RNA–Protein interactions for RNA: ENST00000597823.1

LRMDA-213, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 4

Gene LRMDA, Length 606 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-213ENST00000597823 AEBP2Q6ZN18 517 aaPredicted RBP31.23■■■□□ 2.59
LRMDA-213ENST00000597823 CHIC1Q5VXU3 224 aa30.26■■■□□ 2.43
LRMDA-213ENST00000597823 SENP3Q9H4L4 574 aaPredicted RBP26.67■■□□□ 1.86
LRMDA-213ENST00000597823 PHF23Q9BUL5 403 aaPredicted RBP26.52■■□□□ 1.84
LRMDA-213ENST00000597823 FOXD1Q16676 465 aa24.72■■□□□ 1.55
LRMDA-213ENST00000597823 PLPPR3Q6T4P5 718 aa24.5■■□□□ 1.51
LRMDA-213ENST00000597823 ADRA2BP18089 450 aa23.51■■□□□ 1.35
LRMDA-213ENST00000597823 PPP6R1Q9UPN7 881 aa23.51■■□□□ 1.35
LRMDA-213ENST00000597823 PIAS4Q8N2W9 510 aaPredicted RBP23.3■■□□□ 1.32
LRMDA-213ENST00000597823 MSH5O43196 834 aa23.01■■□□□ 1.27
LRMDA-213ENST00000597823 SCAF1Q9H7N4 1312 aaKnown RBP21.64■■□□□ 1.05
LRMDA-213ENST00000597823 PPP4R3CPQ6ZMV5 832 aa21.52■■□□□ 1.04
LRMDA-213ENST00000597823 POTEDQ86YR6 584 aa21.44■■□□□ 1.02
LRMDA-213ENST00000597823 MAPK8IP2Q13387 824 aaPredicted RBP21.41■■□□□ 1.02
LRMDA-213ENST00000597823 DMRT2Q9Y5R5 561 aa21.2■□□□□ 0.98
LRMDA-213ENST00000597823 CNKSR2Q8WXI2 1034 aa21.01■□□□□ 0.95
LRMDA-213ENST00000597823 NCBP3Q53F19 620 aaKnown RBP20.95■□□□□ 0.94
LRMDA-213ENST00000597823 RNF216Q9NWF9 866 aaPredicted RBP20.65■□□□□ 0.9
LRMDA-213ENST00000597823 KCNA4P22459 653 aa20.62■□□□□ 0.89
LRMDA-213ENST00000597823 HOXD11P31277 338 aaPredicted RBP20.62■□□□□ 0.89
LRMDA-213ENST00000597823 NPM3O75607 178 aaKnown RBP20.53■□□□□ 0.88
LRMDA-213ENST00000597823 DCAF8L1A6NGE4 600 aa20.41■□□□□ 0.86
LRMDA-213ENST00000597823 DNAJC5BQ9UF47 199 aa19.93■□□□□ 0.78
LRMDA-213ENST00000597823 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.75■□□□□ 0.75
LRMDA-213ENST00000597823 SLC4A1APQ9BWU0 796 aaKnown RBP19.64■□□□□ 0.73
LRMDA-213ENST00000597823 RNF39Q9H2S5 420 aa19.62■□□□□ 0.73
LRMDA-213ENST00000597823 CACNB1Q02641 598 aaPredicted RBP19.43■□□□□ 0.7
LRMDA-213ENST00000597823 C1QBPQ07021 282 aaKnown RBP19.43■□□□□ 0.7
LRMDA-213ENST00000597823 SLC4A2P04920 1241 aa19.42■□□□□ 0.7
LRMDA-213ENST00000597823 U3KPZ7 1027 aaPredicted RBP19.29■□□□□ 0.68
LRMDA-213ENST00000597823 FOXD4L1Q9NU39 408 aa19.12■□□□□ 0.65
LRMDA-213ENST00000597823 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.07■□□□□ 0.64
LRMDA-213ENST00000597823 HNRNPUL2Q1KMD3 747 aaKnown RBP19.07■□□□□ 0.64
LRMDA-213ENST00000597823 MYCNP04198 464 aaPredicted RBP19.03■□□□□ 0.64
LRMDA-213ENST00000597823 APLP2Q06481 763 aa18.98■□□□□ 0.63
LRMDA-213ENST00000597823 SAMD1Q6SPF0 538 aaPredicted RBP18.96■□□□□ 0.63
LRMDA-213ENST00000597823 ZBTB22O15209 634 aa18.91■□□□□ 0.62
LRMDA-213ENST00000597823 CAPN15O75808 1086 aa18.89■□□□□ 0.61
LRMDA-213ENST00000597823 SPINK5Q9NQ38 1064 aaPredicted RBP18.86■□□□□ 0.61
LRMDA-213ENST00000597823 EHMT2Q96KQ7 1210 aa18.72■□□□□ 0.59
LRMDA-213ENST00000597823 TRHP20396 242 aaPredicted RBP18.71■□□□□ 0.59
LRMDA-213ENST00000597823 ZNF219Q9P2Y4 722 aaPredicted RBP18.7■□□□□ 0.58
LRMDA-213ENST00000597823 CSRNP3Q8WYN3 585 aa18.59■□□□□ 0.57
LRMDA-213ENST00000597823 DSG3P32926 999 aa18.57■□□□□ 0.56
LRMDA-213ENST00000597823 ATXN8OSP0DMR3 200 aa18.49■□□□□ 0.55
LRMDA-213ENST00000597823 ABCB7O75027 752 aa18.46■□□□□ 0.55
LRMDA-213ENST00000597823 ATF5Q9Y2D1 282 aaPredicted RBP18.45■□□□□ 0.54
LRMDA-213ENST00000597823 POLA2Q14181 598 aa18.31■□□□□ 0.52
LRMDA-213ENST00000597823 ZBTB12Q9Y330 459 aaPredicted RBP18.04■□□□□ 0.48
LRMDA-213ENST00000597823 FBLN2P98095 1184 aa17.85■□□□□ 0.45
LRMDA-213ENST00000597823 RBM42Q9BTD8 480 aaKnown RBP17.79■□□□□ 0.44
LRMDA-213ENST00000597823 OSCARQ8IYS5 282 aa17.68■□□□□ 0.42
LRMDA-213ENST00000597823 MKRN4PQ13434 485 aaPredicted RBP17.63■□□□□ 0.41
LRMDA-213ENST00000597823 SPDYE2BA6NHP3 402 aa17.49■□□□□ 0.39
LRMDA-213ENST00000597823 SPDYE6P0CI01 402 aa17.49■□□□□ 0.39
LRMDA-213ENST00000597823 SPDYE2Q495Y8 402 aa17.49■□□□□ 0.39
LRMDA-213ENST00000597823 AKT1S1Q96B36 256 aa17.47■□□□□ 0.39
LRMDA-213ENST00000597823 ZNF692Q9BU19 519 aaPredicted RBP17.4■□□□□ 0.38
LRMDA-213ENST00000597823 REM2Q8IYK8 340 aaPredicted RBP17.27■□□□□ 0.36
LRMDA-213ENST00000597823 SSUH2Q9Y2M2 353 aa17.26■□□□□ 0.35
LRMDA-213ENST00000597823 SPDYE4A6NLX3 237 aa17.18■□□□□ 0.34
LRMDA-213ENST00000597823 CHRDL2Q6WN34 429 aa17.13■□□□□ 0.33
LRMDA-213ENST00000597823 PABPN1Q86U42 306 aaKnown RBP eCLIP17.13■□□□□ 0.33
LRMDA-213ENST00000597823 SPDYE1Q8NFV5 336 aaPredicted RBP17.07■□□□□ 0.32
LRMDA-213ENST00000597823 PITPNM1O00562 1244 aa17.06■□□□□ 0.32
LRMDA-213ENST00000597823 CLEC11AQ9Y240 323 aa17.03■□□□□ 0.32
LRMDA-213ENST00000597823 POTEHQ6S545 545 aa16.95■□□□□ 0.3
LRMDA-213ENST00000597823 FKBP8Q14318 412 aa16.89■□□□□ 0.29
LRMDA-213ENST00000597823 STAG3Q9UJ98 1225 aa16.84■□□□□ 0.29
LRMDA-213ENST00000597823 PRR29P0C7W0 189 aa16.83■□□□□ 0.28
LRMDA-213ENST00000597823 PIP4P2Q8N4L2 257 aa16.82■□□□□ 0.28
LRMDA-213ENST00000597823 FXR2P51116 673 aaKnown RBP eCLIP16.8■□□□□ 0.28
LRMDA-213ENST00000597823 PROM2Q8N271 834 aa16.75■□□□□ 0.27
LRMDA-213ENST00000597823 PRKAR2AP13861 404 aaKnown RBP16.68■□□□□ 0.26
LRMDA-213ENST00000597823 CHADLQ6NUI6 762 aa16.58■□□□□ 0.24
LRMDA-213ENST00000597823 CREBZFQ9NS37 354 aa16.45■□□□□ 0.22
LRMDA-213ENST00000597823 HAX1O00165 279 aa16.44■□□□□ 0.22
LRMDA-213ENST00000597823 FBXO3Q9UK99 471 aa16.44■□□□□ 0.22
LRMDA-213ENST00000597823 FARP1Q9Y4F1 1045 aaPredicted RBP16.41■□□□□ 0.22
LRMDA-213ENST00000597823 PLEKHG5O94827 1062 aa16.4■□□□□ 0.22
LRMDA-213ENST00000597823 MIER1Q8N108 512 aa16.38■□□□□ 0.21
LRMDA-213ENST00000597823 PLCD3Q8N3E9 789 aa16.33■□□□□ 0.2
LRMDA-213ENST00000597823 NPM1P06748 294 aaKnown RBP eCLIP16.28■□□□□ 0.2
LRMDA-213ENST00000597823 C19orf67A6NJJ6 358 aa16.24■□□□□ 0.19
LRMDA-213ENST00000597823 MNX1P50219 401 aaPredicted RBP16.2■□□□□ 0.18
LRMDA-213ENST00000597823 CD44P16070 742 aaKnown RBP16.18■□□□□ 0.18
LRMDA-213ENST00000597823 ZBTB47Q9UFB7 747 aaPredicted RBP16.18■□□□□ 0.18
LRMDA-213ENST00000597823 VASPP50552 380 aaPredicted RBP16.15■□□□□ 0.18
LRMDA-213ENST00000597823 EVX2Q03828 476 aa16.15■□□□□ 0.18
LRMDA-213ENST00000597823 SP7Q8TDD2 431 aaPredicted RBP16.15■□□□□ 0.18
LRMDA-213ENST00000597823 PAK3O75914 559 aaPredicted RBP16.12■□□□□ 0.17
LRMDA-213ENST00000597823 ZRANB1Q9UGI0 708 aa16.06■□□□□ 0.16
LRMDA-213ENST00000597823 KLHL34Q8N239 644 aa16.04■□□□□ 0.16
LRMDA-213ENST00000597823 TSPYL2Q9H2G4 693 aaPredicted RBP15.97■□□□□ 0.15
LRMDA-213ENST00000597823 ZNF579Q8NAF0 562 aaKnown RBP15.93■□□□□ 0.14
LRMDA-213ENST00000597823 CLCN6P51797 869 aa15.91■□□□□ 0.14
LRMDA-213ENST00000597823 RASEFQ8IZ41 740 aa15.9■□□□□ 0.14
LRMDA-213ENST00000597823 GABBR2O75899 941 aa15.89■□□□□ 0.13
LRMDA-213ENST00000597823 NUBP1P53384 320 aa15.89■□□□□ 0.13
LRMDA-213ENST00000597823 IFNLR1Q8IU57 520 aaPredicted RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms