RNA–Protein interactions for RNA: ENST00000593140.1

AC011478.1-201, humanhuman

TSL 4 BASIC

Gene AC011478.1, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011478.1-201ENST00000593140 AEBP2Q6ZN18 517 aaPredicted RBP38.02■■■■□ 3.68
AC011478.1-201ENST00000593140 CHIC1Q5VXU3 224 aa36.99■■■■□ 3.51
AC011478.1-201ENST00000593140 PHF23Q9BUL5 403 aaPredicted RBP32.53■■■□□ 2.8
AC011478.1-201ENST00000593140 SENP3Q9H4L4 574 aaPredicted RBP32.28■■■□□ 2.76
AC011478.1-201ENST00000593140 PLPPR3Q6T4P5 718 aa29.99■■■□□ 2.39
AC011478.1-201ENST00000593140 FOXD1Q16676 465 aa29.98■■■□□ 2.39
AC011478.1-201ENST00000593140 PPP6R1Q9UPN7 881 aa28.76■■■□□ 2.19
AC011478.1-201ENST00000593140 ADRA2BP18089 450 aa28.73■■■□□ 2.19
AC011478.1-201ENST00000593140 PIAS4Q8N2W9 510 aaPredicted RBP28.26■■■□□ 2.11
AC011478.1-201ENST00000593140 MSH5O43196 834 aa27.69■■■□□ 2.02
AC011478.1-201ENST00000593140 PPP4R3CPQ6ZMV5 832 aa26.42■■□□□ 1.82
AC011478.1-201ENST00000593140 SCAF1Q9H7N4 1312 aaKnown RBP26.28■■□□□ 1.8
AC011478.1-201ENST00000593140 MAPK8IP2Q13387 824 aaPredicted RBP26.12■■□□□ 1.77
AC011478.1-201ENST00000593140 DMRT2Q9Y5R5 561 aa25.74■■□□□ 1.71
AC011478.1-201ENST00000593140 CNKSR2Q8WXI2 1034 aa25.7■■□□□ 1.7
AC011478.1-201ENST00000593140 NCBP3Q53F19 620 aaKnown RBP25.68■■□□□ 1.7
AC011478.1-201ENST00000593140 KCNA4P22459 653 aa25.66■■□□□ 1.7
AC011478.1-201ENST00000593140 POTEDQ86YR6 584 aa25.46■■□□□ 1.67
AC011478.1-201ENST00000593140 NPM3O75607 178 aaKnown RBP25.31■■□□□ 1.64
AC011478.1-201ENST00000593140 RNF216Q9NWF9 866 aaPredicted RBP25.22■■□□□ 1.63
AC011478.1-201ENST00000593140 HOXD11P31277 338 aaPredicted RBP25.16■■□□□ 1.62
AC011478.1-201ENST00000593140 DCAF8L1A6NGE4 600 aa24.69■■□□□ 1.54
AC011478.1-201ENST00000593140 DNAJC5BQ9UF47 199 aa24.54■■□□□ 1.52
AC011478.1-201ENST00000593140 SLC4A1APQ9BWU0 796 aaKnown RBP24.41■■□□□ 1.5
AC011478.1-201ENST00000593140 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.01■■□□□ 1.43
AC011478.1-201ENST00000593140 SLC4A2P04920 1241 aa23.93■■□□□ 1.42
AC011478.1-201ENST00000593140 RNF39Q9H2S5 420 aa23.72■■□□□ 1.39
AC011478.1-201ENST00000593140 FOXD4L1Q9NU39 408 aa23.64■■□□□ 1.37
AC011478.1-201ENST00000593140 ZBTB22O15209 634 aa23.61■■□□□ 1.37
AC011478.1-201ENST00000593140 EHMT2Q96KQ7 1210 aa23.59■■□□□ 1.37
AC011478.1-201ENST00000593140 U3KPZ7 1027 aaPredicted RBP23.58■■□□□ 1.37
AC011478.1-201ENST00000593140 C1QBPQ07021 282 aaKnown RBP23.43■■□□□ 1.34
AC011478.1-201ENST00000593140 MYCNP04198 464 aaPredicted RBP23.38■■□□□ 1.33
AC011478.1-201ENST00000593140 CSRNP3Q8WYN3 585 aa23.36■■□□□ 1.33
AC011478.1-201ENST00000593140 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.23■■□□□ 1.31
AC011478.1-201ENST00000593140 CACNB1Q02641 598 aaPredicted RBP23.23■■□□□ 1.31
AC011478.1-201ENST00000593140 HNRNPUL2Q1KMD3 747 aaKnown RBP23.23■■□□□ 1.31
AC011478.1-201ENST00000593140 SAMD1Q6SPF0 538 aaPredicted RBP23.15■■□□□ 1.3
AC011478.1-201ENST00000593140 APLP2Q06481 763 aa23.02■■□□□ 1.28
AC011478.1-201ENST00000593140 SPINK5Q9NQ38 1064 aaPredicted RBP22.98■■□□□ 1.27
AC011478.1-201ENST00000593140 CAPN15O75808 1086 aa22.9■■□□□ 1.26
AC011478.1-201ENST00000593140 ATXN8OSP0DMR3 200 aa22.82■■□□□ 1.24
AC011478.1-201ENST00000593140 ATF5Q9Y2D1 282 aaPredicted RBP22.79■■□□□ 1.24
AC011478.1-201ENST00000593140 TRHP20396 242 aaPredicted RBP22.77■■□□□ 1.24
AC011478.1-201ENST00000593140 ZNF219Q9P2Y4 722 aaPredicted RBP22.73■■□□□ 1.23
AC011478.1-201ENST00000593140 DSG3P32926 999 aa22.53■■□□□ 1.2
AC011478.1-201ENST00000593140 ABCB7O75027 752 aa22.47■■□□□ 1.19
AC011478.1-201ENST00000593140 POLA2Q14181 598 aa22.37■■□□□ 1.17
AC011478.1-201ENST00000593140 ZBTB12Q9Y330 459 aaPredicted RBP21.96■■□□□ 1.11
AC011478.1-201ENST00000593140 FBLN2P98095 1184 aa21.83■■□□□ 1.09
AC011478.1-201ENST00000593140 MKRN4PQ13434 485 aaPredicted RBP21.78■■□□□ 1.08
AC011478.1-201ENST00000593140 OSCARQ8IYS5 282 aa21.6■■□□□ 1.05
AC011478.1-201ENST00000593140 RBM42Q9BTD8 480 aaKnown RBP21.47■■□□□ 1.03
AC011478.1-201ENST00000593140 SPDYE2BA6NHP3 402 aa21.35■■□□□ 1.01
AC011478.1-201ENST00000593140 SPDYE6P0CI01 402 aa21.35■■□□□ 1.01
AC011478.1-201ENST00000593140 SPDYE2Q495Y8 402 aa21.35■■□□□ 1.01
AC011478.1-201ENST00000593140 ZNF692Q9BU19 519 aaPredicted RBP21.28■■□□□ 1
AC011478.1-201ENST00000593140 SPDYE4A6NLX3 237 aa21.23■□□□□ 0.99
AC011478.1-201ENST00000593140 AKT1S1Q96B36 256 aa21.17■□□□□ 0.98
AC011478.1-201ENST00000593140 SSUH2Q9Y2M2 353 aa21.17■□□□□ 0.98
AC011478.1-201ENST00000593140 FKBP8Q14318 412 aa21.14■□□□□ 0.97
AC011478.1-201ENST00000593140 PABPN1Q86U42 306 aaKnown RBP eCLIP20.99■□□□□ 0.95
AC011478.1-201ENST00000593140 REM2Q8IYK8 340 aaPredicted RBP20.99■□□□□ 0.95
AC011478.1-201ENST00000593140 PROM2Q8N271 834 aa20.83■□□□□ 0.93
AC011478.1-201ENST00000593140 SPDYE1Q8NFV5 336 aaPredicted RBP20.76■□□□□ 0.91
AC011478.1-201ENST00000593140 PITPNM1O00562 1244 aa20.75■□□□□ 0.91
AC011478.1-201ENST00000593140 CLEC11AQ9Y240 323 aa20.71■□□□□ 0.91
AC011478.1-201ENST00000593140 CHRDL2Q6WN34 429 aa20.64■□□□□ 0.89
AC011478.1-201ENST00000593140 STAG3Q9UJ98 1225 aa20.6■□□□□ 0.89
AC011478.1-201ENST00000593140 PRR29P0C7W0 189 aa20.49■□□□□ 0.87
AC011478.1-201ENST00000593140 FBXO3Q9UK99 471 aa20.41■□□□□ 0.86
AC011478.1-201ENST00000593140 FXR2P51116 673 aaKnown RBP eCLIP20.37■□□□□ 0.85
AC011478.1-201ENST00000593140 PIP4P2Q8N4L2 257 aa20.36■□□□□ 0.85
AC011478.1-201ENST00000593140 PRKAR2AP13861 404 aaKnown RBP20.24■□□□□ 0.83
AC011478.1-201ENST00000593140 CHADLQ6NUI6 762 aa20.22■□□□□ 0.83
AC011478.1-201ENST00000593140 CREBZFQ9NS37 354 aa20.18■□□□□ 0.82
AC011478.1-201ENST00000593140 MIER1Q8N108 512 aa20.17■□□□□ 0.82
AC011478.1-201ENST00000593140 POTEHQ6S545 545 aa20.15■□□□□ 0.82
AC011478.1-201ENST00000593140 VASPP50552 380 aaPredicted RBP20.13■□□□□ 0.81
AC011478.1-201ENST00000593140 PLCD3Q8N3E9 789 aa20.12■□□□□ 0.81
AC011478.1-201ENST00000593140 PLEKHG5O94827 1062 aa20.07■□□□□ 0.8
AC011478.1-201ENST00000593140 FARP1Q9Y4F1 1045 aaPredicted RBP20■□□□□ 0.79
AC011478.1-201ENST00000593140 MNX1P50219 401 aaPredicted RBP19.95■□□□□ 0.78
AC011478.1-201ENST00000593140 ZBTB47Q9UFB7 747 aaPredicted RBP19.88■□□□□ 0.77
AC011478.1-201ENST00000593140 IFNLR1Q8IU57 520 aaPredicted RBP19.86■□□□□ 0.77
AC011478.1-201ENST00000593140 NPM1P06748 294 aaKnown RBP eCLIP19.85■□□□□ 0.77
AC011478.1-201ENST00000593140 KLHL34Q8N239 644 aa19.85■□□□□ 0.77
AC011478.1-201ENST00000593140 HAX1O00165 279 aa19.75■□□□□ 0.75
AC011478.1-201ENST00000593140 C19orf67A6NJJ6 358 aa19.68■□□□□ 0.74
AC011478.1-201ENST00000593140 CD44P16070 742 aaKnown RBP19.64■□□□□ 0.73
AC011478.1-201ENST00000593140 NUBP1P53384 320 aa19.64■□□□□ 0.73
AC011478.1-201ENST00000593140 SPOCK2Q92563 424 aa19.64■□□□□ 0.73
AC011478.1-201ENST00000593140 RASEFQ8IZ41 740 aa19.61■□□□□ 0.73
AC011478.1-201ENST00000593140 EVX2Q03828 476 aa19.57■□□□□ 0.72
AC011478.1-201ENST00000593140 PAK3O75914 559 aaPredicted RBP19.55■□□□□ 0.72
AC011478.1-201ENST00000593140 TSPYL2Q9H2G4 693 aaPredicted RBP19.54■□□□□ 0.72
AC011478.1-201ENST00000593140 ZRANB1Q9UGI0 708 aa19.52■□□□□ 0.72
AC011478.1-201ENST00000593140 FAM212AQ96EL1 285 aa19.5■□□□□ 0.71
AC011478.1-201ENST00000593140 DCAF8Q5TAQ9 597 aa19.47■□□□□ 0.71
AC011478.1-201ENST00000593140 GSE1Q14687 1217 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms