RNA–Protein interactions for RNA: ENST00000591901.5

PTPN2-213, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 2

Gene PTPN2, Length 743 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-213ENST00000591901 AEBP2Q6ZN18 517 aaPredicted RBP25.71■■□□□ 1.71
PTPN2-213ENST00000591901 CHIC1Q5VXU3 224 aa24.29■■□□□ 1.48
PTPN2-213ENST00000591901 SENP3Q9H4L4 574 aaPredicted RBP22.19■■□□□ 1.14
PTPN2-213ENST00000591901 PHF23Q9BUL5 403 aaPredicted RBP21.8■■□□□ 1.08
PTPN2-213ENST00000591901 FOXD1Q16676 465 aa20.59■□□□□ 0.89
PTPN2-213ENST00000591901 POTEDQ86YR6 584 aa19.97■□□□□ 0.79
PTPN2-213ENST00000591901 MSH5O43196 834 aa19.55■□□□□ 0.72
PTPN2-213ENST00000591901 PLPPR3Q6T4P5 718 aa19.35■□□□□ 0.69
PTPN2-213ENST00000591901 PIAS4Q8N2W9 510 aaPredicted RBP19.26■□□□□ 0.67
PTPN2-213ENST00000591901 PPP6R1Q9UPN7 881 aa18.96■□□□□ 0.63
PTPN2-213ENST00000591901 ADRA2BP18089 450 aa18.94■□□□□ 0.62
PTPN2-213ENST00000591901 SCAF1Q9H7N4 1312 aaKnown RBP17.58■□□□□ 0.4
PTPN2-213ENST00000591901 DMRT2Q9Y5R5 561 aa17.48■□□□□ 0.39
PTPN2-213ENST00000591901 MAPK8IP2Q13387 824 aaPredicted RBP17.45■□□□□ 0.38
PTPN2-213ENST00000591901 CACNB1Q02641 598 aaPredicted RBP16.96■□□□□ 0.31
PTPN2-213ENST00000591901 DCAF8L1A6NGE4 600 aa16.91■□□□□ 0.3
PTPN2-213ENST00000591901 PPP4R3CPQ6ZMV5 832 aa16.86■□□□□ 0.29
PTPN2-213ENST00000591901 HOXD11P31277 338 aaPredicted RBP16.72■□□□□ 0.27
PTPN2-213ENST00000591901 CNKSR2Q8WXI2 1034 aa16.67■□□□□ 0.26
PTPN2-213ENST00000591901 RNF216Q9NWF9 866 aaPredicted RBP16.57■□□□□ 0.24
PTPN2-213ENST00000591901 RNF39Q9H2S5 420 aa16.53■□□□□ 0.24
PTPN2-213ENST00000591901 C1QBPQ07021 282 aaKnown RBP16.37■□□□□ 0.21
PTPN2-213ENST00000591901 NCBP3Q53F19 620 aaKnown RBP16.27■□□□□ 0.2
PTPN2-213ENST00000591901 DNAJC5BQ9UF47 199 aa16.27■□□□□ 0.2
PTPN2-213ENST00000591901 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.05■□□□□ 0.162e-6■■□□□ 11.9
PTPN2-213ENST00000591901 NPM3O75607 178 aaKnown RBP15.84■□□□□ 0.13
PTPN2-213ENST00000591901 U3KPZ7 1027 aaPredicted RBP15.53■□□□□ 0.08
PTPN2-213ENST00000591901 CAPN15O75808 1086 aa15.52■□□□□ 0.08
PTPN2-213ENST00000591901 POTEHQ6S545 545 aa15.45■□□□□ 0.06
PTPN2-213ENST00000591901 DSG3P32926 999 aa15.39■□□□□ 0.05
PTPN2-213ENST00000591901 SPINK5Q9NQ38 1064 aaPredicted RBP15.38■□□□□ 0.05
PTPN2-213ENST00000591901 KCNA4P22459 653 aa15.36■□□□□ 0.05
PTPN2-213ENST00000591901 APLP2Q06481 763 aa15.35■□□□□ 0.05
PTPN2-213ENST00000591901 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.21■□□□□ 0.03
PTPN2-213ENST00000591901 HNRNPUL2Q1KMD3 747 aaKnown RBP15.21■□□□□ 0.03
PTPN2-213ENST00000591901 ZNF219Q9P2Y4 722 aaPredicted RBP15.19■□□□□ 0.02
PTPN2-213ENST00000591901 TRHP20396 242 aaPredicted RBP15.18■□□□□ 0.02
PTPN2-213ENST00000591901 SLC4A2P04920 1241 aa15.14■□□□□ 0.01
PTPN2-213ENST00000591901 ABCB7O75027 752 aa15.05■□□□□ -0
PTPN2-213ENST00000591901 SAMD1Q6SPF0 538 aaPredicted RBP15.05■□□□□ -0
PTPN2-213ENST00000591901 RBM42Q9BTD8 480 aaKnown RBP14.86□□□□□ -0.03
PTPN2-213ENST00000591901 MYCNP04198 464 aaPredicted RBP14.76□□□□□ -0.05
PTPN2-213ENST00000591901 POLA2Q14181 598 aa14.68□□□□□ -0.06
PTPN2-213ENST00000591901 SLC4A1APQ9BWU0 796 aaKnown RBP14.56□□□□□ -0.08
PTPN2-213ENST00000591901 CHRDL2Q6WN34 429 aa14.54□□□□□ -0.08
PTPN2-213ENST00000591901 ZBTB12Q9Y330 459 aaPredicted RBP14.48□□□□□ -0.09
PTPN2-213ENST00000591901 FOXD4L1Q9NU39 408 aa14.42□□□□□ -0.1
PTPN2-213ENST00000591901 AKT1S1Q96B36 256 aa14.39□□□□□ -0.11
PTPN2-213ENST00000591901 ATF5Q9Y2D1 282 aaPredicted RBP14.26□□□□□ -0.13
PTPN2-213ENST00000591901 REM2Q8IYK8 340 aaPredicted RBP14.19□□□□□ -0.14
PTPN2-213ENST00000591901 OSCARQ8IYS5 282 aa14.17□□□□□ -0.14
PTPN2-213ENST00000591901 SP7Q8TDD2 431 aaPredicted RBP14.15□□□□□ -0.14
PTPN2-213ENST00000591901 ZBTB22O15209 634 aa14.14□□□□□ -0.15
PTPN2-213ENST00000591901 PIP4P2Q8N4L2 257 aa14.09□□□□□ -0.15
PTPN2-213ENST00000591901 ATXN8OSP0DMR3 200 aa14.04□□□□□ -0.16
PTPN2-213ENST00000591901 HAX1O00165 279 aa14.03□□□□□ -0.16
PTPN2-213ENST00000591901 PITPNM1O00562 1244 aa14.01□□□□□ -0.17
PTPN2-213ENST00000591901 FBLN2P98095 1184 aa13.99□□□□□ -0.17
PTPN2-213ENST00000591901 FXR2P51116 673 aaKnown RBP eCLIP13.97□□□□□ -0.17
PTPN2-213ENST00000591901 SPDYE2BA6NHP3 402 aa13.93□□□□□ -0.18
PTPN2-213ENST00000591901 SPDYE6P0CI01 402 aa13.93□□□□□ -0.18
PTPN2-213ENST00000591901 SPDYE2Q495Y8 402 aa13.93□□□□□ -0.18
PTPN2-213ENST00000591901 CSRNP3Q8WYN3 585 aa13.84□□□□□ -0.19
PTPN2-213ENST00000591901 EHMT2Q96KQ7 1210 aa13.84□□□□□ -0.19
PTPN2-213ENST00000591901 SPDYE1Q8NFV5 336 aaPredicted RBP13.79□□□□□ -0.2
PTPN2-213ENST00000591901 CLEC11AQ9Y240 323 aa13.78□□□□□ -0.2
PTPN2-213ENST00000591901 ZNF692Q9BU19 519 aaPredicted RBP13.73□□□□□ -0.21
PTPN2-213ENST00000591901 PRKAR2AP13861 404 aaKnown RBP13.71□□□□□ -0.21
PTPN2-213ENST00000591901 EVX2Q03828 476 aa13.61□□□□□ -0.23
PTPN2-213ENST00000591901 SSUH2Q9Y2M2 353 aa13.61□□□□□ -0.23
PTPN2-213ENST00000591901 MKRN4PQ13434 485 aaPredicted RBP13.6□□□□□ -0.23
PTPN2-213ENST00000591901 PRR29P0C7W0 189 aa13.53□□□□□ -0.24
PTPN2-213ENST00000591901 C19orf67A6NJJ6 358 aa13.52□□□□□ -0.25
PTPN2-213ENST00000591901 PABPN1Q86U42 306 aaKnown RBP eCLIP13.47□□□□□ -0.25
PTPN2-213ENST00000591901 CHADLQ6NUI6 762 aa13.44□□□□□ -0.26
PTPN2-213ENST00000591901 GABBR2O75899 941 aa13.41□□□□□ -0.26
PTPN2-213ENST00000591901 LHX8Q68G74 356 aa13.29□□□□□ -0.28
PTPN2-213ENST00000591901 CLCN6P51797 869 aa13.28□□□□□ -0.28
PTPN2-213ENST00000591901 CD44P16070 742 aaKnown RBP13.27□□□□□ -0.29
PTPN2-213ENST00000591901 FARP1Q9Y4F1 1045 aaPredicted RBP13.25□□□□□ -0.29
PTPN2-213ENST00000591901 PLSCR2Q9NRY7 297 aa13.2□□□□□ -0.3
PTPN2-213ENST00000591901 STAG3Q9UJ98 1225 aa13.17□□□□□ -0.3
PTPN2-213ENST00000591901 DCBLD2Q96PD2 775 aa13.12□□□□□ -0.31
PTPN2-213ENST00000591901 ZRANB1Q9UGI0 708 aa13.05□□□□□ -0.32
PTPN2-213ENST00000591901 PAK3O75914 559 aaPredicted RBP13.02□□□□□ -0.33
PTPN2-213ENST00000591901 POTEIP0CG38 1075 aa13.01□□□□□ -0.33
PTPN2-213ENST00000591901 ZNF579Q8NAF0 562 aaKnown RBP13.01□□□□□ -0.33
PTPN2-213ENST00000591901 CREBZFQ9NS37 354 aa12.97□□□□□ -0.33
PTPN2-213ENST00000591901 SPDYE4A6NLX3 237 aa12.96□□□□□ -0.33
PTPN2-213ENST00000591901 NPM1P06748 294 aaKnown RBP eCLIP12.92□□□□□ -0.34
PTPN2-213ENST00000591901 GALR2O43603 387 aaPredicted RBP12.83□□□□□ -0.36
PTPN2-213ENST00000591901 PHF12Q96QT6 1004 aa12.75□□□□□ -0.37
PTPN2-213ENST00000591901 MNX1P50219 401 aaPredicted RBP12.65□□□□□ -0.38
PTPN2-213ENST00000591901 OTUD5Q96G74 571 aa12.65□□□□□ -0.38
PTPN2-213ENST00000591901 PLEKHG5O94827 1062 aa12.63□□□□□ -0.39
PTPN2-213ENST00000591901 SLC39A7Q92504 469 aa12.61□□□□□ -0.39
PTPN2-213ENST00000591901 C7P10643 843 aa12.59□□□□□ -0.39
PTPN2-213ENST00000591901 MS4A3Q96HJ5 214 aa12.59□□□□□ -0.39
PTPN2-213ENST00000591901 POTEB2H3BUK9 544 aa12.58□□□□□ -0.4
PTPN2-213ENST00000591901 ASTLQ6HA08 431 aaPredicted RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms