RNA–Protein interactions for RNA: ENST00000589799.5

ZNF235-204, Transcript of zinc finger protein 235, humanhuman

TSL 1 (best) BASIC

Gene ZNF235, Length 955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF235-204ENST00000589799 CHIC1Q5VXU3 224 aa20.77■□□□□ 0.92
ZNF235-204ENST00000589799 AEBP2Q6ZN18 517 aaPredicted RBP20.63■□□□□ 0.89
ZNF235-204ENST00000589799 PHF23Q9BUL5 403 aaPredicted RBP18.28■□□□□ 0.52
ZNF235-204ENST00000589799 SENP3Q9H4L4 574 aaPredicted RBP17.5■□□□□ 0.39
ZNF235-204ENST00000589799 PLPPR3Q6T4P5 718 aa17.18■□□□□ 0.34
ZNF235-204ENST00000589799 NISCHQ9Y2I1 1504 aa16.18■□□□□ 0.18
ZNF235-204ENST00000589799 FOXD1Q16676 465 aa16.11■□□□□ 0.17
ZNF235-204ENST00000589799 ADRA2BP18089 450 aa16■□□□□ 0.15
ZNF235-204ENST00000589799 PPP6R1Q9UPN7 881 aa15.94■□□□□ 0.14
ZNF235-204ENST00000589799 KCNA4P22459 653 aa15.49■□□□□ 0.07
ZNF235-204ENST00000589799 PIAS4Q8N2W9 510 aaPredicted RBP15.41■□□□□ 0.06
ZNF235-204ENST00000589799 PPP4R3CPQ6ZMV5 832 aa15.18■□□□□ 0.02
ZNF235-204ENST00000589799 EHMT2Q96KQ7 1210 aa15.18■□□□□ 0.02
ZNF235-204ENST00000589799 ABCC9O60706 1549 aa15.07■□□□□ 0
ZNF235-204ENST00000589799 NCBP3Q53F19 620 aaKnown RBP15.03■□□□□ -0
ZNF235-204ENST00000589799 SLC4A1APQ9BWU0 796 aaKnown RBP14.91□□□□□ -0.02
ZNF235-204ENST00000589799 MSH5O43196 834 aa14.9□□□□□ -0.02
ZNF235-204ENST00000589799 CCDC180Q9P1Z9 1646 aa14.75□□□□□ -0.05
ZNF235-204ENST00000589799 NPM3O75607 178 aaKnown RBP14.73□□□□□ -0.05
ZNF235-204ENST00000589799 SCAF1Q9H7N4 1312 aaKnown RBP14.72□□□□□ -0.05
ZNF235-204ENST00000589799 CNKSR2Q8WXI2 1034 aa14.64□□□□□ -0.07
ZNF235-204ENST00000589799 CSRNP3Q8WYN3 585 aa14.64□□□□□ -0.07
ZNF235-204ENST00000589799 POTEDQ86YR6 584 aa14.4□□□□□ -0.1
ZNF235-204ENST00000589799 DNAJC5BQ9UF47 199 aa14.36□□□□□ -0.11
ZNF235-204ENST00000589799 MAPK8IP2Q13387 824 aaPredicted RBP14.32□□□□□ -0.12
ZNF235-204ENST00000589799 ZBTB22O15209 634 aa14.22□□□□□ -0.13
ZNF235-204ENST00000589799 RNF216Q9NWF9 866 aaPredicted RBP14.21□□□□□ -0.13
ZNF235-204ENST00000589799 RB1CC1Q8TDY2 1594 aa14.2□□□□□ -0.14
ZNF235-204ENST00000589799 FOXD4L1Q9NU39 408 aa14.13□□□□□ -0.15
ZNF235-204ENST00000589799 DMRT2Q9Y5R5 561 aa14.03□□□□□ -0.16
ZNF235-204ENST00000589799 NACADO15069 1562 aa13.98□□□□□ -0.17
ZNF235-204ENST00000589799 HOXD11P31277 338 aaPredicted RBP13.96□□□□□ -0.17
ZNF235-204ENST00000589799 PABPN1Q86U42 306 aaKnown RBP eCLIP13.93□□□□□ -0.18
ZNF235-204ENST00000589799 UNC13AQ9UPW8 1703 aa13.93□□□□□ -0.18
ZNF235-204ENST00000589799 DCAF8L2P0C7V8 631 aa13.83□□□□□ -0.2
ZNF235-204ENST00000589799 BICRAQ9NZM4 1560 aa13.76□□□□□ -0.21
ZNF235-204ENST00000589799 SLC4A2P04920 1241 aa13.73□□□□□ -0.21
ZNF235-204ENST00000589799 MYCNP04198 464 aaPredicted RBP13.64□□□□□ -0.23
ZNF235-204ENST00000589799 MYO15BQ96JP2 1530 aa13.63□□□□□ -0.23
ZNF235-204ENST00000589799 CECR2Q9BXF3 1484 aa13.61□□□□□ -0.23
ZNF235-204ENST00000589799 CC2D2AQ9P2K1 1620 aa13.61□□□□□ -0.23
ZNF235-204ENST00000589799 ATXN8OSP0DMR3 200 aa13.57□□□□□ -0.24
ZNF235-204ENST00000589799 SHROOM4Q9ULL8 1493 aa13.55□□□□□ -0.24
ZNF235-204ENST00000589799 DCAF8L1A6NGE4 600 aa13.49□□□□□ -0.25
ZNF235-204ENST00000589799 EIF4G1Q04637 1599 aaKnown RBP13.48□□□□□ -0.25
ZNF235-204ENST00000589799 DNAJC5Q9H3Z4 198 aa13.47□□□□□ -0.25
ZNF235-204ENST00000589799 SCRIBQ14160 1630 aa13.42□□□□□ -0.26
ZNF235-204ENST00000589799 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.39□□□□□ -0.27
ZNF235-204ENST00000589799 ZCCHC6Q5VYS8 1495 aaKnown RBP13.34□□□□□ -0.27
ZNF235-204ENST00000589799 DCAF1Q9Y4B6 1507 aa13.32□□□□□ -0.28
ZNF235-204ENST00000589799 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.3□□□□□ -0.28
ZNF235-204ENST00000589799 HNRNPUL2Q1KMD3 747 aaKnown RBP13.3□□□□□ -0.28
ZNF235-204ENST00000589799 FKBP8Q14318 412 aa13.27□□□□□ -0.29
ZNF235-204ENST00000589799 SAMD1Q6SPF0 538 aaPredicted RBP13.25□□□□□ -0.29
ZNF235-204ENST00000589799 AMER1Q5JTC6 1135 aaPredicted RBP13.16□□□□□ -0.3
ZNF235-204ENST00000589799 U3KPZ7 1027 aaPredicted RBP13.16□□□□□ -0.3
ZNF235-204ENST00000589799 ATF5Q9Y2D1 282 aaPredicted RBP13.15□□□□□ -0.3
ZNF235-204ENST00000589799 CUX2O14529 1486 aa13.13□□□□□ -0.31
ZNF235-204ENST00000589799 RTN4Q9NQC3 1192 aaKnown RBP13.09□□□□□ -0.31
ZNF235-204ENST00000589799 ERCC6Q03468 1493 aa13.07□□□□□ -0.32
ZNF235-204ENST00000589799 APLP2Q06481 763 aa13.04□□□□□ -0.32
ZNF235-204ENST00000589799 ZNF219Q9P2Y4 722 aaPredicted RBP12.94□□□□□ -0.34
ZNF235-204ENST00000589799 NCAPD3P42695 1498 aa12.86□□□□□ -0.35
ZNF235-204ENST00000589799 SLC24A1O60721 1099 aa12.84□□□□□ -0.35
ZNF235-204ENST00000589799 NESP48681 1621 aa12.83□□□□□ -0.36
ZNF235-204ENST00000589799 TRIM41Q8WV44 630 aa12.81□□□□□ -0.36
ZNF235-204ENST00000589799 THOC2Q8NI27 1593 aaKnown RBP12.81□□□□□ -0.36
ZNF235-204ENST00000589799 ATAD2BQ9ULI0 1458 aa12.79□□□□□ -0.36
ZNF235-204ENST00000589799 HMGXB3Q12766 1538 aa12.79□□□□□ -0.36
ZNF235-204ENST00000589799 SMARCA2P51531 1590 aa12.78□□□□□ -0.36
ZNF235-204ENST00000589799 SMARCA4P51532 1647 aa12.74□□□□□ -0.37
ZNF235-204ENST00000589799 CACNB1Q02641 598 aaPredicted RBP12.72□□□□□ -0.37
ZNF235-204ENST00000589799 KIF21AQ7Z4S6 1674 aa12.71□□□□□ -0.37
ZNF235-204ENST00000589799 LAMC3Q9Y6N6 1575 aa12.7□□□□□ -0.38
ZNF235-204ENST00000589799 SPDYE4A6NLX3 237 aa12.7□□□□□ -0.38
ZNF235-204ENST00000589799 BAZ1BQ9UIG0 1483 aaKnown RBP12.7□□□□□ -0.38
ZNF235-204ENST00000589799 TRHP20396 242 aaPredicted RBP12.69□□□□□ -0.38
ZNF235-204ENST00000589799 RNF39Q9H2S5 420 aa12.69□□□□□ -0.38
ZNF235-204ENST00000589799 FBLN2P98095 1184 aa12.68□□□□□ -0.38
ZNF235-204ENST00000589799 FBXO3Q9UK99 471 aa12.68□□□□□ -0.38
ZNF235-204ENST00000589799 CAPN15O75808 1086 aa12.62□□□□□ -0.39
ZNF235-204ENST00000589799 MKRN4PQ13434 485 aaPredicted RBP12.62□□□□□ -0.39
ZNF235-204ENST00000589799 SPINK5Q9NQ38 1064 aaPredicted RBP12.62□□□□□ -0.39
ZNF235-204ENST00000589799 BAZ1AQ9NRL2 1556 aaPredicted RBP12.61□□□□□ -0.39
ZNF235-204ENST00000589799 PDS5BQ9NTI5 1447 aa12.61□□□□□ -0.39
ZNF235-204ENST00000589799 POLA2Q14181 598 aa12.6□□□□□ -0.39
ZNF235-204ENST00000589799 PEG3Q9GZU2 1588 aa12.58□□□□□ -0.4
ZNF235-204ENST00000589799 MRC2Q9UBG0 1479 aa12.55□□□□□ -0.4
ZNF235-204ENST00000589799 WDR62O43379 1518 aa12.53□□□□□ -0.4
ZNF235-204ENST00000589799 C1QBPQ07021 282 aaKnown RBP12.53□□□□□ -0.4
ZNF235-204ENST00000589799 PROM2Q8N271 834 aa12.49□□□□□ -0.41
ZNF235-204ENST00000589799 ZBTB12Q9Y330 459 aaPredicted RBP12.49□□□□□ -0.41
ZNF235-204ENST00000589799 MROH2BQ7Z745 1585 aa12.47□□□□□ -0.41
ZNF235-204ENST00000589799 CADPSQ9ULU8 1353 aa12.46□□□□□ -0.41
ZNF235-204ENST00000589799 VASPP50552 380 aaPredicted RBP12.45□□□□□ -0.42
ZNF235-204ENST00000589799 CEP164Q9UPV0 1460 aa12.43□□□□□ -0.42
ZNF235-204ENST00000589799 OSCARQ8IYS5 282 aa12.43□□□□□ -0.42
ZNF235-204ENST00000589799 ABCB7O75027 752 aa12.4□□□□□ -0.42
ZNF235-204ENST00000589799 RIMBP3CA6NJZ7 1639 aa12.38□□□□□ -0.43
ZNF235-204ENST00000589799 RIMBP3BA6NNM3 1639 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms