRKCSHP14314 528 aaPredicted RBP15.15■□□□□ 0.02
FARP1-225ENST00000598698 POTEIP0CG38 1075 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms