RNA–Protein interactions for RNA: ENST00000588874.5

BCAS3-221, Transcript of BCAS3, microtubule associated cell migration factor, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene BCAS3, Length 2,948 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3-221ENST00000588874 NISCHQ9Y2I1 1504 aa27.92■■■□□ 2.06
BCAS3-221ENST00000588874 SHROOM4Q9ULL8 1493 aa24.36■■□□□ 1.49
BCAS3-221ENST00000588874 SUPT5HO00267 1087 aaKnown RBP23.87■■□□□ 1.41
BCAS3-221ENST00000588874 DCAF8L2P0C7V8 631 aa23.84■■□□□ 1.41
BCAS3-221ENST00000588874 ZCCHC6Q5VYS8 1495 aaKnown RBP23.55■■□□□ 1.36
BCAS3-221ENST00000588874 CCDC180Q9P1Z9 1646 aa23.45■■□□□ 1.34
BCAS3-221ENST00000588874 CHIC1Q5VXU3 224 aa22.98■■□□□ 1.27
BCAS3-221ENST00000588874 MYO15BQ96JP2 1530 aa22.88■■□□□ 1.25
BCAS3-221ENST00000588874 DCAF1Q9Y4B6 1507 aa22.62■■□□□ 1.21
BCAS3-221ENST00000588874 LOC105371045A0A1W2PR82 267 aa22.54■■□□□ 1.2
BCAS3-221ENST00000588874 PCGF6Q9BYE7 350 aa22.42■■□□□ 1.18
BCAS3-221ENST00000588874 SCRIBQ14160 1630 aa22.42■■□□□ 1.18
BCAS3-221ENST00000588874 ABCC9O60706 1549 aa22.33■■□□□ 1.17
BCAS3-221ENST00000588874 RSF1Q96T23 1441 aaPredicted RBP22.21■■□□□ 1.15
BCAS3-221ENST00000588874 EHMT2Q96KQ7 1210 aa22.19■■□□□ 1.14
BCAS3-221ENST00000588874 HRCP23327 699 aa22.16■■□□□ 1.14
BCAS3-221ENST00000588874 FAM9AQ8IZU1 332 aaPredicted RBP22.16■■□□□ 1.14
BCAS3-221ENST00000588874 PPARGC1BQ86YN6 1023 aaKnown RBP22.06■■□□□ 1.12
BCAS3-221ENST00000588874 TRIM41Q8WV44 630 aa22.06■■□□□ 1.12
BCAS3-221ENST00000588874 CECR2Q9BXF3 1484 aa22.02■■□□□ 1.12
BCAS3-221ENST00000588874 RB1CC1Q8TDY2 1594 aa21.98■■□□□ 1.11
BCAS3-221ENST00000588874 MROH2BQ7Z745 1585 aa21.85■■□□□ 1.09
BCAS3-221ENST00000588874 NACADO15069 1562 aa21.81■■□□□ 1.08
BCAS3-221ENST00000588874 TRIM26Q12899 539 aaPredicted RBP21.73■■□□□ 1.07
BCAS3-221ENST00000588874 WIZO95785 1651 aa21.72■■□□□ 1.07
BCAS3-221ENST00000588874 PELP1Q8IZL8 1130 aaKnown RBP21.63■■□□□ 1.05
BCAS3-221ENST00000588874 PABPN1Q86U42 306 aaKnown RBP eCLIP21.56■■□□□ 1.04
BCAS3-221ENST00000588874 TTBK1Q5TCY1 1321 aaPredicted RBP21.4■■□□□ 1.02
BCAS3-221ENST00000588874 BAZ1AQ9NRL2 1556 aaPredicted RBP21.38■■□□□ 1.01
BCAS3-221ENST00000588874 ABCC8Q09428 1581 aa21.33■■□□□ 1.01
BCAS3-221ENST00000588874 CCDC88BA6NC98 1476 aa21.29■■□□□ 1
BCAS3-221ENST00000588874 UNC13AQ9UPW8 1703 aa21.25■□□□□ 0.99
BCAS3-221ENST00000588874 SMARCA4P51532 1647 aa21.24■□□□□ 0.99
BCAS3-221ENST00000588874 MYT1Q01538 1121 aa21.18■□□□□ 0.98
BCAS3-221ENST00000588874 TOP2AP11388 1531 aaKnown RBP21.18■□□□□ 0.98
BCAS3-221ENST00000588874 SOGA1O94964 1423 aa21.17■□□□□ 0.98
BCAS3-221ENST00000588874 EIF4G1Q04637 1599 aaKnown RBP21.17■□□□□ 0.98
BCAS3-221ENST00000588874 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.15■□□□□ 0.98
BCAS3-221ENST00000588874 SMARCA2P51531 1590 aa21.14■□□□□ 0.98
BCAS3-221ENST00000588874 RUSC2Q8N2Y8 1516 aa21.1■□□□□ 0.97
BCAS3-221ENST00000588874 UBTFP17480 764 aaKnown RBP21.08■□□□□ 0.97
BCAS3-221ENST00000588874 ZEB1P37275 1124 aaPredicted RBP21.05■□□□□ 0.96
BCAS3-221ENST00000588874 BICRAQ9NZM4 1560 aa21.04■□□□□ 0.96
BCAS3-221ENST00000588874 CSRNP3Q8WYN3 585 aa21.01■□□□□ 0.95
BCAS3-221ENST00000588874 RANGAP1P46060 587 aaPredicted RBP20.98■□□□□ 0.95
BCAS3-221ENST00000588874 CCER1Q8TC90 406 aaPredicted RBP20.98■□□□□ 0.95
BCAS3-221ENST00000588874 CEP162Q5TB80 1403 aa20.94■□□□□ 0.94
BCAS3-221ENST00000588874 SCAF1Q9H7N4 1312 aaKnown RBP20.9■□□□□ 0.94
BCAS3-221ENST00000588874 WRNQ14191 1432 aaPredicted RBP eCLIP20.85■□□□□ 0.93
BCAS3-221ENST00000588874 TNIKQ9UKE5 1360 aa20.81■□□□□ 0.92
BCAS3-221ENST00000588874 ATAD2BQ9ULI0 1458 aa20.79■□□□□ 0.92
BCAS3-221ENST00000588874 BAZ1BQ9UIG0 1483 aaKnown RBP20.74■□□□□ 0.91
BCAS3-221ENST00000588874 SYNJ1O43426 1573 aa20.73■□□□□ 0.91
BCAS3-221ENST00000588874 HNRNPUL2Q1KMD3 747 aaKnown RBP20.69■□□□□ 0.9
BCAS3-221ENST00000588874 GOLGA3Q08378 1498 aa20.67■□□□□ 0.9
BCAS3-221ENST00000588874 PEG3Q9GZU2 1588 aa20.66■□□□□ 0.9
BCAS3-221ENST00000588874 EEA1Q15075 1411 aa20.66■□□□□ 0.9
BCAS3-221ENST00000588874 RAPGEF2Q9Y4G8 1499 aa20.58■□□□□ 0.88
BCAS3-221ENST00000588874 CLIP1P30622 1438 aa20.56■□□□□ 0.88
BCAS3-221ENST00000588874 CEP164Q9UPV0 1460 aa20.54■□□□□ 0.88
BCAS3-221ENST00000588874 DIEXFQ68CQ4 756 aaKnown RBP20.5■□□□□ 0.87
BCAS3-221ENST00000588874 APLP2Q06481 763 aa20.48■□□□□ 0.87
BCAS3-221ENST00000588874 KIF21BO75037 1637 aa20.39■□□□□ 0.85
BCAS3-221ENST00000588874 VPS8Q8N3P4 1428 aa20.37■□□□□ 0.85
BCAS3-221ENST00000588874 NEUROD1Q13562 356 aa20.36■□□□□ 0.85
BCAS3-221ENST00000588874 KANK4Q5T7N3 995 aaPredicted RBP20.34■□□□□ 0.85
BCAS3-221ENST00000588874 TOP2BQ02880 1626 aa20.34■□□□□ 0.85
BCAS3-221ENST00000588874 ACIN1Q9UKV3 1341 aaKnown RBP20.33■□□□□ 0.85
BCAS3-221ENST00000588874 NCAPD3P42695 1498 aa20.3■□□□□ 0.84
BCAS3-221ENST00000588874 CUX1P39880 1505 aa20.29■□□□□ 0.84
BCAS3-221ENST00000588874 ZNF316A6NFI3 1004 aaPredicted RBP20.27■□□□□ 0.84
BCAS3-221ENST00000588874 YTHDC1Q96MU7 727 aaKnown RBP20.26■□□□□ 0.83
BCAS3-221ENST00000588874 ITGAEP38570 1179 aa20.25■□□□□ 0.83
BCAS3-221ENST00000588874 GTF3C3Q9Y5Q9 886 aa20.23■□□□□ 0.83
BCAS3-221ENST00000588874 PRXQ9BXM0 1461 aa20.21■□□□□ 0.83
BCAS3-221ENST00000588874 BIVM-ERCC5R4GMW8 1640 aa20.19■□□□□ 0.82
BCAS3-221ENST00000588874 ARAP1Q96P48 1450 aa20.18■□□□□ 0.82
BCAS3-221ENST00000588874 KIF27Q86VH2 1401 aa20.17■□□□□ 0.82
BCAS3-221ENST00000588874 CFTRP13569 1480 aa20.17■□□□□ 0.82
BCAS3-221ENST00000588874 HMGXB3Q12766 1538 aa20.16■□□□□ 0.82
BCAS3-221ENST00000588874 P3H3Q8IVL6 736 aa20.14■□□□□ 0.82
BCAS3-221ENST00000588874 MIER1Q8N108 512 aa20.14■□□□□ 0.82
BCAS3-221ENST00000588874 CENPBP07199 599 aaPredicted RBP20.12■□□□□ 0.81
BCAS3-221ENST00000588874 ATP1B4Q9UN42 357 aaPredicted RBP20.09■□□□□ 0.81
BCAS3-221ENST00000588874 CUX2O14529 1486 aa20.09■□□□□ 0.81
BCAS3-221ENST00000588874 IGF1RP08069 1367 aa20.06■□□□□ 0.8
BCAS3-221ENST00000588874 ERICH3Q5RHP9 1530 aa20.06■□□□□ 0.8
BCAS3-221ENST00000588874 CADPSQ9ULU8 1353 aa20.03■□□□□ 0.8
BCAS3-221ENST00000588874 ARHGAP35Q9NRY4 1499 aa20.03■□□□□ 0.8
BCAS3-221ENST00000588874 DHX57Q6P158 1386 aaKnown RBP19.99■□□□□ 0.79
BCAS3-221ENST00000588874 CARMIL1Q5VZK9 1371 aa19.97■□□□□ 0.79
BCAS3-221ENST00000588874 FGD5Q6ZNL6 1462 aa19.96■□□□□ 0.79
BCAS3-221ENST00000588874 DNAJC5BQ9UF47 199 aa19.93■□□□□ 0.78
BCAS3-221ENST00000588874 RAD54L2Q9Y4B4 1467 aa19.91■□□□□ 0.78
BCAS3-221ENST00000588874 NESP48681 1621 aa19.91■□□□□ 0.78
BCAS3-221ENST00000588874 CC2D2AQ9P2K1 1620 aa19.91■□□□□ 0.78
BCAS3-221ENST00000588874 CCNB3Q8WWL7 1395 aa19.9■□□□□ 0.78
BCAS3-221ENST00000588874 FAM50AQ14320 339 aaKnown RBP19.89■□□□□ 0.78
BCAS3-221ENST00000588874 FANCD2Q9BXW9 1451 aa19.85■□□□□ 0.77
BCAS3-221ENST00000588874 RRBP1Q9P2E9 1410 aaKnown RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms