RNA–Protein interactions for RNA: ENST00000589286.1

HMGN1P30-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 30, humanhuman

BASIC

Gene HMGN1P30, Length 268 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P30-201ENST00000589286 AEBP2Q6ZN18 517 aaPredicted RBP19.15■□□□□ 0.66
HMGN1P30-201ENST00000589286 CHIC1Q5VXU3 224 aa18.78■□□□□ 0.6
HMGN1P30-201ENST00000589286 PHF23Q9BUL5 403 aaPredicted RBP16.46■□□□□ 0.23
HMGN1P30-201ENST00000589286 SENP3Q9H4L4 574 aaPredicted RBP16.35■□□□□ 0.21
HMGN1P30-201ENST00000589286 PLPPR3Q6T4P5 718 aa15.31■□□□□ 0.04
HMGN1P30-201ENST00000589286 FOXD1Q16676 465 aa15.1■□□□□ 0.01
HMGN1P30-201ENST00000589286 ADRA2BP18089 450 aa14.54□□□□□ -0.08
HMGN1P30-201ENST00000589286 PPP6R1Q9UPN7 881 aa14.52□□□□□ -0.09
HMGN1P30-201ENST00000589286 PIAS4Q8N2W9 510 aaPredicted RBP14.3□□□□□ -0.12
HMGN1P30-201ENST00000589286 MSH5O43196 834 aa14□□□□□ -0.17
HMGN1P30-201ENST00000589286 PPP4R3CPQ6ZMV5 832 aa13.45□□□□□ -0.26
HMGN1P30-201ENST00000589286 SCAF1Q9H7N4 1312 aaKnown RBP13.41□□□□□ -0.26
HMGN1P30-201ENST00000589286 NCBP3Q53F19 620 aaKnown RBP13.18□□□□□ -0.3
HMGN1P30-201ENST00000589286 MAPK8IP2Q13387 824 aaPredicted RBP13.16□□□□□ -0.3
HMGN1P30-201ENST00000589286 KCNA4P22459 653 aa13.14□□□□□ -0.31
HMGN1P30-201ENST00000589286 CNKSR2Q8WXI2 1034 aa13.1□□□□□ -0.31
HMGN1P30-201ENST00000589286 DMRT2Q9Y5R5 561 aa13.02□□□□□ -0.33
HMGN1P30-201ENST00000589286 NPM3O75607 178 aaKnown RBP12.9□□□□□ -0.34
HMGN1P30-201ENST00000589286 RNF216Q9NWF9 866 aaPredicted RBP12.83□□□□□ -0.36
HMGN1P30-201ENST00000589286 HOXD11P31277 338 aaPredicted RBP12.74□□□□□ -0.37
HMGN1P30-201ENST00000589286 POTEDQ86YR6 584 aa12.65□□□□□ -0.38
HMGN1P30-201ENST00000589286 SLC4A1APQ9BWU0 796 aaKnown RBP12.57□□□□□ -0.4
HMGN1P30-201ENST00000589286 DCAF8L1A6NGE4 600 aa12.52□□□□□ -0.41
HMGN1P30-201ENST00000589286 DNAJC5BQ9UF47 199 aa12.52□□□□□ -0.41
HMGN1P30-201ENST00000589286 EHMT2Q96KQ7 1210 aa12.22□□□□□ -0.45
HMGN1P30-201ENST00000589286 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.22□□□□□ -0.45
HMGN1P30-201ENST00000589286 SLC4A2P04920 1241 aa12.14□□□□□ -0.47
HMGN1P30-201ENST00000589286 FOXD4L1Q9NU39 408 aa12.14□□□□□ -0.47
HMGN1P30-201ENST00000589286 ZBTB22O15209 634 aa12.05□□□□□ -0.48
HMGN1P30-201ENST00000589286 CSRNP3Q8WYN3 585 aa12.02□□□□□ -0.49
HMGN1P30-201ENST00000589286 MYCNP04198 464 aaPredicted RBP11.97□□□□□ -0.49
HMGN1P30-201ENST00000589286 RNF39Q9H2S5 420 aa11.95□□□□□ -0.5
HMGN1P30-201ENST00000589286 U3KPZ7 1027 aaPredicted RBP11.94□□□□□ -0.5
HMGN1P30-201ENST00000589286 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.92□□□□□ -0.5
HMGN1P30-201ENST00000589286 HNRNPUL2Q1KMD3 747 aaKnown RBP11.92□□□□□ -0.5
HMGN1P30-201ENST00000589286 C1QBPQ07021 282 aaKnown RBP11.85□□□□□ -0.51
HMGN1P30-201ENST00000589286 SAMD1Q6SPF0 538 aaPredicted RBP11.85□□□□□ -0.51
HMGN1P30-201ENST00000589286 APLP2Q06481 763 aa11.81□□□□□ -0.52
HMGN1P30-201ENST00000589286 ATXN8OSP0DMR3 200 aa11.73□□□□□ -0.53
HMGN1P30-201ENST00000589286 CACNB1Q02641 598 aaPredicted RBP11.68□□□□□ -0.54
HMGN1P30-201ENST00000589286 CAPN15O75808 1086 aa11.62□□□□□ -0.55
HMGN1P30-201ENST00000589286 SPINK5Q9NQ38 1064 aaPredicted RBP11.6□□□□□ -0.55
HMGN1P30-201ENST00000589286 ZNF219Q9P2Y4 722 aaPredicted RBP11.59□□□□□ -0.55
HMGN1P30-201ENST00000589286 TRHP20396 242 aaPredicted RBP11.57□□□□□ -0.56
HMGN1P30-201ENST00000589286 ATF5Q9Y2D1 282 aaPredicted RBP11.56□□□□□ -0.56
HMGN1P30-201ENST00000589286 DSG3P32926 999 aa11.37□□□□□ -0.59
HMGN1P30-201ENST00000589286 ABCB7O75027 752 aa11.36□□□□□ -0.59
HMGN1P30-201ENST00000589286 POLA2Q14181 598 aa11.36□□□□□ -0.59
HMGN1P30-201ENST00000589286 ZBTB12Q9Y330 459 aaPredicted RBP11.25□□□□□ -0.61
HMGN1P30-201ENST00000589286 FBLN2P98095 1184 aa11.21□□□□□ -0.61
HMGN1P30-201ENST00000589286 MKRN4PQ13434 485 aaPredicted RBP11.06□□□□□ -0.64
HMGN1P30-201ENST00000589286 OSCARQ8IYS5 282 aa10.97□□□□□ -0.65
HMGN1P30-201ENST00000589286 FKBP8Q14318 412 aa10.92□□□□□ -0.66
HMGN1P30-201ENST00000589286 RBM42Q9BTD8 480 aaKnown RBP10.92□□□□□ -0.66
HMGN1P30-201ENST00000589286 SPDYE2BA6NHP3 402 aa10.91□□□□□ -0.66
HMGN1P30-201ENST00000589286 SPDYE6P0CI01 402 aa10.91□□□□□ -0.66
HMGN1P30-201ENST00000589286 SPDYE2Q495Y8 402 aa10.91□□□□□ -0.66
HMGN1P30-201ENST00000589286 SPDYE4A6NLX3 237 aa10.9□□□□□ -0.66
HMGN1P30-201ENST00000589286 ZNF692Q9BU19 519 aaPredicted RBP10.87□□□□□ -0.67
HMGN1P30-201ENST00000589286 SSUH2Q9Y2M2 353 aa10.78□□□□□ -0.68
HMGN1P30-201ENST00000589286 AKT1S1Q96B36 256 aa10.76□□□□□ -0.69
HMGN1P30-201ENST00000589286 PABPN1Q86U42 306 aaKnown RBP eCLIP10.71□□□□□ -0.69
HMGN1P30-201ENST00000589286 PROM2Q8N271 834 aa10.66□□□□□ -0.7
HMGN1P30-201ENST00000589286 REM2Q8IYK8 340 aaPredicted RBP10.62□□□□□ -0.71
HMGN1P30-201ENST00000589286 SPDYE1Q8NFV5 336 aaPredicted RBP10.6□□□□□ -0.71
HMGN1P30-201ENST00000589286 FBXO3Q9UK99 471 aa10.6□□□□□ -0.71
HMGN1P30-201ENST00000589286 STAG3Q9UJ98 1225 aa10.59□□□□□ -0.71
HMGN1P30-201ENST00000589286 CLEC11AQ9Y240 323 aa10.54□□□□□ -0.72
HMGN1P30-201ENST00000589286 PITPNM1O00562 1244 aa10.49□□□□□ -0.73
HMGN1P30-201ENST00000589286 PRR29P0C7W0 189 aa10.45□□□□□ -0.74
HMGN1P30-201ENST00000589286 CHRDL2Q6WN34 429 aa10.41□□□□□ -0.74
HMGN1P30-201ENST00000589286 PLEKHG5O94827 1062 aa10.39□□□□□ -0.75
HMGN1P30-201ENST00000589286 VASPP50552 380 aaPredicted RBP10.38□□□□□ -0.75
HMGN1P30-201ENST00000589286 PLCD3Q8N3E9 789 aa10.37□□□□□ -0.75
HMGN1P30-201ENST00000589286 MIER1Q8N108 512 aa10.36□□□□□ -0.75
HMGN1P30-201ENST00000589286 ZBTB47Q9UFB7 747 aaPredicted RBP10.29□□□□□ -0.76
HMGN1P30-201ENST00000589286 FXR2P51116 673 aaKnown RBP eCLIP10.28□□□□□ -0.76
HMGN1P30-201ENST00000589286 KLHL34Q8N239 644 aa10.26□□□□□ -0.77
HMGN1P30-201ENST00000589286 CREBZFQ9NS37 354 aa10.26□□□□□ -0.77
HMGN1P30-201ENST00000589286 PRKAR2AP13861 404 aaKnown RBP10.25□□□□□ -0.77
HMGN1P30-201ENST00000589286 PIP4P2Q8N4L2 257 aa10.25□□□□□ -0.77
HMGN1P30-201ENST00000589286 CHADLQ6NUI6 762 aa10.23□□□□□ -0.77
HMGN1P30-201ENST00000589286 IFNLR1Q8IU57 520 aaPredicted RBP10.21□□□□□ -0.77
HMGN1P30-201ENST00000589286 NPM1P06748 294 aaKnown RBP eCLIP10.19□□□□□ -0.78
HMGN1P30-201ENST00000589286 FARP1Q9Y4F1 1045 aaPredicted RBP10.16□□□□□ -0.78
HMGN1P30-201ENST00000589286 SPOCK2Q92563 424 aa10.15□□□□□ -0.78
HMGN1P30-201ENST00000589286 MNX1P50219 401 aaPredicted RBP10.12□□□□□ -0.79
HMGN1P30-201ENST00000589286 POTEHQ6S545 545 aa10.06□□□□□ -0.8
HMGN1P30-201ENST00000589286 PAK3O75914 559 aaPredicted RBP10.03□□□□□ -0.8
HMGN1P30-201ENST00000589286 NUBP1P53384 320 aa10.03□□□□□ -0.8
HMGN1P30-201ENST00000589286 FAM212AQ96EL1 285 aa10.03□□□□□ -0.8
HMGN1P30-201ENST00000589286 AMER1Q5JTC6 1135 aaPredicted RBP10.02□□□□□ -0.81
HMGN1P30-201ENST00000589286 GSE1Q14687 1217 aa10□□□□□ -0.81
HMGN1P30-201ENST00000589286 DCAF8Q5TAQ9 597 aa10□□□□□ -0.81
HMGN1P30-201ENST00000589286 CIZ1Q9ULV3 898 aaPredicted RBP10□□□□□ -0.81
HMGN1P30-201ENST00000589286 RASEFQ8IZ41 740 aa9.99□□□□□ -0.81
HMGN1P30-201ENST00000589286 HAX1O00165 279 aa9.97□□□□□ -0.81
HMGN1P30-201ENST00000589286 CD44P16070 742 aaKnown RBP9.97□□□□□ -0.81
HMGN1P30-201ENST00000589286 TSPYL2Q9H2G4 693 aaPredicted RBP9.97□□□□□ -0.81
HMGN1P30-201ENST00000589286 C19orf67A6NJJ6 358 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms