RNA–Protein interactions for RNA: ENST00000590508.5

ZSWIM4-202, Transcript of zinc finger SWIM-type containing 4, humanhuman

TSL 2

Gene ZSWIM4, Length 2,921 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM4-202ENST00000590508 NISCHQ9Y2I1 1504 aa34.81■■■■□ 3.16
ZSWIM4-202ENST00000590508 SHROOM4Q9ULL8 1493 aa30.68■■■□□ 2.5
ZSWIM4-202ENST00000590508 SUPT5HO00267 1087 aaKnown RBP30.22■■■□□ 2.43
ZSWIM4-202ENST00000590508 DCAF8L2P0C7V8 631 aa29.78■■■□□ 2.36
ZSWIM4-202ENST00000590508 ZCCHC6Q5VYS8 1495 aaKnown RBP29.41■■■□□ 2.3
ZSWIM4-202ENST00000590508 CHIC1Q5VXU3 224 aa29.16■■■□□ 2.26
ZSWIM4-202ENST00000590508 MYO15BQ96JP2 1530 aa29.1■■■□□ 2.25
ZSWIM4-202ENST00000590508 CCDC180Q9P1Z9 1646 aa29.05■■■□□ 2.24
ZSWIM4-202ENST00000590508 PCGF6Q9BYE7 350 aa28.8■■■□□ 2.2
ZSWIM4-202ENST00000590508 LOC105371045A0A1W2PR82 267 aa28.65■■■□□ 2.18
ZSWIM4-202ENST00000590508 HRCP23327 699 aa28.65■■■□□ 2.18
ZSWIM4-202ENST00000590508 PPARGC1BQ86YN6 1023 aaKnown RBP28.47■■■□□ 2.15
ZSWIM4-202ENST00000590508 DCAF1Q9Y4B6 1507 aa28.17■■■□□ 2.1
ZSWIM4-202ENST00000590508 EHMT2Q96KQ7 1210 aa28.12■■■□□ 2.09
ZSWIM4-202ENST00000590508 FAM9AQ8IZU1 332 aaPredicted RBP28.05■■■□□ 2.08
ZSWIM4-202ENST00000590508 SCRIBQ14160 1630 aa27.91■■■□□ 2.06
ZSWIM4-202ENST00000590508 TRIM41Q8WV44 630 aa27.88■■■□□ 2.05
ZSWIM4-202ENST00000590508 TRIM26Q12899 539 aaPredicted RBP27.84■■■□□ 2.05
ZSWIM4-202ENST00000590508 RSF1Q96T23 1441 aaPredicted RBP27.82■■■□□ 2.04
ZSWIM4-202ENST00000590508 ABCC9O60706 1549 aa27.75■■■□□ 2.03
ZSWIM4-202ENST00000590508 RB1CC1Q8TDY2 1594 aa27.57■■■□□ 2
ZSWIM4-202ENST00000590508 CECR2Q9BXF3 1484 aa27.46■■□□□ 1.99
ZSWIM4-202ENST00000590508 MROH2BQ7Z745 1585 aa27.26■■□□□ 1.95
ZSWIM4-202ENST00000590508 TTBK1Q5TCY1 1321 aaPredicted RBP27.19■■□□□ 1.94
ZSWIM4-202ENST00000590508 ZEB1P37275 1124 aaPredicted RBP27.13■■□□□ 1.93
ZSWIM4-202ENST00000590508 WIZO95785 1651 aa27.11■■□□□ 1.93
ZSWIM4-202ENST00000590508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.04■■□□□ 1.92
ZSWIM4-202ENST00000590508 NACADO15069 1562 aa26.99■■□□□ 1.91
ZSWIM4-202ENST00000590508 CCER1Q8TC90 406 aaPredicted RBP26.86■■□□□ 1.89
ZSWIM4-202ENST00000590508 ABCC8Q09428 1581 aa26.76■■□□□ 1.87
ZSWIM4-202ENST00000590508 SCAF1Q9H7N4 1312 aaKnown RBP26.73■■□□□ 1.87
ZSWIM4-202ENST00000590508 CCDC88BA6NC98 1476 aa26.7■■□□□ 1.87
ZSWIM4-202ENST00000590508 PABPN1Q86U42 306 aaKnown RBP eCLIP26.68■■□□□ 1.86
ZSWIM4-202ENST00000590508 BAZ1AQ9NRL2 1556 aaPredicted RBP26.67■■□□□ 1.86
ZSWIM4-202ENST00000590508 UBTFP17480 764 aaKnown RBP26.63■■□□□ 1.85
ZSWIM4-202ENST00000590508 SOGA1O94964 1423 aa26.62■■□□□ 1.85
ZSWIM4-202ENST00000590508 EIF4G1Q04637 1599 aaKnown RBP26.51■■□□□ 1.84
ZSWIM4-202ENST00000590508 RUSC2Q8N2Y8 1516 aa26.51■■□□□ 1.83
ZSWIM4-202ENST00000590508 CEP162Q5TB80 1403 aa26.48■■□□□ 1.83
ZSWIM4-202ENST00000590508 CSRNP3Q8WYN3 585 aa26.45■■□□□ 1.83
ZSWIM4-202ENST00000590508 RANGAP1P46060 587 aaPredicted RBP26.45■■□□□ 1.82
ZSWIM4-202ENST00000590508 TOP2AP11388 1531 aaKnown RBP26.44■■□□□ 1.82
ZSWIM4-202ENST00000590508 SMARCA4P51532 1647 aa26.41■■□□□ 1.82
ZSWIM4-202ENST00000590508 SMARCA2P51531 1590 aa26.4■■□□□ 1.82
ZSWIM4-202ENST00000590508 DIEXFQ68CQ4 756 aaKnown RBP26.39■■□□□ 1.82
ZSWIM4-202ENST00000590508 NEUROD1Q13562 356 aa26.37■■□□□ 1.81
ZSWIM4-202ENST00000590508 HNRNPUL2Q1KMD3 747 aaKnown RBP26.3■■□□□ 1.8
ZSWIM4-202ENST00000590508 TNIKQ9UKE5 1360 aa26.28■■□□□ 1.8
ZSWIM4-202ENST00000590508 ACIN1Q9UKV3 1341 aaKnown RBP26.25■■□□□ 1.79
ZSWIM4-202ENST00000590508 WRNQ14191 1432 aaPredicted RBP eCLIP26.23■■□□□ 1.79
ZSWIM4-202ENST00000590508 UNC13AQ9UPW8 1703 aa26.2■■□□□ 1.78
ZSWIM4-202ENST00000590508 GTF3C3Q9Y5Q9 886 aa26.14■■□□□ 1.78
ZSWIM4-202ENST00000590508 YTHDC1Q96MU7 727 aaKnown RBP26.14■■□□□ 1.77
ZSWIM4-202ENST00000590508 GOLGA3Q08378 1498 aa26.07■■□□□ 1.76
ZSWIM4-202ENST00000590508 EEA1Q15075 1411 aa26.02■■□□□ 1.76
ZSWIM4-202ENST00000590508 ZNF316A6NFI3 1004 aaPredicted RBP26.02■■□□□ 1.76
ZSWIM4-202ENST00000590508 CENPBP07199 599 aaPredicted RBP26■■□□□ 1.75
ZSWIM4-202ENST00000590508 APLP2Q06481 763 aa25.96■■□□□ 1.75
ZSWIM4-202ENST00000590508 BICRAQ9NZM4 1560 aa25.96■■□□□ 1.75
ZSWIM4-202ENST00000590508 PELP1Q8IZL8 1130 aaKnown RBP25.95■■□□□ 1.74
ZSWIM4-202ENST00000590508 CLIP1P30622 1438 aa25.95■■□□□ 1.74
ZSWIM4-202ENST00000590508 SYNJ1O43426 1573 aa25.95■■□□□ 1.74
ZSWIM4-202ENST00000590508 MIER1Q8N108 512 aa25.87■■□□□ 1.73
ZSWIM4-202ENST00000590508 CEP164Q9UPV0 1460 aa25.86■■□□□ 1.73
ZSWIM4-202ENST00000590508 RAPGEF2Q9Y4G8 1499 aa25.86■■□□□ 1.73
ZSWIM4-202ENST00000590508 ATAD2BQ9ULI0 1458 aa25.81■■□□□ 1.72
ZSWIM4-202ENST00000590508 BAZ1BQ9UIG0 1483 aaKnown RBP25.79■■□□□ 1.72
ZSWIM4-202ENST00000590508 VPS8Q8N3P4 1428 aa25.74■■□□□ 1.71
ZSWIM4-202ENST00000590508 KANK4Q5T7N3 995 aaPredicted RBP25.67■■□□□ 1.7
ZSWIM4-202ENST00000590508 PEG3Q9GZU2 1588 aa25.64■■□□□ 1.7
ZSWIM4-202ENST00000590508 KIF21BO75037 1637 aa25.64■■□□□ 1.7
ZSWIM4-202ENST00000590508 ITGAEP38570 1179 aa25.64■■□□□ 1.7
ZSWIM4-202ENST00000590508 TOP2BQ02880 1626 aa25.41■■□□□ 1.66
ZSWIM4-202ENST00000590508 DHX57Q6P158 1386 aaKnown RBP25.4■■□□□ 1.66
ZSWIM4-202ENST00000590508 ARAP1Q96P48 1450 aa25.39■■□□□ 1.66
ZSWIM4-202ENST00000590508 PRXQ9BXM0 1461 aa25.35■■□□□ 1.65
ZSWIM4-202ENST00000590508 CUX1P39880 1505 aa25.3■■□□□ 1.64
ZSWIM4-202ENST00000590508 ATP1B4Q9UN42 357 aaPredicted RBP25.29■■□□□ 1.64
ZSWIM4-202ENST00000590508 P3H3Q8IVL6 736 aa25.28■■□□□ 1.64
ZSWIM4-202ENST00000590508 KIF27Q86VH2 1401 aa25.26■■□□□ 1.63
ZSWIM4-202ENST00000590508 BIVM-ERCC5R4GMW8 1640 aa25.2■■□□□ 1.62
ZSWIM4-202ENST00000590508 KCNH8Q96L42 1107 aa25.18■■□□□ 1.62
ZSWIM4-202ENST00000590508 ERICH3Q5RHP9 1530 aa25.18■■□□□ 1.62
ZSWIM4-202ENST00000590508 CCNB3Q8WWL7 1395 aa25.17■■□□□ 1.62
ZSWIM4-202ENST00000590508 ARHGAP35Q9NRY4 1499 aa25.16■■□□□ 1.62
ZSWIM4-202ENST00000590508 FAM50AQ14320 339 aaKnown RBP25.14■■□□□ 1.61
ZSWIM4-202ENST00000590508 NCAPD3P42695 1498 aa25.12■■□□□ 1.61
ZSWIM4-202ENST00000590508 CLSPNQ9HAW4 1339 aa25.12■■□□□ 1.61
ZSWIM4-202ENST00000590508 CUX2O14529 1486 aa25.1■■□□□ 1.61
ZSWIM4-202ENST00000590508 RRBP1Q9P2E9 1410 aaKnown RBP25.09■■□□□ 1.61
ZSWIM4-202ENST00000590508 SIN3AQ96ST3 1273 aa25.09■■□□□ 1.61
ZSWIM4-202ENST00000590508 HIRIP3Q9BW71 556 aaPredicted RBP25.08■■□□□ 1.61
ZSWIM4-202ENST00000590508 IGF1RP08069 1367 aa25.06■■□□□ 1.6
ZSWIM4-202ENST00000590508 RAB3GAP2Q9H2M9 1393 aa25.06■■□□□ 1.6
ZSWIM4-202ENST00000590508 CFTRP13569 1480 aa25.05■■□□□ 1.6
ZSWIM4-202ENST00000590508 SUPT16HQ9Y5B9 1047 aaKnown RBP25.01■■□□□ 1.59
ZSWIM4-202ENST00000590508 CARMIL1Q5VZK9 1371 aa24.98■■□□□ 1.59
ZSWIM4-202ENST00000590508 DDX10Q13206 875 aaKnown RBP24.98■■□□□ 1.59
ZSWIM4-202ENST00000590508 HMGXB3Q12766 1538 aa24.98■■□□□ 1.59
ZSWIM4-202ENST00000590508 PHLDB1Q86UU1 1377 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms