RNA–Protein interactions for RNA: ENST00000590792.1

CCDC58P3-201, Transcript of coiled-coil domain containing 58 pseudogene 3, humanhuman

BASIC

Gene CCDC58P3, Length 430 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58P3-201ENST00000590792 AEBP2Q6ZN18 517 aaPredicted RBP25.27■■□□□ 1.64
CCDC58P3-201ENST00000590792 CHIC1Q5VXU3 224 aa24.59■■□□□ 1.53
CCDC58P3-201ENST00000590792 SENP3Q9H4L4 574 aaPredicted RBP21.66■■□□□ 1.06
CCDC58P3-201ENST00000590792 PHF23Q9BUL5 403 aaPredicted RBP21.65■■□□□ 1.06
CCDC58P3-201ENST00000590792 FOXD1Q16676 465 aa20.08■□□□□ 0.81
CCDC58P3-201ENST00000590792 PLPPR3Q6T4P5 718 aa19.97■□□□□ 0.79
CCDC58P3-201ENST00000590792 PPP6R1Q9UPN7 881 aa19.11■□□□□ 0.65
CCDC58P3-201ENST00000590792 ADRA2BP18089 450 aa19.1■□□□□ 0.65
CCDC58P3-201ENST00000590792 MSH5O43196 834 aa18.87■□□□□ 0.61
CCDC58P3-201ENST00000590792 PIAS4Q8N2W9 510 aaPredicted RBP18.81■□□□□ 0.6
CCDC58P3-201ENST00000590792 POTEDQ86YR6 584 aa18.18■□□□□ 0.5
CCDC58P3-201ENST00000590792 PPP4R3CPQ6ZMV5 832 aa17.61■□□□□ 0.41
CCDC58P3-201ENST00000590792 SCAF1Q9H7N4 1312 aaKnown RBP17.41■□□□□ 0.38
CCDC58P3-201ENST00000590792 MAPK8IP2Q13387 824 aaPredicted RBP17.33■□□□□ 0.36
CCDC58P3-201ENST00000590792 KCNA4P22459 653 aa17.25■□□□□ 0.35
CCDC58P3-201ENST00000590792 DMRT2Q9Y5R5 561 aa17.17■□□□□ 0.34
CCDC58P3-201ENST00000590792 NCBP3Q53F19 620 aaKnown RBP17.12■□□□□ 0.33
CCDC58P3-201ENST00000590792 CNKSR2Q8WXI2 1034 aa17.09■□□□□ 0.33
CCDC58P3-201ENST00000590792 NPM3O75607 178 aaKnown RBP16.92■□□□□ 0.3
CCDC58P3-201ENST00000590792 RNF216Q9NWF9 866 aaPredicted RBP16.75■□□□□ 0.27
CCDC58P3-201ENST00000590792 HOXD11P31277 338 aaPredicted RBP16.68■□□□□ 0.26
CCDC58P3-201ENST00000590792 SLC4A1APQ9BWU0 796 aaKnown RBP16.41■□□□□ 0.22
CCDC58P3-201ENST00000590792 DCAF8L1A6NGE4 600 aa16.38■□□□□ 0.21
CCDC58P3-201ENST00000590792 DNAJC5BQ9UF47 199 aa16.31■□□□□ 0.2
CCDC58P3-201ENST00000590792 RNF39Q9H2S5 420 aa16.07■□□□□ 0.16
CCDC58P3-201ENST00000590792 CACNB1Q02641 598 aaPredicted RBP16.05■□□□□ 0.16
CCDC58P3-201ENST00000590792 EHMT2Q96KQ7 1210 aa16.02■□□□□ 0.16
CCDC58P3-201ENST00000590792 SLC4A2P04920 1241 aa15.97■□□□□ 0.15
CCDC58P3-201ENST00000590792 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.94■□□□□ 0.14
CCDC58P3-201ENST00000590792 ZBTB22O15209 634 aa15.89■□□□□ 0.13
CCDC58P3-201ENST00000590792 C1QBPQ07021 282 aaKnown RBP15.88■□□□□ 0.13
CCDC58P3-201ENST00000590792 FOXD4L1Q9NU39 408 aa15.85■□□□□ 0.13
CCDC58P3-201ENST00000590792 CSRNP3Q8WYN3 585 aa15.77■□□□□ 0.12
CCDC58P3-201ENST00000590792 U3KPZ7 1027 aaPredicted RBP15.68■□□□□ 0.1
CCDC58P3-201ENST00000590792 MYCNP04198 464 aaPredicted RBP15.61■□□□□ 0.09
CCDC58P3-201ENST00000590792 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.43■□□□□ 0.06
CCDC58P3-201ENST00000590792 HNRNPUL2Q1KMD3 747 aaKnown RBP15.43■□□□□ 0.06
CCDC58P3-201ENST00000590792 SAMD1Q6SPF0 538 aaPredicted RBP15.4■□□□□ 0.06
CCDC58P3-201ENST00000590792 SPINK5Q9NQ38 1064 aaPredicted RBP15.27■□□□□ 0.04
CCDC58P3-201ENST00000590792 APLP2Q06481 763 aa15.26■□□□□ 0.03
CCDC58P3-201ENST00000590792 ATF5Q9Y2D1 282 aaPredicted RBP15.24■□□□□ 0.03
CCDC58P3-201ENST00000590792 ATXN8OSP0DMR3 200 aa15.23■□□□□ 0.03
CCDC58P3-201ENST00000590792 CAPN15O75808 1086 aa15.2■□□□□ 0.02
CCDC58P3-201ENST00000590792 TRHP20396 242 aaPredicted RBP15.14■□□□□ 0.01
CCDC58P3-201ENST00000590792 ZNF219Q9P2Y4 722 aaPredicted RBP15.08■□□□□ 0
CCDC58P3-201ENST00000590792 DSG3P32926 999 aa15.05■□□□□ -0
CCDC58P3-201ENST00000590792 ABCB7O75027 752 aa14.94□□□□□ -0.02
CCDC58P3-201ENST00000590792 POLA2Q14181 598 aa14.87□□□□□ -0.03
CCDC58P3-201ENST00000590792 ZBTB12Q9Y330 459 aaPredicted RBP14.58□□□□□ -0.08
CCDC58P3-201ENST00000590792 MKRN4PQ13434 485 aaPredicted RBP14.56□□□□□ -0.08
CCDC58P3-201ENST00000590792 FBLN2P98095 1184 aa14.55□□□□□ -0.08
CCDC58P3-201ENST00000590792 RBM42Q9BTD8 480 aaKnown RBP14.45□□□□□ -0.1
CCDC58P3-201ENST00000590792 OSCARQ8IYS5 282 aa14.4□□□□□ -0.1
CCDC58P3-201ENST00000590792 FKBP8Q14318 412 aa14.29□□□□□ -0.12
CCDC58P3-201ENST00000590792 POTEHQ6S545 545 aa14.28□□□□□ -0.12
CCDC58P3-201ENST00000590792 SPDYE4A6NLX3 237 aa14.23□□□□□ -0.13
CCDC58P3-201ENST00000590792 SPDYE2BA6NHP3 402 aa14.19□□□□□ -0.14
CCDC58P3-201ENST00000590792 SPDYE6P0CI01 402 aa14.19□□□□□ -0.14
CCDC58P3-201ENST00000590792 SPDYE2Q495Y8 402 aa14.19□□□□□ -0.14
CCDC58P3-201ENST00000590792 ZNF692Q9BU19 519 aaPredicted RBP14.17□□□□□ -0.14
CCDC58P3-201ENST00000590792 AKT1S1Q96B36 256 aa14.1□□□□□ -0.15
CCDC58P3-201ENST00000590792 SSUH2Q9Y2M2 353 aa14.1□□□□□ -0.15
CCDC58P3-201ENST00000590792 CHRDL2Q6WN34 429 aa14.02□□□□□ -0.17
CCDC58P3-201ENST00000590792 PABPN1Q86U42 306 aaKnown RBP eCLIP14□□□□□ -0.17
CCDC58P3-201ENST00000590792 PROM2Q8N271 834 aa13.95□□□□□ -0.18
CCDC58P3-201ENST00000590792 REM2Q8IYK8 340 aaPredicted RBP13.9□□□□□ -0.18
CCDC58P3-201ENST00000590792 SPDYE1Q8NFV5 336 aaPredicted RBP13.78□□□□□ -0.2
CCDC58P3-201ENST00000590792 CLEC11AQ9Y240 323 aa13.78□□□□□ -0.2
CCDC58P3-201ENST00000590792 PITPNM1O00562 1244 aa13.76□□□□□ -0.21
CCDC58P3-201ENST00000590792 FBXO3Q9UK99 471 aa13.71□□□□□ -0.21
CCDC58P3-201ENST00000590792 STAG3Q9UJ98 1225 aa13.7□□□□□ -0.22
CCDC58P3-201ENST00000590792 PIP4P2Q8N4L2 257 aa13.68□□□□□ -0.22
CCDC58P3-201ENST00000590792 FXR2P51116 673 aaKnown RBP eCLIP13.65□□□□□ -0.22
CCDC58P3-201ENST00000590792 PRR29P0C7W0 189 aa13.62□□□□□ -0.23
CCDC58P3-201ENST00000590792 VASPP50552 380 aaPredicted RBP13.56□□□□□ -0.24
CCDC58P3-201ENST00000590792 MIER1Q8N108 512 aa13.49□□□□□ -0.25
CCDC58P3-201ENST00000590792 PLCD3Q8N3E9 789 aa13.48□□□□□ -0.25
CCDC58P3-201ENST00000590792 CHADLQ6NUI6 762 aa13.45□□□□□ -0.26
CCDC58P3-201ENST00000590792 CREBZFQ9NS37 354 aa13.45□□□□□ -0.26
CCDC58P3-201ENST00000590792 SP7Q8TDD2 431 aaPredicted RBP13.44□□□□□ -0.26
CCDC58P3-201ENST00000590792 PRKAR2AP13861 404 aaKnown RBP13.42□□□□□ -0.26
CCDC58P3-201ENST00000590792 PLEKHG5O94827 1062 aa13.4□□□□□ -0.26
CCDC58P3-201ENST00000590792 IFNLR1Q8IU57 520 aaPredicted RBP13.39□□□□□ -0.27
CCDC58P3-201ENST00000590792 HAX1O00165 279 aa13.38□□□□□ -0.27
CCDC58P3-201ENST00000590792 KLHL34Q8N239 644 aa13.34□□□□□ -0.27
CCDC58P3-201ENST00000590792 MNX1P50219 401 aaPredicted RBP13.3□□□□□ -0.28
CCDC58P3-201ENST00000590792 ZBTB47Q9UFB7 747 aaPredicted RBP13.28□□□□□ -0.28
CCDC58P3-201ENST00000590792 FARP1Q9Y4F1 1045 aaPredicted RBP13.28□□□□□ -0.28
CCDC58P3-201ENST00000590792 C19orf67A6NJJ6 358 aa13.21□□□□□ -0.29
CCDC58P3-201ENST00000590792 SPOCK2Q92563 424 aa13.2□□□□□ -0.3
CCDC58P3-201ENST00000590792 NPM1P06748 294 aaKnown RBP eCLIP13.19□□□□□ -0.3
CCDC58P3-201ENST00000590792 EVX2Q03828 476 aa13.17□□□□□ -0.3
CCDC58P3-201ENST00000590792 NUBP1P53384 320 aa13.14□□□□□ -0.31
CCDC58P3-201ENST00000590792 RASEFQ8IZ41 740 aa13.11□□□□□ -0.31
CCDC58P3-201ENST00000590792 TSPYL2Q9H2G4 693 aaPredicted RBP13.05□□□□□ -0.32
CCDC58P3-201ENST00000590792 CD44P16070 742 aaKnown RBP13.04□□□□□ -0.32
CCDC58P3-201ENST00000590792 FAM212AQ96EL1 285 aa13.04□□□□□ -0.32
CCDC58P3-201ENST00000590792 CIZ1Q9ULV3 898 aaPredicted RBP13.03□□□□□ -0.32
CCDC58P3-201ENST00000590792 DCAF8Q5TAQ9 597 aa13.02□□□□□ -0.33
CCDC58P3-201ENST00000590792 RTN4Q9NQC3 1192 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms