RNA–Protein interactions for RNA: ENST00000586851.5

CAPNS1-202, Transcript of calpain small subunit 1, humanhuman

TSL 3

Gene CAPNS1, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-202ENST00000586851 NISCHQ9Y2I1 1504 aa15.58■□□□□ 0.08
CAPNS1-202ENST00000586851 AEBP2Q6ZN18 517 aaPredicted RBP13.46□□□□□ -0.25
CAPNS1-202ENST00000586851 CCDC180Q9P1Z9 1646 aa13.44□□□□□ -0.26
CAPNS1-202ENST00000586851 ZCCHC6Q5VYS8 1495 aaKnown RBP13.25□□□□□ -0.29
CAPNS1-202ENST00000586851 CHIC1Q5VXU3 224 aa13.17□□□□□ -0.3
CAPNS1-202ENST00000586851 DCAF1Q9Y4B6 1507 aa13.06□□□□□ -0.32
CAPNS1-202ENST00000586851 SHROOM4Q9ULL8 1493 aa12.88□□□□□ -0.35
CAPNS1-202ENST00000586851 SUPT5HO00267 1087 aaKnown RBP12.79□□□□□ -0.36
CAPNS1-202ENST00000586851 HRCP23327 699 aa12.7□□□□□ -0.38
CAPNS1-202ENST00000586851 MYO15BQ96JP2 1530 aa12.68□□□□□ -0.38
CAPNS1-202ENST00000586851 ABCC9O60706 1549 aa12.57□□□□□ -0.4
CAPNS1-202ENST00000586851 ZEB1P37275 1124 aaPredicted RBP12.43□□□□□ -0.42
CAPNS1-202ENST00000586851 TRIM26Q12899 539 aaPredicted RBP12.37□□□□□ -0.43
CAPNS1-202ENST00000586851 RB1CC1Q8TDY2 1594 aa12.36□□□□□ -0.43
CAPNS1-202ENST00000586851 DCAF8L2P0C7V8 631 aa12.35□□□□□ -0.43
CAPNS1-202ENST00000586851 PCGF6Q9BYE7 350 aa12.35□□□□□ -0.43
CAPNS1-202ENST00000586851 NACADO15069 1562 aa12.3□□□□□ -0.44
CAPNS1-202ENST00000586851 RSF1Q96T23 1441 aaPredicted RBP12.28□□□□□ -0.44
CAPNS1-202ENST00000586851 PELP1Q8IZL8 1130 aaKnown RBP12.22□□□□□ -0.45
CAPNS1-202ENST00000586851 SCRIBQ14160 1630 aa12.19□□□□□ -0.46
CAPNS1-202ENST00000586851 TRIM41Q8WV44 630 aa12.12□□□□□ -0.47
CAPNS1-202ENST00000586851 BAZ1AQ9NRL2 1556 aaPredicted RBP12.09□□□□□ -0.47
CAPNS1-202ENST00000586851 LOC105371045A0A1W2PR82 267 aa12.07□□□□□ -0.48
CAPNS1-202ENST00000586851 EIF4G1Q04637 1599 aaKnown RBP11.98□□□□□ -0.49
CAPNS1-202ENST00000586851 EEA1Q15075 1411 aa11.98□□□□□ -0.49
CAPNS1-202ENST00000586851 PPARGC1BQ86YN6 1023 aaKnown RBP11.98□□□□□ -0.49
CAPNS1-202ENST00000586851 MROH2BQ7Z745 1585 aa11.96□□□□□ -0.5
CAPNS1-202ENST00000586851 WRNQ14191 1432 aaPredicted RBP eCLIP11.94□□□□□ -0.5
CAPNS1-202ENST00000586851 TOP2AP11388 1531 aaKnown RBP11.93□□□□□ -0.5
CAPNS1-202ENST00000586851 WIZO95785 1651 aa11.9□□□□□ -0.5
CAPNS1-202ENST00000586851 CECR2Q9BXF3 1484 aa11.88□□□□□ -0.51
CAPNS1-202ENST00000586851 SMARCA4P51532 1647 aa11.84□□□□□ -0.51
CAPNS1-202ENST00000586851 MYT1Q01538 1121 aa11.83□□□□□ -0.52
CAPNS1-202ENST00000586851 TNIKQ9UKE5 1360 aa11.79□□□□□ -0.52
CAPNS1-202ENST00000586851 SMARCA2P51531 1590 aa11.78□□□□□ -0.52
CAPNS1-202ENST00000586851 PEG3Q9GZU2 1588 aa11.76□□□□□ -0.53
CAPNS1-202ENST00000586851 CENPBP07199 599 aaPredicted RBP11.76□□□□□ -0.53
CAPNS1-202ENST00000586851 GOLGA3Q08378 1498 aa11.72□□□□□ -0.53
CAPNS1-202ENST00000586851 CEP162Q5TB80 1403 aa11.71□□□□□ -0.53
CAPNS1-202ENST00000586851 FAM9AQ8IZU1 332 aaPredicted RBP11.71□□□□□ -0.53
CAPNS1-202ENST00000586851 KIF21BO75037 1637 aa11.71□□□□□ -0.54
CAPNS1-202ENST00000586851 CCDC88BA6NC98 1476 aa11.7□□□□□ -0.54
CAPNS1-202ENST00000586851 CCER1Q8TC90 406 aaPredicted RBP11.7□□□□□ -0.54
CAPNS1-202ENST00000586851 BAZ1BQ9UIG0 1483 aaKnown RBP11.68□□□□□ -0.54
CAPNS1-202ENST00000586851 UNC13AQ9UPW8 1703 aa11.67□□□□□ -0.54
CAPNS1-202ENST00000586851 CEP164Q9UPV0 1460 aa11.66□□□□□ -0.54
CAPNS1-202ENST00000586851 ACIN1Q9UKV3 1341 aaKnown RBP11.64□□□□□ -0.55
CAPNS1-202ENST00000586851 SCAF1Q9H7N4 1312 aaKnown RBP11.62□□□□□ -0.55
CAPNS1-202ENST00000586851 CSRNP3Q8WYN3 585 aa11.62□□□□□ -0.55
CAPNS1-202ENST00000586851 ABCC8Q09428 1581 aa11.61□□□□□ -0.55
CAPNS1-202ENST00000586851 CLSPNQ9HAW4 1339 aa11.6□□□□□ -0.55
CAPNS1-202ENST00000586851 DIEXFQ68CQ4 756 aaKnown RBP11.59□□□□□ -0.55
CAPNS1-202ENST00000586851 SENP3Q9H4L4 574 aaPredicted RBP11.58□□□□□ -0.56
CAPNS1-202ENST00000586851 PHF23Q9BUL5 403 aaPredicted RBP11.55□□□□□ -0.56
CAPNS1-202ENST00000586851 VPS8Q8N3P4 1428 aa11.53□□□□□ -0.56
CAPNS1-202ENST00000586851 ZNF316A6NFI3 1004 aaPredicted RBP11.53□□□□□ -0.56
CAPNS1-202ENST00000586851 ERICH3Q5RHP9 1530 aa11.52□□□□□ -0.57
CAPNS1-202ENST00000586851 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.52□□□□□ -0.57
CAPNS1-202ENST00000586851 SOGA1O94964 1423 aa11.52□□□□□ -0.57
CAPNS1-202ENST00000586851 CLIP1P30622 1438 aa11.49□□□□□ -0.57
CAPNS1-202ENST00000586851 BICRAQ9NZM4 1560 aa11.49□□□□□ -0.57
CAPNS1-202ENST00000586851 UBTFP17480 764 aaKnown RBP11.48□□□□□ -0.57
CAPNS1-202ENST00000586851 TOP2BQ02880 1626 aa11.47□□□□□ -0.57
CAPNS1-202ENST00000586851 BIVM-ERCC5R4GMW8 1640 aa11.47□□□□□ -0.57
CAPNS1-202ENST00000586851 SYNJ1O43426 1573 aa11.45□□□□□ -0.58
CAPNS1-202ENST00000586851 APLP2Q06481 763 aa11.45□□□□□ -0.58
CAPNS1-202ENST00000586851 NEUROD1Q13562 356 aa11.43□□□□□ -0.58
CAPNS1-202ENST00000586851 ATAD2BQ9ULI0 1458 aa11.43□□□□□ -0.58
CAPNS1-202ENST00000586851 HMGXB3Q12766 1538 aa11.4□□□□□ -0.59
CAPNS1-202ENST00000586851 GTF3C3Q9Y5Q9 886 aa11.39□□□□□ -0.59
CAPNS1-202ENST00000586851 RUSC2Q8N2Y8 1516 aa11.38□□□□□ -0.59
CAPNS1-202ENST00000586851 EHMT2Q96KQ7 1210 aa11.37□□□□□ -0.59
CAPNS1-202ENST00000586851 CUX2O14529 1486 aa11.36□□□□□ -0.59
CAPNS1-202ENST00000586851 PRXQ9BXM0 1461 aa11.35□□□□□ -0.59
CAPNS1-202ENST00000586851 MAP3K1Q13233 1512 aa11.35□□□□□ -0.59
CAPNS1-202ENST00000586851 PRDM2Q13029 1718 aa11.32□□□□□ -0.6
CAPNS1-202ENST00000586851 RAPGEF2Q9Y4G8 1499 aa11.32□□□□□ -0.6
CAPNS1-202ENST00000586851 RRBP1Q9P2E9 1410 aaKnown RBP11.31□□□□□ -0.6
CAPNS1-202ENST00000586851 KIF27Q86VH2 1401 aa11.29□□□□□ -0.6
CAPNS1-202ENST00000586851 NCAPD3P42695 1498 aa11.28□□□□□ -0.6
CAPNS1-202ENST00000586851 ARAP1Q96P48 1450 aa11.24□□□□□ -0.61
CAPNS1-202ENST00000586851 DHX57Q6P158 1386 aaKnown RBP11.23□□□□□ -0.61
CAPNS1-202ENST00000586851 TIMELESSQ9UNS1 1208 aa11.22□□□□□ -0.61
CAPNS1-202ENST00000586851 CFTRP13569 1480 aa11.2□□□□□ -0.62
CAPNS1-202ENST00000586851 HNRNPUL2Q1KMD3 747 aaKnown RBP11.19□□□□□ -0.62
CAPNS1-202ENST00000586851 CCNB3Q8WWL7 1395 aa11.18□□□□□ -0.62
CAPNS1-202ENST00000586851 MIER1Q8N108 512 aa11.18□□□□□ -0.62
CAPNS1-202ENST00000586851 FHAD1B1AJZ9 1412 aa11.17□□□□□ -0.62
CAPNS1-202ENST00000586851 CUX1P39880 1505 aa11.16□□□□□ -0.62
CAPNS1-202ENST00000586851 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.16□□□□□ -0.62
CAPNS1-202ENST00000586851 TIAM1Q13009 1591 aa11.15□□□□□ -0.62
CAPNS1-202ENST00000586851 CFAP43Q8NDM7 1665 aa11.14□□□□□ -0.63
CAPNS1-202ENST00000586851 TTBK1Q5TCY1 1321 aaPredicted RBP11.13□□□□□ -0.63
CAPNS1-202ENST00000586851 EFCAB5A4FU69 1503 aa11.13□□□□□ -0.63
CAPNS1-202ENST00000586851 ARHGAP35Q9NRY4 1499 aa11.12□□□□□ -0.63
CAPNS1-202ENST00000586851 PABPN1Q86U42 306 aaKnown RBP eCLIP11.11□□□□□ -0.63
CAPNS1-202ENST00000586851 AQRO60306 1485 aaKnown RBP eCLIP11.1□□□□□ -0.638e-9■□□□□ 10.5
CAPNS1-202ENST00000586851 CC2D2AQ9P2K1 1620 aa11.07□□□□□ -0.64
CAPNS1-202ENST00000586851 YTHDC1Q96MU7 727 aaKnown RBP11.07□□□□□ -0.64
CAPNS1-202ENST00000586851 SETD5Q9C0A6 1442 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms