RNA–Protein interactions for RNA: ENST00000589561.5

SLC44A2-210, Transcript of solute carrier family 44 member 2, humanhuman

TSL 2

Gene SLC44A2, Length 2,577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2-210ENST00000589561 NISCHQ9Y2I1 1504 aa33.49■■■□□ 2.95
SLC44A2-210ENST00000589561 SHROOM4Q9ULL8 1493 aa29.1■■■□□ 2.25
SLC44A2-210ENST00000589561 SUPT5HO00267 1087 aaKnown RBP28.65■■■□□ 2.18
SLC44A2-210ENST00000589561 ZCCHC6Q5VYS8 1495 aaKnown RBP28.35■■■□□ 2.13
SLC44A2-210ENST00000589561 CCDC180Q9P1Z9 1646 aa28.17■■■□□ 2.1
SLC44A2-210ENST00000589561 DCAF8L2P0C7V8 631 aa28.04■■■□□ 2.08
SLC44A2-210ENST00000589561 MYO15BQ96JP2 1530 aa27.91■■■□□ 2.06
SLC44A2-210ENST00000589561 CHIC1Q5VXU3 224 aa27.89■■■□□ 2.05
SLC44A2-210ENST00000589561 HRCP23327 699 aa27.49■■□□□ 1.99
SLC44A2-210ENST00000589561 PCGF6Q9BYE7 350 aa27.41■■□□□ 1.98
SLC44A2-210ENST00000589561 DCAF1Q9Y4B6 1507 aa27.29■■□□□ 1.96
SLC44A2-210ENST00000589561 LOC105371045A0A1W2PR82 267 aa27.23■■□□□ 1.95
SLC44A2-210ENST00000589561 PPARGC1BQ86YN6 1023 aaKnown RBP27.11■■□□□ 1.93
SLC44A2-210ENST00000589561 ABCC9O60706 1549 aa26.79■■□□□ 1.88
SLC44A2-210ENST00000589561 SCRIBQ14160 1630 aa26.72■■□□□ 1.87
SLC44A2-210ENST00000589561 RSF1Q96T23 1441 aaPredicted RBP26.69■■□□□ 1.86
SLC44A2-210ENST00000589561 TRIM26Q12899 539 aaPredicted RBP26.66■■□□□ 1.86
SLC44A2-210ENST00000589561 TRIM41Q8WV44 630 aa26.53■■□□□ 1.84
SLC44A2-210ENST00000589561 FAM9AQ8IZU1 332 aaPredicted RBP26.53■■□□□ 1.84
SLC44A2-210ENST00000589561 RB1CC1Q8TDY2 1594 aa26.49■■□□□ 1.83
SLC44A2-210ENST00000589561 EHMT2Q96KQ7 1210 aa26.43■■□□□ 1.82
SLC44A2-210ENST00000589561 CECR2Q9BXF3 1484 aa26.27■■□□□ 1.8
SLC44A2-210ENST00000589561 MROH2BQ7Z745 1585 aa26.15■■□□□ 1.78
SLC44A2-210ENST00000589561 ZEB1P37275 1124 aaPredicted RBP26.06■■□□□ 1.76
SLC44A2-210ENST00000589561 WIZO95785 1651 aa26.05■■□□□ 1.76
SLC44A2-210ENST00000589561 NACADO15069 1562 aa26.02■■□□□ 1.76
SLC44A2-210ENST00000589561 BAZ1AQ9NRL2 1556 aaPredicted RBP25.75■■□□□ 1.71
SLC44A2-210ENST00000589561 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.71■■□□□ 1.71
SLC44A2-210ENST00000589561 EIF4G1Q04637 1599 aaKnown RBP25.69■■□□□ 1.7
SLC44A2-210ENST00000589561 ABCC8Q09428 1581 aa25.63■■□□□ 1.69
SLC44A2-210ENST00000589561 TTBK1Q5TCY1 1321 aaPredicted RBP25.61■■□□□ 1.69
SLC44A2-210ENST00000589561 SCAF1Q9H7N4 1312 aaKnown RBP25.61■■□□□ 1.69
SLC44A2-210ENST00000589561 CCDC88BA6NC98 1476 aa25.56■■□□□ 1.68
SLC44A2-210ENST00000589561 CCER1Q8TC90 406 aaPredicted RBP25.56■■□□□ 1.68
SLC44A2-210ENST00000589561 TOP2AP11388 1531 aaKnown RBP25.48■■□□□ 1.67
SLC44A2-210ENST00000589561 SOGA1O94964 1423 aa25.44■■□□□ 1.66
SLC44A2-210ENST00000589561 SMARCA4P51532 1647 aa25.44■■□□□ 1.66
SLC44A2-210ENST00000589561 SMARCA2P51531 1590 aa25.42■■□□□ 1.66
SLC44A2-210ENST00000589561 CEP162Q5TB80 1403 aa25.38■■□□□ 1.65
SLC44A2-210ENST00000589561 RUSC2Q8N2Y8 1516 aa25.36■■□□□ 1.65
SLC44A2-210ENST00000589561 UNC13AQ9UPW8 1703 aa25.35■■□□□ 1.65
SLC44A2-210ENST00000589561 WRNQ14191 1432 aaPredicted RBP eCLIP25.31■■□□□ 1.64
SLC44A2-210ENST00000589561 UBTFP17480 764 aaKnown RBP25.27■■□□□ 1.64
SLC44A2-210ENST00000589561 CSRNP3Q8WYN3 585 aa25.26■■□□□ 1.63
SLC44A2-210ENST00000589561 TNIKQ9UKE5 1360 aa25.25■■□□□ 1.63
SLC44A2-210ENST00000589561 PABPN1Q86U42 306 aaKnown RBP eCLIP25.22■■□□□ 1.63
SLC44A2-210ENST00000589561 NEUROD1Q13562 356 aa25.22■■□□□ 1.63
SLC44A2-210ENST00000589561 DIEXFQ68CQ4 756 aaKnown RBP25.21■■□□□ 1.63
SLC44A2-210ENST00000589561 ACIN1Q9UKV3 1341 aaKnown RBP25.17■■□□□ 1.62
SLC44A2-210ENST00000589561 EEA1Q15075 1411 aa25.08■■□□□ 1.6
SLC44A2-210ENST00000589561 PELP1Q8IZL8 1130 aaKnown RBP25.07■■□□□ 1.6
SLC44A2-210ENST00000589561 GOLGA3Q08378 1498 aa25.04■■□□□ 1.6
SLC44A2-210ENST00000589561 BICRAQ9NZM4 1560 aa25■■□□□ 1.59
SLC44A2-210ENST00000589561 GTF3C3Q9Y5Q9 886 aa24.97■■□□□ 1.59
SLC44A2-210ENST00000589561 HNRNPUL2Q1KMD3 747 aaKnown RBP24.97■■□□□ 1.59
SLC44A2-210ENST00000589561 SYNJ1O43426 1573 aa24.94■■□□□ 1.58
SLC44A2-210ENST00000589561 ZNF316A6NFI3 1004 aaPredicted RBP24.91■■□□□ 1.58
SLC44A2-210ENST00000589561 RANGAP1P46060 587 aaPredicted RBP24.9■■□□□ 1.58
SLC44A2-210ENST00000589561 CENPBP07199 599 aaPredicted RBP24.88■■□□□ 1.57
SLC44A2-210ENST00000589561 CEP164Q9UPV0 1460 aa24.85■■□□□ 1.57
SLC44A2-210ENST00000589561 CLIP1P30622 1438 aa24.83■■□□□ 1.57
SLC44A2-210ENST00000589561 PEG3Q9GZU2 1588 aa24.82■■□□□ 1.56
SLC44A2-210ENST00000589561 KIF21BO75037 1637 aa24.79■■□□□ 1.56
SLC44A2-210ENST00000589561 YTHDC1Q96MU7 727 aaKnown RBP24.78■■□□□ 1.56
SLC44A2-210ENST00000589561 RAPGEF2Q9Y4G8 1499 aa24.76■■□□□ 1.55
SLC44A2-210ENST00000589561 ATAD2BQ9ULI0 1458 aa24.75■■□□□ 1.55
SLC44A2-210ENST00000589561 VPS8Q8N3P4 1428 aa24.72■■□□□ 1.55
SLC44A2-210ENST00000589561 MIER1Q8N108 512 aa24.71■■□□□ 1.55
SLC44A2-210ENST00000589561 BAZ1BQ9UIG0 1483 aaKnown RBP24.69■■□□□ 1.54
SLC44A2-210ENST00000589561 APLP2Q06481 763 aa24.67■■□□□ 1.54
SLC44A2-210ENST00000589561 TOP2BQ02880 1626 aa24.51■■□□□ 1.51
SLC44A2-210ENST00000589561 KANK4Q5T7N3 995 aaPredicted RBP24.47■■□□□ 1.51
SLC44A2-210ENST00000589561 ARAP1Q96P48 1450 aa24.41■■□□□ 1.5
SLC44A2-210ENST00000589561 BIVM-ERCC5R4GMW8 1640 aa24.39■■□□□ 1.49
SLC44A2-210ENST00000589561 PRXQ9BXM0 1461 aa24.38■■□□□ 1.49
SLC44A2-210ENST00000589561 DHX57Q6P158 1386 aaKnown RBP24.37■■□□□ 1.49
SLC44A2-210ENST00000589561 ERICH3Q5RHP9 1530 aa24.31■■□□□ 1.48
SLC44A2-210ENST00000589561 MYT1Q01538 1121 aa24.31■■□□□ 1.48
SLC44A2-210ENST00000589561 CUX1P39880 1505 aa24.3■■□□□ 1.48
SLC44A2-210ENST00000589561 ITGAEP38570 1179 aa24.24■■□□□ 1.47
SLC44A2-210ENST00000589561 CLSPNQ9HAW4 1339 aa24.2■■□□□ 1.47
SLC44A2-210ENST00000589561 KIF27Q86VH2 1401 aa24.19■■□□□ 1.46
SLC44A2-210ENST00000589561 RRBP1Q9P2E9 1410 aaKnown RBP24.16■■□□□ 1.46
SLC44A2-210ENST00000589561 ARHGAP35Q9NRY4 1499 aa24.15■■□□□ 1.46
SLC44A2-210ENST00000589561 NCAPD3P42695 1498 aa24.14■■□□□ 1.46
SLC44A2-210ENST00000589561 CCNB3Q8WWL7 1395 aa24.1■■□□□ 1.45
SLC44A2-210ENST00000589561 HMGXB3Q12766 1538 aa24.1■■□□□ 1.45
SLC44A2-210ENST00000589561 CFTRP13569 1480 aa24.07■■□□□ 1.44
SLC44A2-210ENST00000589561 CUX2O14529 1486 aa24.01■■□□□ 1.43
SLC44A2-210ENST00000589561 IGF1RP08069 1367 aa23.99■■□□□ 1.43
SLC44A2-210ENST00000589561 RAB3GAP2Q9H2M9 1393 aa23.98■■□□□ 1.43
SLC44A2-210ENST00000589561 KCNH8Q96L42 1107 aa23.97■■□□□ 1.43
SLC44A2-210ENST00000589561 SUPT16HQ9Y5B9 1047 aaKnown RBP23.95■■□□□ 1.42
SLC44A2-210ENST00000589561 P3H3Q8IVL6 736 aa23.92■■□□□ 1.42
SLC44A2-210ENST00000589561 MAPKBP1O60336 1514 aa23.91■■□□□ 1.42
SLC44A2-210ENST00000589561 TIAM1Q13009 1591 aa23.88■■□□□ 1.41
SLC44A2-210ENST00000589561 SIN3AQ96ST3 1273 aa23.88■■□□□ 1.41
SLC44A2-210ENST00000589561 CARMIL1Q5VZK9 1371 aa23.88■■□□□ 1.41
SLC44A2-210ENST00000589561 PHLDB1Q86UU1 1377 aa23.86■■□□□ 1.41
SLC44A2-210ENST00000589561 FAM50AQ14320 339 aaKnown RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms