RNA–Protein interactions for RNA: ENST00000589723.1

AC068473.3-202, humanhuman

TSL 1 (best) BASIC

Gene AC068473.3, Length 4,167 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC068473.3-202ENST00000589723 NISCHQ9Y2I1 1504 aa20.46■□□□□ 0.87
AC068473.3-202ENST00000589723 DCAF8L2P0C7V8 631 aa20.42■□□□□ 0.86
AC068473.3-202ENST00000589723 SUPT5HO00267 1087 aaKnown RBP19.87■□□□□ 0.77
AC068473.3-202ENST00000589723 SHROOM4Q9ULL8 1493 aa19.71■□□□□ 0.75
AC068473.3-202ENST00000589723 EHMT2Q96KQ7 1210 aa19.33■□□□□ 0.69
AC068473.3-202ENST00000589723 PCGF6Q9BYE7 350 aa18.91■□□□□ 0.62
AC068473.3-202ENST00000589723 FAM9AQ8IZU1 332 aaPredicted RBP18.72■□□□□ 0.59
AC068473.3-202ENST00000589723 TTBK1Q5TCY1 1321 aaPredicted RBP18.67■□□□□ 0.58
AC068473.3-202ENST00000589723 PPARGC1BQ86YN6 1023 aaKnown RBP18.26■□□□□ 0.51
AC068473.3-202ENST00000589723 TRIM41Q8WV44 630 aa18.24■□□□□ 0.51
AC068473.3-202ENST00000589723 RANGAP1P46060 587 aaPredicted RBP18.16■□□□□ 0.5
AC068473.3-202ENST00000589723 HRCP23327 699 aa18.15■□□□□ 0.5
AC068473.3-202ENST00000589723 LOC105371045A0A1W2PR82 267 aa18.1■□□□□ 0.49
AC068473.3-202ENST00000589723 CHIC1Q5VXU3 224 aa18.07■□□□□ 0.48
AC068473.3-202ENST00000589723 CCER1Q8TC90 406 aaPredicted RBP18.07■□□□□ 0.48
AC068473.3-202ENST00000589723 APLP2Q06481 763 aa18.05■□□□□ 0.48
AC068473.3-202ENST00000589723 YTHDC1Q96MU7 727 aaKnown RBP18.02■□□□□ 0.47
AC068473.3-202ENST00000589723 CENPBP07199 599 aaPredicted RBP17.86■□□□□ 0.45
AC068473.3-202ENST00000589723 UBTFP17480 764 aaKnown RBP17.86■□□□□ 0.45
AC068473.3-202ENST00000589723 PELP1Q8IZL8 1130 aaKnown RBP17.84■□□□□ 0.45
AC068473.3-202ENST00000589723 ZEB1P37275 1124 aaPredicted RBP17.83■□□□□ 0.45
AC068473.3-202ENST00000589723 TRIM26Q12899 539 aaPredicted RBP17.8■□□□□ 0.44
AC068473.3-202ENST00000589723 ATP1B4Q9UN42 357 aaPredicted RBP17.63■□□□□ 0.41
AC068473.3-202ENST00000589723 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.56■□□□□ 0.4
AC068473.3-202ENST00000589723 HNRNPUL2Q1KMD3 747 aaKnown RBP17.45■□□□□ 0.38
AC068473.3-202ENST00000589723 ITGAEP38570 1179 aa17.42■□□□□ 0.38
AC068473.3-202ENST00000589723 ERICH6Q7L0X2 663 aa17.4■□□□□ 0.38
AC068473.3-202ENST00000589723 DIEXFQ68CQ4 756 aaKnown RBP17.28■□□□□ 0.36
AC068473.3-202ENST00000589723 CNGB1Q14028 1251 aaPredicted RBP17.26■□□□□ 0.35
AC068473.3-202ENST00000589723 ABCC9O60706 1549 aa17.26■□□□□ 0.35
AC068473.3-202ENST00000589723 NEFLP07196 543 aa17.24■□□□□ 0.35
AC068473.3-202ENST00000589723 GTF3C3Q9Y5Q9 886 aa17.22■□□□□ 0.35
AC068473.3-202ENST00000589723 PABPN1Q86U42 306 aaKnown RBP eCLIP17.22■□□□□ 0.35
AC068473.3-202ENST00000589723 MYO15BQ96JP2 1530 aa17.14■□□□□ 0.33
AC068473.3-202ENST00000589723 BCANQ96GW7 911 aa17.07■□□□□ 0.32
AC068473.3-202ENST00000589723 POLR3GLQ9BT43 218 aa17.05■□□□□ 0.32
AC068473.3-202ENST00000589723 SCAF1Q9H7N4 1312 aaKnown RBP17.05■□□□□ 0.32
AC068473.3-202ENST00000589723 CCDC180Q9P1Z9 1646 aa17.02■□□□□ 0.32
AC068473.3-202ENST00000589723 ZCCHC6Q5VYS8 1495 aaKnown RBP17.02■□□□□ 0.31
AC068473.3-202ENST00000589723 MYT1Q01538 1121 aa16.99■□□□□ 0.31
AC068473.3-202ENST00000589723 ACIN1Q9UKV3 1341 aaKnown RBP16.92■□□□□ 0.3
AC068473.3-202ENST00000589723 NEUROD1Q13562 356 aa16.88■□□□□ 0.29
AC068473.3-202ENST00000589723 FAM50AQ14320 339 aaKnown RBP16.85■□□□□ 0.29
AC068473.3-202ENST00000589723 CSRNP3Q8WYN3 585 aa16.84■□□□□ 0.29
AC068473.3-202ENST00000589723 SCRIBQ14160 1630 aa16.81■□□□□ 0.28
AC068473.3-202ENST00000589723 DCAF1Q9Y4B6 1507 aa16.77■□□□□ 0.28
AC068473.3-202ENST00000589723 ZNF316A6NFI3 1004 aaPredicted RBP16.77■□□□□ 0.27
AC068473.3-202ENST00000589723 P3H3Q8IVL6 736 aa16.7■□□□□ 0.26
AC068473.3-202ENST00000589723 TRIM52Q96A61 297 aa16.6■□□□□ 0.25
AC068473.3-202ENST00000589723 ARID3CA6NKF2 412 aa16.56■□□□□ 0.24
AC068473.3-202ENST00000589723 RSF1Q96T23 1441 aaPredicted RBP16.56■□□□□ 0.24
AC068473.3-202ENST00000589723 MYT1LQ9UL68 1186 aa16.54■□□□□ 0.24
AC068473.3-202ENST00000589723 DAXXQ9UER7 740 aaPredicted RBP16.52■□□□□ 0.24
AC068473.3-202ENST00000589723 ZNF326Q5BKZ1 582 aaKnown RBP16.51■□□□□ 0.23
AC068473.3-202ENST00000589723 MIER1Q8N108 512 aa16.5■□□□□ 0.23
AC068473.3-202ENST00000589723 FKBP8Q14318 412 aa16.45■□□□□ 0.22
AC068473.3-202ENST00000589723 ANP32CO43423 234 aa16.44■□□□□ 0.22
AC068473.3-202ENST00000589723 HIRIP3Q9BW71 556 aaPredicted RBP16.44■□□□□ 0.22
AC068473.3-202ENST00000589723 RTL5Q5HYW3 569 aaPredicted RBP16.43■□□□□ 0.22
AC068473.3-202ENST00000589723 DDX10Q13206 875 aaKnown RBP16.41■□□□□ 0.22
AC068473.3-202ENST00000589723 SLC4A1APQ9BWU0 796 aaKnown RBP16.37■□□□□ 0.21
AC068473.3-202ENST00000589723 FBLN2P98095 1184 aa16.37■□□□□ 0.21
AC068473.3-202ENST00000589723 CLSPNQ9HAW4 1339 aa16.36■□□□□ 0.21
AC068473.3-202ENST00000589723 CDK11AQ9UQ88 783 aaPredicted RBP16.36■□□□□ 0.21
AC068473.3-202ENST00000589723 IRX6P78412 446 aaPredicted RBP16.33■□□□□ 0.2
AC068473.3-202ENST00000589723 SENP3-EIF4A1A0A087X0R7 540 aa16.3■□□□□ 0.2
AC068473.3-202ENST00000589723 CECR2Q9BXF3 1484 aa16.3■□□□□ 0.2
AC068473.3-202ENST00000589723 CEP162Q5TB80 1403 aa16.29■□□□□ 0.2
AC068473.3-202ENST00000589723 NPM2Q86SE8 214 aaKnown RBP16.27■□□□□ 0.19
AC068473.3-202ENST00000589723 BCL11AQ9H165 835 aa16.27■□□□□ 0.19
AC068473.3-202ENST00000589723 CLIP1P30622 1438 aa16.27■□□□□ 0.19
AC068473.3-202ENST00000589723 HNRNPUQ00839 825 aaKnown RBP eCLIP16.25■□□□□ 0.19
AC068473.3-202ENST00000589723 ZNF777Q9ULD5 760 aaPredicted RBP16.23■□□□□ 0.19
AC068473.3-202ENST00000589723 SALL2Q9Y467 1007 aaPredicted RBP16.23■□□□□ 0.19
AC068473.3-202ENST00000589723 CHIC2Q9UKJ5 165 aa16.23■□□□□ 0.19
AC068473.3-202ENST00000589723 RB1CC1Q8TDY2 1594 aa16.22■□□□□ 0.19
AC068473.3-202ENST00000589723 NACADO15069 1562 aa16.21■□□□□ 0.19
AC068473.3-202ENST00000589723 FAM9BQ8IZU0 186 aa16.21■□□□□ 0.19
AC068473.3-202ENST00000589723 TONSLQ96HA7 1378 aa16.16■□□□□ 0.18
AC068473.3-202ENST00000589723 NBR1Q14596 966 aa16.16■□□□□ 0.18
AC068473.3-202ENST00000589723 SOGA1O94964 1423 aa16.12■□□□□ 0.17
AC068473.3-202ENST00000589723 WRNQ14191 1432 aaPredicted RBP eCLIP16.12■□□□□ 0.17
AC068473.3-202ENST00000589723 GOLGA3Q08378 1498 aa16.09■□□□□ 0.17
AC068473.3-202ENST00000589723 TNIKQ9UKE5 1360 aa16.09■□□□□ 0.17
AC068473.3-202ENST00000589723 MROH2BQ7Z745 1585 aa16.03■□□□□ 0.16
AC068473.3-202ENST00000589723 EIF5BO60841 1220 aaKnown RBP16.02■□□□□ 0.16
AC068473.3-202ENST00000589723 RRP7BPQ9NSQ0 103 aa16.02■□□□□ 0.16
AC068473.3-202ENST00000589723 ANP32AP39687 249 aaKnown RBP16.02■□□□□ 0.16
AC068473.3-202ENST00000589723 SIN3AQ96ST3 1273 aa16.01■□□□□ 0.15
AC068473.3-202ENST00000589723 EEA1Q15075 1411 aa16.01■□□□□ 0.15
AC068473.3-202ENST00000589723 MTUS2Q5JR59 1369 aa15.99■□□□□ 0.15
AC068473.3-202ENST00000589723 ABCC8Q09428 1581 aa15.98■□□□□ 0.15
AC068473.3-202ENST00000589723 CCDC88BA6NC98 1476 aa15.96■□□□□ 0.15
AC068473.3-202ENST00000589723 SUPT16HQ9Y5B9 1047 aaKnown RBP15.96■□□□□ 0.14
AC068473.3-202ENST00000589723 ARXQ96QS3 562 aa15.95■□□□□ 0.14
AC068473.3-202ENST00000589723 MRS2Q9HD23 443 aa15.94■□□□□ 0.14
AC068473.3-202ENST00000589723 KDM2AQ9Y2K7 1162 aa15.93■□□□□ 0.14
AC068473.3-202ENST00000589723 CEP164Q9UPV0 1460 aa15.93■□□□□ 0.14
AC068473.3-202ENST00000589723 CCDC136Q96JN2 1154 aa15.93■□□□□ 0.14
AC068473.3-202ENST00000589723 BAZ1AQ9NRL2 1556 aaPredicted RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms