RNA–Protein interactions for RNA: ENST00000589302.1

CXXC1P1-203, Transcript of CXXC finger protein 1 pseudogene 1, humanhuman

TSL 3 BASIC

Gene CXXC1P1, Length 746 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1P1-203ENST00000589302 AEBP2Q6ZN18 517 aaPredicted RBP31.23■■■□□ 2.59
CXXC1P1-203ENST00000589302 CHIC1Q5VXU3 224 aa30.16■■■□□ 2.42
CXXC1P1-203ENST00000589302 PHF23Q9BUL5 403 aaPredicted RBP26.64■■□□□ 1.86
CXXC1P1-203ENST00000589302 SENP3Q9H4L4 574 aaPredicted RBP26.3■■□□□ 1.8
CXXC1P1-203ENST00000589302 FOXD1Q16676 465 aa24.61■■□□□ 1.53
CXXC1P1-203ENST00000589302 PLPPR3Q6T4P5 718 aa24.31■■□□□ 1.48
CXXC1P1-203ENST00000589302 PPP6R1Q9UPN7 881 aa23.61■■□□□ 1.37
CXXC1P1-203ENST00000589302 ADRA2BP18089 450 aa23.53■■□□□ 1.36
CXXC1P1-203ENST00000589302 PIAS4Q8N2W9 510 aaPredicted RBP23.06■■□□□ 1.28
CXXC1P1-203ENST00000589302 MSH5O43196 834 aa22.57■■□□□ 1.2
CXXC1P1-203ENST00000589302 PPP4R3CPQ6ZMV5 832 aa21.5■■□□□ 1.03
CXXC1P1-203ENST00000589302 MAPK8IP2Q13387 824 aaPredicted RBP21.47■■□□□ 1.03
CXXC1P1-203ENST00000589302 SCAF1Q9H7N4 1312 aaKnown RBP21.27■□□□□ 0.99
CXXC1P1-203ENST00000589302 POTEDQ86YR6 584 aa21.08■□□□□ 0.97
CXXC1P1-203ENST00000589302 DMRT2Q9Y5R5 561 aa21.02■□□□□ 0.96
CXXC1P1-203ENST00000589302 CNKSR2Q8WXI2 1034 aa20.86■□□□□ 0.93
CXXC1P1-203ENST00000589302 KCNA4P22459 653 aa20.83■□□□□ 0.93
CXXC1P1-203ENST00000589302 NCBP3Q53F19 620 aaKnown RBP20.71■□□□□ 0.91
CXXC1P1-203ENST00000589302 NPM3O75607 178 aaKnown RBP20.59■□□□□ 0.89
CXXC1P1-203ENST00000589302 HOXD11P31277 338 aaPredicted RBP20.51■□□□□ 0.87
CXXC1P1-203ENST00000589302 RNF216Q9NWF9 866 aaPredicted RBP20.5■□□□□ 0.87
CXXC1P1-203ENST00000589302 DCAF8L1A6NGE4 600 aa20.13■□□□□ 0.81
CXXC1P1-203ENST00000589302 DNAJC5BQ9UF47 199 aa19.88■□□□□ 0.77
CXXC1P1-203ENST00000589302 SLC4A1APQ9BWU0 796 aaKnown RBP19.7■□□□□ 0.74
CXXC1P1-203ENST00000589302 SLC4A2P04920 1241 aa19.55■□□□□ 0.72
CXXC1P1-203ENST00000589302 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.51■□□□□ 0.71
CXXC1P1-203ENST00000589302 RNF39Q9H2S5 420 aa19.42■□□□□ 0.7
CXXC1P1-203ENST00000589302 U3KPZ7 1027 aaPredicted RBP19.27■□□□□ 0.68
CXXC1P1-203ENST00000589302 ZBTB22O15209 634 aa19.23■□□□□ 0.67
CXXC1P1-203ENST00000589302 FOXD4L1Q9NU39 408 aa19.1■□□□□ 0.65
CXXC1P1-203ENST00000589302 C1QBPQ07021 282 aaKnown RBP19.09■□□□□ 0.65
CXXC1P1-203ENST00000589302 CACNB1Q02641 598 aaPredicted RBP19.04■□□□□ 0.64
CXXC1P1-203ENST00000589302 EHMT2Q96KQ7 1210 aa18.99■□□□□ 0.63
CXXC1P1-203ENST00000589302 MYCNP04198 464 aaPredicted RBP18.91■□□□□ 0.62
CXXC1P1-203ENST00000589302 CSRNP3Q8WYN3 585 aa18.9■□□□□ 0.62
CXXC1P1-203ENST00000589302 SPINK5Q9NQ38 1064 aaPredicted RBP18.84■□□□□ 0.61
CXXC1P1-203ENST00000589302 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.71■□□□□ 0.59
CXXC1P1-203ENST00000589302 HNRNPUL2Q1KMD3 747 aaKnown RBP18.71■□□□□ 0.59
CXXC1P1-203ENST00000589302 SAMD1Q6SPF0 538 aaPredicted RBP18.69■□□□□ 0.58
CXXC1P1-203ENST00000589302 CAPN15O75808 1086 aa18.66■□□□□ 0.58
CXXC1P1-203ENST00000589302 ATF5Q9Y2D1 282 aaPredicted RBP18.65■□□□□ 0.58
CXXC1P1-203ENST00000589302 TRHP20396 242 aaPredicted RBP18.56■□□□□ 0.56
CXXC1P1-203ENST00000589302 APLP2Q06481 763 aa18.51■□□□□ 0.55
CXXC1P1-203ENST00000589302 DSG3P32926 999 aa18.44■□□□□ 0.54
CXXC1P1-203ENST00000589302 ZNF219Q9P2Y4 722 aaPredicted RBP18.4■□□□□ 0.54
CXXC1P1-203ENST00000589302 ABCB7O75027 752 aa18.38■□□□□ 0.53
CXXC1P1-203ENST00000589302 ATXN8OSP0DMR3 200 aa18.38■□□□□ 0.53
CXXC1P1-203ENST00000589302 POLA2Q14181 598 aa18.22■□□□□ 0.51
CXXC1P1-203ENST00000589302 MKRN4PQ13434 485 aaPredicted RBP17.79■□□□□ 0.44
CXXC1P1-203ENST00000589302 ZBTB12Q9Y330 459 aaPredicted RBP17.68■□□□□ 0.42
CXXC1P1-203ENST00000589302 FBLN2P98095 1184 aa17.61■□□□□ 0.41
CXXC1P1-203ENST00000589302 OSCARQ8IYS5 282 aa17.61■□□□□ 0.41
CXXC1P1-203ENST00000589302 RBM42Q9BTD8 480 aaKnown RBP17.39■□□□□ 0.37
CXXC1P1-203ENST00000589302 SPDYE2BA6NHP3 402 aa17.29■□□□□ 0.36
CXXC1P1-203ENST00000589302 SPDYE6P0CI01 402 aa17.29■□□□□ 0.36
CXXC1P1-203ENST00000589302 SPDYE2Q495Y8 402 aa17.29■□□□□ 0.36
CXXC1P1-203ENST00000589302 ZNF692Q9BU19 519 aaPredicted RBP17.25■□□□□ 0.35
CXXC1P1-203ENST00000589302 AKT1S1Q96B36 256 aa17.21■□□□□ 0.35
CXXC1P1-203ENST00000589302 SSUH2Q9Y2M2 353 aa17.21■□□□□ 0.35
CXXC1P1-203ENST00000589302 SPDYE4A6NLX3 237 aa17.16■□□□□ 0.34
CXXC1P1-203ENST00000589302 REM2Q8IYK8 340 aaPredicted RBP17.14■□□□□ 0.33
CXXC1P1-203ENST00000589302 PABPN1Q86U42 306 aaKnown RBP eCLIP17.06■□□□□ 0.32
CXXC1P1-203ENST00000589302 FKBP8Q14318 412 aa17.04■□□□□ 0.32
CXXC1P1-203ENST00000589302 PITPNM1O00562 1244 aa16.96■□□□□ 0.31
CXXC1P1-203ENST00000589302 CHRDL2Q6WN34 429 aa16.88■□□□□ 0.29
CXXC1P1-203ENST00000589302 PROM2Q8N271 834 aa16.88■□□□□ 0.29
CXXC1P1-203ENST00000589302 CLEC11AQ9Y240 323 aa16.86■□□□□ 0.29
CXXC1P1-203ENST00000589302 SPDYE1Q8NFV5 336 aaPredicted RBP16.82■□□□□ 0.28
CXXC1P1-203ENST00000589302 PIP4P2Q8N4L2 257 aa16.67■□□□□ 0.26
CXXC1P1-203ENST00000589302 FXR2P51116 673 aaKnown RBP eCLIP16.66■□□□□ 0.26
CXXC1P1-203ENST00000589302 PRR29P0C7W0 189 aa16.62■□□□□ 0.25
CXXC1P1-203ENST00000589302 POTEHQ6S545 545 aa16.6■□□□□ 0.25
CXXC1P1-203ENST00000589302 STAG3Q9UJ98 1225 aa16.58■□□□□ 0.24
CXXC1P1-203ENST00000589302 CHADLQ6NUI6 762 aa16.56■□□□□ 0.24
CXXC1P1-203ENST00000589302 PRKAR2AP13861 404 aaKnown RBP16.51■□□□□ 0.23
CXXC1P1-203ENST00000589302 CREBZFQ9NS37 354 aa16.46■□□□□ 0.23
CXXC1P1-203ENST00000589302 FBXO3Q9UK99 471 aa16.32■□□□□ 0.2
CXXC1P1-203ENST00000589302 MIER1Q8N108 512 aa16.3■□□□□ 0.2
CXXC1P1-203ENST00000589302 MNX1P50219 401 aaPredicted RBP16.29■□□□□ 0.2
CXXC1P1-203ENST00000589302 FARP1Q9Y4F1 1045 aaPredicted RBP16.28■□□□□ 0.2
CXXC1P1-203ENST00000589302 VASPP50552 380 aaPredicted RBP16.22■□□□□ 0.19
CXXC1P1-203ENST00000589302 PLCD3Q8N3E9 789 aa16.21■□□□□ 0.19
CXXC1P1-203ENST00000589302 EVX2Q03828 476 aa16.19■□□□□ 0.18
CXXC1P1-203ENST00000589302 HAX1O00165 279 aa16.16■□□□□ 0.18
CXXC1P1-203ENST00000589302 C19orf67A6NJJ6 358 aa16.1■□□□□ 0.17
CXXC1P1-203ENST00000589302 IFNLR1Q8IU57 520 aaPredicted RBP16.08■□□□□ 0.16
CXXC1P1-203ENST00000589302 PLEKHG5O94827 1062 aa16.04■□□□□ 0.16
CXXC1P1-203ENST00000589302 NPM1P06748 294 aaKnown RBP eCLIP16.01■□□□□ 0.15
CXXC1P1-203ENST00000589302 CD44P16070 742 aaKnown RBP16■□□□□ 0.15
CXXC1P1-203ENST00000589302 KLHL34Q8N239 644 aa15.97■□□□□ 0.15
CXXC1P1-203ENST00000589302 NUBP1P53384 320 aa15.96■□□□□ 0.15
CXXC1P1-203ENST00000589302 RASEFQ8IZ41 740 aa15.96■□□□□ 0.15
CXXC1P1-203ENST00000589302 ZBTB47Q9UFB7 747 aaPredicted RBP15.91■□□□□ 0.14
CXXC1P1-203ENST00000589302 ZRANB1Q9UGI0 708 aa15.9■□□□□ 0.14
CXXC1P1-203ENST00000589302 TSPYL2Q9H2G4 693 aaPredicted RBP15.89■□□□□ 0.13
CXXC1P1-203ENST00000589302 SP7Q8TDD2 431 aaPredicted RBP15.85■□□□□ 0.13
CXXC1P1-203ENST00000589302 SPOCK2Q92563 424 aa15.8■□□□□ 0.12
CXXC1P1-203ENST00000589302 PHF12Q96QT6 1004 aa15.8■□□□□ 0.12
CXXC1P1-203ENST00000589302 CCDC61Q9Y6R9 512 aa15.77■□□□□ 0.12
CXXC1P1-203ENST00000589302 PAK3O75914 559 aaPredicted RBP15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms