RNA–Protein interactions for RNA: ENST00000593404.5

SMIM7-210, Transcript of small integral membrane protein 7, humanhuman

TSL 2

Gene SMIM7, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM7-210ENST00000593404 AEBP2Q6ZN18 517 aaPredicted RBP17.59■□□□□ 0.41
SMIM7-210ENST00000593404 CHIC1Q5VXU3 224 aa17.37■□□□□ 0.37
SMIM7-210ENST00000593404 PHF23Q9BUL5 403 aaPredicted RBP15.28■□□□□ 0.04
SMIM7-210ENST00000593404 SENP3Q9H4L4 574 aaPredicted RBP14.95□□□□□ -0.02
SMIM7-210ENST00000593404 PLPPR3Q6T4P5 718 aa14.2□□□□□ -0.14
SMIM7-210ENST00000593404 FOXD1Q16676 465 aa13.82□□□□□ -0.2
SMIM7-210ENST00000593404 ADRA2BP18089 450 aa13.42□□□□□ -0.26
SMIM7-210ENST00000593404 PPP6R1Q9UPN7 881 aa13.42□□□□□ -0.26
SMIM7-210ENST00000593404 PIAS4Q8N2W9 510 aaPredicted RBP13.09□□□□□ -0.31
SMIM7-210ENST00000593404 POTEDQ86YR6 584 aa12.73□□□□□ -0.37
SMIM7-210ENST00000593404 MSH5O43196 834 aa12.72□□□□□ -0.37
SMIM7-210ENST00000593404 DNAJC5BQ9UF47 199 aa12.65□□□□□ -0.38
SMIM7-210ENST00000593404 PPP4R3CPQ6ZMV5 832 aa12.52□□□□□ -0.41
SMIM7-210ENST00000593404 KCNA4P22459 653 aa12.39□□□□□ -0.43
SMIM7-210ENST00000593404 ABCC9O60706 1549 aa12.38□□□□□ -0.43
SMIM7-210ENST00000593404 SCAF1Q9H7N4 1312 aaKnown RBP12.33□□□□□ -0.44
SMIM7-210ENST00000593404 NISCHQ9Y2I1 1504 aa12.27□□□□□ -0.44
SMIM7-210ENST00000593404 NCBP3Q53F19 620 aaKnown RBP12.26□□□□□ -0.45
SMIM7-210ENST00000593404 DNAJC5Q9H3Z4 198 aa12.26□□□□□ -0.45
SMIM7-210ENST00000593404 CNKSR2Q8WXI2 1034 aa12.15□□□□□ -0.46
SMIM7-210ENST00000593404 MAPK8IP2Q13387 824 aaPredicted RBP12.12□□□□□ -0.47
SMIM7-210ENST00000593404 NPM3O75607 178 aaKnown RBP12.05□□□□□ -0.48
SMIM7-210ENST00000593404 DMRT2Q9Y5R5 561 aa11.95□□□□□ -0.5
SMIM7-210ENST00000593404 RNF216Q9NWF9 866 aaPredicted RBP11.86□□□□□ -0.51
SMIM7-210ENST00000593404 SLC4A1APQ9BWU0 796 aaKnown RBP11.85□□□□□ -0.51
SMIM7-210ENST00000593404 HOXD11P31277 338 aaPredicted RBP11.77□□□□□ -0.53
SMIM7-210ENST00000593404 EHMT2Q96KQ7 1210 aa11.67□□□□□ -0.54
SMIM7-210ENST00000593404 CSRNP3Q8WYN3 585 aa11.48□□□□□ -0.57
SMIM7-210ENST00000593404 CCDC180Q9P1Z9 1646 aa11.44□□□□□ -0.58
SMIM7-210ENST00000593404 DCAF8L1A6NGE4 600 aa11.41□□□□□ -0.58
SMIM7-210ENST00000593404 ZBTB22O15209 634 aa11.39□□□□□ -0.59
SMIM7-210ENST00000593404 PABPN1Q86U42 306 aaKnown RBP eCLIP11.39□□□□□ -0.59
SMIM7-210ENST00000593404 FOXD4L1Q9NU39 408 aa11.38□□□□□ -0.59
SMIM7-210ENST00000593404 SLC4A2P04920 1241 aa11.33□□□□□ -0.6
SMIM7-210ENST00000593404 RB1CC1Q8TDY2 1594 aa11.33□□□□□ -0.6
SMIM7-210ENST00000593404 CECR2Q9BXF3 1484 aa11.25□□□□□ -0.61
SMIM7-210ENST00000593404 UNC13AQ9UPW8 1703 aa11.23□□□□□ -0.61
SMIM7-210ENST00000593404 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.22□□□□□ -0.619e-6■■■□□ 18.9
SMIM7-210ENST00000593404 TRIM41Q8WV44 630 aa11.21□□□□□ -0.61
SMIM7-210ENST00000593404 CC2D2AQ9P2K1 1620 aa11.17□□□□□ -0.62
SMIM7-210ENST00000593404 BICRAQ9NZM4 1560 aa11.17□□□□□ -0.62
SMIM7-210ENST00000593404 MYCNP04198 464 aaPredicted RBP11.15□□□□□ -0.62
SMIM7-210ENST00000593404 CUX2O14529 1486 aa11.05□□□□□ -0.64
SMIM7-210ENST00000593404 U3KPZ7 1027 aaPredicted RBP11.03□□□□□ -0.64
SMIM7-210ENST00000593404 NACADO15069 1562 aa11.03□□□□□ -0.64
SMIM7-210ENST00000593404 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11□□□□□ -0.65
SMIM7-210ENST00000593404 HNRNPUL2Q1KMD3 747 aaKnown RBP11□□□□□ -0.65
SMIM7-210ENST00000593404 ATXN8OSP0DMR3 200 aa10.99□□□□□ -0.65
SMIM7-210ENST00000593404 SAMD1Q6SPF0 538 aaPredicted RBP10.96□□□□□ -0.65
SMIM7-210ENST00000593404 RNF39Q9H2S5 420 aa10.89□□□□□ -0.67
SMIM7-210ENST00000593404 EIF4G1Q04637 1599 aaKnown RBP10.89□□□□□ -0.67
SMIM7-210ENST00000593404 APLP2Q06481 763 aa10.86□□□□□ -0.67
SMIM7-210ENST00000593404 C1QBPQ07021 282 aaKnown RBP10.8□□□□□ -0.68
SMIM7-210ENST00000593404 ATF5Q9Y2D1 282 aaPredicted RBP10.8□□□□□ -0.68
SMIM7-210ENST00000593404 SLC24A1O60721 1099 aa10.78□□□□□ -0.68
SMIM7-210ENST00000593404 SHROOM4Q9ULL8 1493 aa10.76□□□□□ -0.69
SMIM7-210ENST00000593404 CACNB1Q02641 598 aaPredicted RBP10.76□□□□□ -0.69
SMIM7-210ENST00000593404 DCAF8L2P0C7V8 631 aa10.69□□□□□ -0.7
SMIM7-210ENST00000593404 ERCC6Q03468 1493 aa10.68□□□□□ -0.7
SMIM7-210ENST00000593404 SPINK5Q9NQ38 1064 aaPredicted RBP10.67□□□□□ -0.7
SMIM7-210ENST00000593404 ILDR1Q86SU0 546 aaPredicted RBP10.65□□□□□ -0.7
SMIM7-210ENST00000593404 ZNF219Q9P2Y4 722 aaPredicted RBP10.65□□□□□ -0.7
SMIM7-210ENST00000593404 CAPN15O75808 1086 aa10.64□□□□□ -0.71
SMIM7-210ENST00000593404 TRHP20396 242 aaPredicted RBP10.62□□□□□ -0.71
SMIM7-210ENST00000593404 MYO15BQ96JP2 1530 aa10.57□□□□□ -0.72
SMIM7-210ENST00000593404 THOC2Q8NI27 1593 aaKnown RBP10.49□□□□□ -0.73
SMIM7-210ENST00000593404 POLA2Q14181 598 aa10.49□□□□□ -0.73
SMIM7-210ENST00000593404 ABCB7O75027 752 aa10.43□□□□□ -0.74
SMIM7-210ENST00000593404 RIMBP3CA6NJZ7 1639 aa10.43□□□□□ -0.74
SMIM7-210ENST00000593404 RIMBP3BA6NNM3 1639 aa10.43□□□□□ -0.74
SMIM7-210ENST00000593404 RIMBP3Q9UFD9 1639 aa10.43□□□□□ -0.74
SMIM7-210ENST00000593404 DSG3P32926 999 aa10.42□□□□□ -0.74
SMIM7-210ENST00000593404 NESP48681 1621 aa10.41□□□□□ -0.74
SMIM7-210ENST00000593404 OSCARQ8IYS5 282 aa10.39□□□□□ -0.75
SMIM7-210ENST00000593404 FBLN2P98095 1184 aa10.38□□□□□ -0.75
SMIM7-210ENST00000593404 SCRIBQ14160 1630 aa10.37□□□□□ -0.75
SMIM7-210ENST00000593404 FKBP8Q14318 412 aa10.37□□□□□ -0.75
SMIM7-210ENST00000593404 BAZ1AQ9NRL2 1556 aaPredicted RBP10.37□□□□□ -0.75
SMIM7-210ENST00000593404 ZBTB12Q9Y330 459 aaPredicted RBP10.37□□□□□ -0.75
SMIM7-210ENST00000593404 MKRN4PQ13434 485 aaPredicted RBP10.35□□□□□ -0.75
SMIM7-210ENST00000593404 ARHGEF11O15085 1522 aa10.26□□□□□ -0.77
SMIM7-210ENST00000593404 KIF21AQ7Z4S6 1674 aa10.25□□□□□ -0.77
SMIM7-210ENST00000593404 SMARCA2P51531 1590 aa10.25□□□□□ -0.77
SMIM7-210ENST00000593404 NCAPD3P42695 1498 aa10.23□□□□□ -0.77
SMIM7-210ENST00000593404 SPDYE4A6NLX3 237 aa10.22□□□□□ -0.77
SMIM7-210ENST00000593404 CYB5RLQ6IPT4 315 aa10.22□□□□□ -0.77
SMIM7-210ENST00000593404 LAMC3Q9Y6N6 1575 aa10.12□□□□□ -0.79
SMIM7-210ENST00000593404 ARAP1Q96P48 1450 aa10.1□□□□□ -0.79
SMIM7-210ENST00000593404 SPDYE2BA6NHP3 402 aa10.09□□□□□ -0.79
SMIM7-210ENST00000593404 SPDYE6P0CI01 402 aa10.09□□□□□ -0.79
SMIM7-210ENST00000593404 SPDYE2Q495Y8 402 aa10.09□□□□□ -0.79
SMIM7-210ENST00000593404 WDR62O43379 1518 aa10.08□□□□□ -0.8
SMIM7-210ENST00000593404 PROM2Q8N271 834 aa10.07□□□□□ -0.8
SMIM7-210ENST00000593404 DCAF1Q9Y4B6 1507 aa10.07□□□□□ -0.8
SMIM7-210ENST00000593404 ZNF692Q9BU19 519 aaPredicted RBP10.06□□□□□ -0.8
SMIM7-210ENST00000593404 MRC2Q9UBG0 1479 aa10.04□□□□□ -0.8
SMIM7-210ENST00000593404 ATAD2BQ9ULI0 1458 aa10.04□□□□□ -0.8
SMIM7-210ENST00000593404 PDS5BQ9NTI5 1447 aa10.04□□□□□ -0.8
SMIM7-210ENST00000593404 HMGXB3Q12766 1538 aa10.02□□□□□ -0.8
SMIM7-210ENST00000593404 SSUH2Q9Y2M2 353 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms