RNA–Protein interactions for RNA: ENST00000588993.1

ZNF260-203, Transcript of zinc finger protein 260, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF260, Length 4,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF260-203ENST00000588993 AEBP2Q6ZN18 517 aaPredicted RBP6.35□□□□□ -1.39
ZNF260-203ENST00000588993 POTEDQ86YR6 584 aa6.01□□□□□ -1.45
ZNF260-203ENST00000588993 CHIC1Q5VXU3 224 aa5.85□□□□□ -1.47
ZNF260-203ENST00000588993 SENP3Q9H4L4 574 aaPredicted RBP5.48□□□□□ -1.53
ZNF260-203ENST00000588993 SHROOM4Q9ULL8 1493 aa5.25□□□□□ -1.57
ZNF260-203ENST00000588993 PHF23Q9BUL5 403 aaPredicted RBP5.18□□□□□ -1.58
ZNF260-203ENST00000588993 CCDC180Q9P1Z9 1646 aa5.12□□□□□ -1.59
ZNF260-203ENST00000588993 FOXD1Q16676 465 aa5.08□□□□□ -1.6
ZNF260-203ENST00000588993 MSH5O43196 834 aa5.05□□□□□ -1.6
ZNF260-203ENST00000588993 MYO15BQ96JP2 1530 aa4.94□□□□□ -1.62
ZNF260-203ENST00000588993 DNAJC5BQ9UF47 199 aa4.82□□□□□ -1.64
ZNF260-203ENST00000588993 NISCHQ9Y2I1 1504 aa4.72□□□□□ -1.65
ZNF260-203ENST00000588993 CUX2O14529 1486 aa4.7□□□□□ -1.66
ZNF260-203ENST00000588993 BAZ1BQ9UIG0 1483 aaKnown RBP4.68□□□□□ -1.66
ZNF260-203ENST00000588993 NACADO15069 1562 aa4.63□□□□□ -1.67
ZNF260-203ENST00000588993 RB1CC1Q8TDY2 1594 aa4.6□□□□□ -1.67
ZNF260-203ENST00000588993 DCAF1Q9Y4B6 1507 aa4.52□□□□□ -1.69
ZNF260-203ENST00000588993 WDR97A6NE52 1622 aa4.47□□□□□ -1.69
ZNF260-203ENST00000588993 DMRT2Q9Y5R5 561 aa4.46□□□□□ -1.7
ZNF260-203ENST00000588993 DNAJC5Q9H3Z4 198 aa4.46□□□□□ -1.7
ZNF260-203ENST00000588993 POTEHQ6S545 545 aa4.45□□□□□ -1.7
ZNF260-203ENST00000588993 UNC13AQ9UPW8 1703 aa4.43□□□□□ -1.7
ZNF260-203ENST00000588993 SMARCA2P51531 1590 aa4.35□□□□□ -1.71
ZNF260-203ENST00000588993 PPP6R1Q9UPN7 881 aa4.33□□□□□ -1.72
ZNF260-203ENST00000588993 ABCC9O60706 1549 aa4.33□□□□□ -1.72
ZNF260-203ENST00000588993 RNF39Q9H2S5 420 aa4.33□□□□□ -1.72
ZNF260-203ENST00000588993 PIAS4Q8N2W9 510 aaPredicted RBP4.3□□□□□ -1.72
ZNF260-203ENST00000588993 HOXD11P31277 338 aaPredicted RBP4.29□□□□□ -1.72
ZNF260-203ENST00000588993 BICRAQ9NZM4 1560 aa4.28□□□□□ -1.72
ZNF260-203ENST00000588993 PLPPR3Q6T4P5 718 aa4.28□□□□□ -1.72
ZNF260-203ENST00000588993 CACNB1Q02641 598 aaPredicted RBP4.25□□□□□ -1.73
ZNF260-203ENST00000588993 PRDM2Q13029 1718 aa4.24□□□□□ -1.73
ZNF260-203ENST00000588993 ERCC6L2Q5T890 1561 aa4.24□□□□□ -1.73
ZNF260-203ENST00000588993 HMGXB3Q12766 1538 aa4.23□□□□□ -1.73
ZNF260-203ENST00000588993 THOC2Q8NI27 1593 aaKnown RBP4.22□□□□□ -1.73
ZNF260-203ENST00000588993 C1QBPQ07021 282 aaKnown RBP4.22□□□□□ -1.73
ZNF260-203ENST00000588993 PEG3Q9GZU2 1588 aa4.21□□□□□ -1.74
ZNF260-203ENST00000588993 LAMC3Q9Y6N6 1575 aa4.18□□□□□ -1.74
ZNF260-203ENST00000588993 KDM6BO15054 1643 aa4.15□□□□□ -1.74
ZNF260-203ENST00000588993 CC2D2AQ9P2K1 1620 aa4.15□□□□□ -1.75
ZNF260-203ENST00000588993 EIF4G1Q04637 1599 aaKnown RBP4.12□□□□□ -1.75
ZNF260-203ENST00000588993 IQSEC2Q5JU85 1478 aa4.11□□□□□ -1.75
ZNF260-203ENST00000588993 WDR62O43379 1518 aa4.11□□□□□ -1.75
ZNF260-203ENST00000588993 ADRA2BP18089 450 aa4.1□□□□□ -1.75
ZNF260-203ENST00000588993 BAZ1AQ9NRL2 1556 aaPredicted RBP4.08□□□□□ -1.76
ZNF260-203ENST00000588993 CECR2Q9BXF3 1484 aa4.06□□□□□ -1.76
ZNF260-203ENST00000588993 RSF1Q96T23 1441 aaPredicted RBP4.05□□□□□ -1.76
ZNF260-203ENST00000588993 RNF216Q9NWF9 866 aaPredicted RBP4.03□□□□□ -1.76
ZNF260-203ENST00000588993 NCAPD3P42695 1498 aa4.03□□□□□ -1.76
ZNF260-203ENST00000588993 SCAF1Q9H7N4 1312 aaKnown RBP3.98□□□□□ -1.77
ZNF260-203ENST00000588993 RIMBP3CA6NJZ7 1639 aa3.94□□□□□ -1.78
ZNF260-203ENST00000588993 RIMBP3BA6NNM3 1639 aa3.94□□□□□ -1.78
ZNF260-203ENST00000588993 RIMBP3Q9UFD9 1639 aa3.94□□□□□ -1.78
ZNF260-203ENST00000588993 PABPN1Q86U42 306 aaKnown RBP eCLIP3.94□□□□□ -1.78
ZNF260-203ENST00000588993 SMARCA4P51532 1647 aa3.93□□□□□ -1.78
ZNF260-203ENST00000588993 GLI2P10070 1586 aa3.92□□□□□ -1.78
ZNF260-203ENST00000588993 ABCC8Q09428 1581 aa3.92□□□□□ -1.78
ZNF260-203ENST00000588993 TOP2BQ02880 1626 aa3.92□□□□□ -1.78
ZNF260-203ENST00000588993 SP7Q8TDD2 431 aaPredicted RBP3.91□□□□□ -1.78
ZNF260-203ENST00000588993 NESP48681 1621 aa3.91□□□□□ -1.78
ZNF260-203ENST00000588993 CLASP1Q7Z460 1538 aa3.9□□□□□ -1.78
ZNF260-203ENST00000588993 SHROOM2Q13796 1616 aa3.89□□□□□ -1.79
ZNF260-203ENST00000588993 KIAA0586Q9BVV6 1533 aa3.89□□□□□ -1.79
ZNF260-203ENST00000588993 ERCC6Q03468 1493 aa3.89□□□□□ -1.79
ZNF260-203ENST00000588993 MAPK8IP2Q13387 824 aaPredicted RBP3.88□□□□□ -1.79
ZNF260-203ENST00000588993 PCDH10Q9P2E7 1040 aa3.87□□□□□ -1.79
ZNF260-203ENST00000588993 TRIM41Q8WV44 630 aa3.86□□□□□ -1.79
ZNF260-203ENST00000588993 MRC2Q9UBG0 1479 aa3.86□□□□□ -1.79
ZNF260-203ENST00000588993 MAPKBP1O60336 1514 aa3.86□□□□□ -1.79
ZNF260-203ENST00000588993 CNKSR2Q8WXI2 1034 aa3.82□□□□□ -1.8
ZNF260-203ENST00000588993 KIF21AQ7Z4S6 1674 aa3.81□□□□□ -1.8
ZNF260-203ENST00000588993 DSG3P32926 999 aa3.8□□□□□ -1.8
ZNF260-203ENST00000588993 KIF13AQ9H1H9 1805 aa3.8□□□□□ -1.8
ZNF260-203ENST00000588993 PDS5BQ9NTI5 1447 aa3.78□□□□□ -1.8
ZNF260-203ENST00000588993 ZNF608Q9ULD9 1512 aaPredicted RBP3.78□□□□□ -1.8
ZNF260-203ENST00000588993 ZCCHC6Q5VYS8 1495 aaKnown RBP3.78□□□□□ -1.8
ZNF260-203ENST00000588993 FAM135AQ9P2D6 1515 aa3.77□□□□□ -1.81
ZNF260-203ENST00000588993 PBRM1Q86U86 1689 aa3.77□□□□□ -1.81
ZNF260-203ENST00000588993 OSCARQ8IYS5 282 aa3.77□□□□□ -1.81
ZNF260-203ENST00000588993 IFT140Q96RY7 1462 aa3.76□□□□□ -1.81
ZNF260-203ENST00000588993 SYNJ1O43426 1573 aa3.76□□□□□ -1.81
ZNF260-203ENST00000588993 ARHGEF11O15085 1522 aa3.75□□□□□ -1.81
ZNF260-203ENST00000588993 LMTK3Q96Q04 1460 aa3.75□□□□□ -1.81
ZNF260-203ENST00000588993 ILDR1Q86SU0 546 aaPredicted RBP3.73□□□□□ -1.81
ZNF260-203ENST00000588993 MAGI1Q96QZ7 1491 aaPredicted RBP3.69□□□□□ -1.82
ZNF260-203ENST00000588993 REREQ9P2R6 1566 aa3.69□□□□□ -1.82
ZNF260-203ENST00000588993 CHD1O14646 1710 aa3.69□□□□□ -1.82
ZNF260-203ENST00000588993 PHLDB1Q86UU1 1377 aa3.68□□□□□ -1.82
ZNF260-203ENST00000588993 SPATA31D1Q6ZQQ2 1576 aa3.68□□□□□ -1.82
ZNF260-203ENST00000588993 TARBP1Q13395 1621 aaKnown RBP3.68□□□□□ -1.82
ZNF260-203ENST00000588993 ADAMTSL3P82987 1691 aa3.68□□□□□ -1.82
ZNF260-203ENST00000588993 CLCN6P51797 869 aa3.68□□□□□ -1.82
ZNF260-203ENST00000588993 FBXO41Q8TF61 875 aa3.68□□□□□ -1.82
ZNF260-203ENST00000588993 SCRIBQ14160 1630 aa3.68□□□□□ -1.82
ZNF260-203ENST00000588993 MAP3K4Q9Y6R4 1608 aa3.68□□□□□ -1.82
ZNF260-203ENST00000588993 SOCS7O14512 581 aa3.66□□□□□ -1.82
ZNF260-203ENST00000588993 CFAP43Q8NDM7 1665 aa3.66□□□□□ -1.82
ZNF260-203ENST00000588993 LRP5O75197 1615 aa3.65□□□□□ -1.82
ZNF260-203ENST00000588993 FXR2P51116 673 aaKnown RBP eCLIP3.65□□□□□ -1.82
ZNF260-203ENST00000588993 CFAP74Q9C0B2 1584 aa3.65□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms