RNA–Protein interactions for RNA: ENST00000598594.1

PAF1-208, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 280 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-208ENST00000598594 AEBP2Q6ZN18 517 aaPredicted RBP16.5■□□□□ 0.23
PAF1-208ENST00000598594 CHIC1Q5VXU3 224 aa15.56■□□□□ 0.08
PAF1-208ENST00000598594 SENP3Q9H4L4 574 aaPredicted RBP14.21□□□□□ -0.13
PAF1-208ENST00000598594 PHF23Q9BUL5 403 aaPredicted RBP13.93□□□□□ -0.18
PAF1-208ENST00000598594 FOXD1Q16676 465 aa13.18□□□□□ -0.3
PAF1-208ENST00000598594 MSH5O43196 834 aa12.51□□□□□ -0.41
PAF1-208ENST00000598594 POTEDQ86YR6 584 aa12.43□□□□□ -0.42
PAF1-208ENST00000598594 PLPPR3Q6T4P5 718 aa12.38□□□□□ -0.43
PAF1-208ENST00000598594 PIAS4Q8N2W9 510 aaPredicted RBP12.31□□□□□ -0.44
PAF1-208ENST00000598594 PPP6R1Q9UPN7 881 aa12.14□□□□□ -0.47
PAF1-208ENST00000598594 ADRA2BP18089 450 aa12.09□□□□□ -0.47
PAF1-208ENST00000598594 SLC24A1O60721 1099 aa11.67□□□□□ -0.54
PAF1-208ENST00000598594 EHMT2Q96KQ7 1210 aa11.38□□□□□ -0.59
PAF1-208ENST00000598594 DMRT2Q9Y5R5 561 aa11.22□□□□□ -0.61
PAF1-208ENST00000598594 SCAF1Q9H7N4 1312 aaKnown RBP11.18□□□□□ -0.62
PAF1-208ENST00000598594 MAPK8IP2Q13387 824 aaPredicted RBP11.13□□□□□ -0.63
PAF1-208ENST00000598594 CACNB1Q02641 598 aaPredicted RBP10.78□□□□□ -0.68
PAF1-208ENST00000598594 PPP4R3CPQ6ZMV5 832 aa10.78□□□□□ -0.68
PAF1-208ENST00000598594 HOXD11P31277 338 aaPredicted RBP10.74□□□□□ -0.69
PAF1-208ENST00000598594 RTN4Q9NQC3 1192 aaKnown RBP10.74□□□□□ -0.69
PAF1-208ENST00000598594 DCAF8L1A6NGE4 600 aa10.71□□□□□ -0.69
PAF1-208ENST00000598594 CSRNP3Q8WYN3 585 aa10.69□□□□□ -0.7
PAF1-208ENST00000598594 AMER1Q5JTC6 1135 aaPredicted RBP10.66□□□□□ -0.7
PAF1-208ENST00000598594 CNKSR2Q8WXI2 1034 aa10.66□□□□□ -0.7
PAF1-208ENST00000598594 KCNA4P22459 653 aa10.65□□□□□ -0.7
PAF1-208ENST00000598594 RNF216Q9NWF9 866 aaPredicted RBP10.62□□□□□ -0.71
PAF1-208ENST00000598594 RNF39Q9H2S5 420 aa10.61□□□□□ -0.71
PAF1-208ENST00000598594 DNAJC5BQ9UF47 199 aa10.49□□□□□ -0.73
PAF1-208ENST00000598594 C1QBPQ07021 282 aaKnown RBP10.48□□□□□ -0.73
PAF1-208ENST00000598594 NCBP3Q53F19 620 aaKnown RBP10.47□□□□□ -0.73
PAF1-208ENST00000598594 SLC4A1APQ9BWU0 796 aaKnown RBP10.33□□□□□ -0.76
PAF1-208ENST00000598594 DAXXQ9UER7 740 aaPredicted RBP10.32□□□□□ -0.76
PAF1-208ENST00000598594 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.21□□□□□ -0.77
PAF1-208ENST00000598594 NPM3O75607 178 aaKnown RBP10.16□□□□□ -0.78
PAF1-208ENST00000598594 PRKCSHP14314 528 aaPredicted RBP10.11□□□□□ -0.79
PAF1-208ENST00000598594 U3KPZ7 1027 aaPredicted RBP9.96□□□□□ -0.82
PAF1-208ENST00000598594 ARXQ96QS3 562 aa9.93□□□□□ -0.82
PAF1-208ENST00000598594 BCANQ96GW7 911 aa9.9□□□□□ -0.82
PAF1-208ENST00000598594 TAOK2Q9UL54 1235 aa9.9□□□□□ -0.82
PAF1-208ENST00000598594 CAPN15O75808 1086 aa9.86□□□□□ -0.83
PAF1-208ENST00000598594 DSG3P32926 999 aa9.86□□□□□ -0.83
PAF1-208ENST00000598594 SPINK5Q9NQ38 1064 aaPredicted RBP9.84□□□□□ -0.83
PAF1-208ENST00000598594 ZBTB22O15209 634 aa9.83□□□□□ -0.84
PAF1-208ENST00000598594 TIMELESSQ9UNS1 1208 aa9.82□□□□□ -0.84
PAF1-208ENST00000598594 APLP2Q06481 763 aa9.79□□□□□ -0.84
PAF1-208ENST00000598594 PLCB2Q00722 1185 aa9.77□□□□□ -0.85
PAF1-208ENST00000598594 TPRNQ4KMQ1 711 aa9.75□□□□□ -0.85
PAF1-208ENST00000598594 TULP1O00294 542 aaPredicted RBP9.73□□□□□ -0.85
PAF1-208ENST00000598594 SLC4A2P04920 1241 aa9.73□□□□□ -0.85
PAF1-208ENST00000598594 POTEHQ6S545 545 aa9.73□□□□□ -0.85
PAF1-208ENST00000598594 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.72□□□□□ -0.85
PAF1-208ENST00000598594 HNRNPUL2Q1KMD3 747 aaKnown RBP9.72□□□□□ -0.85
PAF1-208ENST00000598594 ZNF219Q9P2Y4 722 aaPredicted RBP9.72□□□□□ -0.85
PAF1-208ENST00000598594 HAP1P54257 671 aaPredicted RBP9.7□□□□□ -0.86
PAF1-208ENST00000598594 HOMEZQ8IX15 550 aa9.65□□□□□ -0.86
PAF1-208ENST00000598594 TRHP20396 242 aaPredicted RBP9.64□□□□□ -0.87
PAF1-208ENST00000598594 SAMD1Q6SPF0 538 aaPredicted RBP9.63□□□□□ -0.87
PAF1-208ENST00000598594 FKBP8Q14318 412 aa9.6□□□□□ -0.87
PAF1-208ENST00000598594 ABCB7O75027 752 aa9.58□□□□□ -0.88
PAF1-208ENST00000598594 RANGAP1P46060 587 aaPredicted RBP9.56□□□□□ -0.88
PAF1-208ENST00000598594 GTF3C3Q9Y5Q9 886 aa9.54□□□□□ -0.88
PAF1-208ENST00000598594 VSIG10Q8N0Z9 540 aa9.53□□□□□ -0.88
PAF1-208ENST00000598594 ERICH6Q7L0X2 663 aa9.5□□□□□ -0.89
PAF1-208ENST00000598594 RBM42Q9BTD8 480 aaKnown RBP9.5□□□□□ -0.89
PAF1-208ENST00000598594 MYCNP04198 464 aaPredicted RBP9.46□□□□□ -0.9
PAF1-208ENST00000598594 FOXD4L1Q9NU39 408 aa9.44□□□□□ -0.9
PAF1-208ENST00000598594 POLA2Q14181 598 aa9.34□□□□□ -0.91
PAF1-208ENST00000598594 PODXL2Q9NZ53 605 aa9.34□□□□□ -0.91
PAF1-208ENST00000598594 TMEM132AQ24JP5 1023 aa9.31□□□□□ -0.92
PAF1-208ENST00000598594 KDM2AQ9Y2K7 1162 aa9.31□□□□□ -0.92
PAF1-208ENST00000598594 CHRDL2Q6WN34 429 aa9.3□□□□□ -0.92
PAF1-208ENST00000598594 TTBK1Q5TCY1 1321 aaPredicted RBP9.3□□□□□ -0.92
PAF1-208ENST00000598594 PELP1Q8IZL8 1130 aaKnown RBP9.29□□□□□ -0.92
PAF1-208ENST00000598594 C14orf37Q86TY3 774 aa9.27□□□□□ -0.93
PAF1-208ENST00000598594 ZBTB12Q9Y330 459 aaPredicted RBP9.27□□□□□ -0.93
PAF1-208ENST00000598594 DCAF8L2P0C7V8 631 aa9.26□□□□□ -0.93
PAF1-208ENST00000598594 FBLN2P98095 1184 aa9.22□□□□□ -0.93
PAF1-208ENST00000598594 KLHL34Q8N239 644 aa9.2□□□□□ -0.94
PAF1-208ENST00000598594 AKT1S1Q96B36 256 aa9.2□□□□□ -0.94
PAF1-208ENST00000598594 MYT1Q01538 1121 aa9.17□□□□□ -0.94
PAF1-208ENST00000598594 NPM2Q86SE8 214 aaKnown RBP9.13□□□□□ -0.95
PAF1-208ENST00000598594 ATF5Q9Y2D1 282 aaPredicted RBP9.13□□□□□ -0.95
PAF1-208ENST00000598594 OSCARQ8IYS5 282 aa9.08□□□□□ -0.96
PAF1-208ENST00000598594 REM2Q8IYK8 340 aaPredicted RBP9.06□□□□□ -0.96
PAF1-208ENST00000598594 SP7Q8TDD2 431 aaPredicted RBP9.05□□□□□ -0.96
PAF1-208ENST00000598594 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.05□□□□□ -0.96
PAF1-208ENST00000598594 FBXO3Q9UK99 471 aa9.05□□□□□ -0.96
PAF1-208ENST00000598594 SUPT5HO00267 1087 aaKnown RBP9.04□□□□□ -0.96
PAF1-208ENST00000598594 NBR1Q14596 966 aa9.03□□□□□ -0.96
PAF1-208ENST00000598594 PAXIP1Q6ZW49 1069 aaPredicted RBP9.03□□□□□ -0.96
PAF1-208ENST00000598594 ATXN8OSP0DMR3 200 aa9.02□□□□□ -0.97
PAF1-208ENST00000598594 PIP4P2Q8N4L2 257 aa9.01□□□□□ -0.97
PAF1-208ENST00000598594 CFAP44Q96MT7 982 aa9.01□□□□□ -0.97
PAF1-208ENST00000598594 TRIM26Q12899 539 aaPredicted RBP8.99□□□□□ -0.97
PAF1-208ENST00000598594 BBXQ8WY36 941 aaPredicted RBP8.99□□□□□ -0.97
PAF1-208ENST00000598594 PITPNM1O00562 1244 aa8.97□□□□□ -0.97
PAF1-208ENST00000598594 FXR2P51116 673 aaKnown RBP eCLIP8.95□□□□□ -0.98
PAF1-208ENST00000598594 SPDYE2BA6NHP3 402 aa8.93□□□□□ -0.98
PAF1-208ENST00000598594 SPDYE6P0CI01 402 aa8.93□□□□□ -0.98
PAF1-208ENST00000598594 SPDYE2Q495Y8 402 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms