RNA–Protein interactions for RNA: ENST00000586541.5

PRKAR1A-212, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

TSL 5

Gene PRKAR1A, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-212ENST00000586541 AEBP2Q6ZN18 517 aaPredicted RBP21.09■□□□□ 0.97
PRKAR1A-212ENST00000586541 CHIC1Q5VXU3 224 aa20.79■□□□□ 0.92
PRKAR1A-212ENST00000586541 PHF23Q9BUL5 403 aaPredicted RBP18.35■□□□□ 0.53
PRKAR1A-212ENST00000586541 SENP3Q9H4L4 574 aaPredicted RBP17.81■□□□□ 0.44
PRKAR1A-212ENST00000586541 PLPPR3Q6T4P5 718 aa16.98■□□□□ 0.31
PRKAR1A-212ENST00000586541 FOXD1Q16676 465 aa16.54■□□□□ 0.24
PRKAR1A-212ENST00000586541 ADRA2BP18089 450 aa16.13■□□□□ 0.17
PRKAR1A-212ENST00000586541 PPP6R1Q9UPN7 881 aa16.13■□□□□ 0.17
PRKAR1A-212ENST00000586541 PIAS4Q8N2W9 510 aaPredicted RBP15.65■□□□□ 0.1
PRKAR1A-212ENST00000586541 MSH5O43196 834 aa15.12■□□□□ 0.01
PRKAR1A-212ENST00000586541 PPP4R3CPQ6ZMV5 832 aa15.02■□□□□ -0
PRKAR1A-212ENST00000586541 KCNA4P22459 653 aa14.95□□□□□ -0.02
PRKAR1A-212ENST00000586541 SCAF1Q9H7N4 1312 aaKnown RBP14.69□□□□□ -0.06
PRKAR1A-212ENST00000586541 NCBP3Q53F19 620 aaKnown RBP14.66□□□□□ -0.06
PRKAR1A-212ENST00000586541 MAPK8IP2Q13387 824 aaPredicted RBP14.57□□□□□ -0.08
PRKAR1A-212ENST00000586541 CNKSR2Q8WXI2 1034 aa14.52□□□□□ -0.09
PRKAR1A-212ENST00000586541 NPM3O75607 178 aaKnown RBP14.48□□□□□ -0.09
PRKAR1A-212ENST00000586541 DMRT2Q9Y5R5 561 aa14.27□□□□□ -0.13
PRKAR1A-212ENST00000586541 SLC4A1APQ9BWU0 796 aaKnown RBP14.26□□□□□ -0.13
PRKAR1A-212ENST00000586541 RNF216Q9NWF9 866 aaPredicted RBP14.17□□□□□ -0.14
PRKAR1A-212ENST00000586541 EHMT2Q96KQ7 1210 aa14.15□□□□□ -0.14
PRKAR1A-212ENST00000586541 HOXD11P31277 338 aaPredicted RBP14.05□□□□□ -0.16
PRKAR1A-212ENST00000586541 DNAJC5BQ9UF47 199 aa13.95□□□□□ -0.18
PRKAR1A-212ENST00000586541 CSRNP3Q8WYN3 585 aa13.87□□□□□ -0.19
PRKAR1A-212ENST00000586541 ZBTB22O15209 634 aa13.76□□□□□ -0.21
PRKAR1A-212ENST00000586541 DCAF8L1A6NGE4 600 aa13.68□□□□□ -0.22
PRKAR1A-212ENST00000586541 FOXD4L1Q9NU39 408 aa13.66□□□□□ -0.22
PRKAR1A-212ENST00000586541 SLC4A2P04920 1241 aa13.62□□□□□ -0.23
PRKAR1A-212ENST00000586541 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.42□□□□□ -0.261e-11■□□□□ 9.1
PRKAR1A-212ENST00000586541 POTEDQ86YR6 584 aa13.39□□□□□ -0.27
PRKAR1A-212ENST00000586541 MYCNP04198 464 aaPredicted RBP13.34□□□□□ -0.27
PRKAR1A-212ENST00000586541 U3KPZ7 1027 aaPredicted RBP13.22□□□□□ -0.29
PRKAR1A-212ENST00000586541 ATXN8OSP0DMR3 200 aa13.14□□□□□ -0.31
PRKAR1A-212ENST00000586541 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.1□□□□□ -0.31
PRKAR1A-212ENST00000586541 HNRNPUL2Q1KMD3 747 aaKnown RBP13.1□□□□□ -0.31
PRKAR1A-212ENST00000586541 SAMD1Q6SPF0 538 aaPredicted RBP13.07□□□□□ -0.32
PRKAR1A-212ENST00000586541 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.33
PRKAR1A-212ENST00000586541 RNF39Q9H2S5 420 aa13□□□□□ -0.33
PRKAR1A-212ENST00000586541 NISCHQ9Y2I1 1504 aa12.95□□□□□ -0.34
PRKAR1A-212ENST00000586541 APLP2Q06481 763 aa12.9□□□□□ -0.34
PRKAR1A-212ENST00000586541 C1QBPQ07021 282 aaKnown RBP12.84□□□□□ -0.35
PRKAR1A-212ENST00000586541 SPINK5Q9NQ38 1064 aaPredicted RBP12.81□□□□□ -0.36
PRKAR1A-212ENST00000586541 ZNF219Q9P2Y4 722 aaPredicted RBP12.77□□□□□ -0.37
PRKAR1A-212ENST00000586541 TRHP20396 242 aaPredicted RBP12.75□□□□□ -0.37
PRKAR1A-212ENST00000586541 CAPN15O75808 1086 aa12.74□□□□□ -0.37
PRKAR1A-212ENST00000586541 POLA2Q14181 598 aa12.59□□□□□ -0.39
PRKAR1A-212ENST00000586541 ABCB7O75027 752 aa12.53□□□□□ -0.4
PRKAR1A-212ENST00000586541 FKBP8Q14318 412 aa12.53□□□□□ -0.4
PRKAR1A-212ENST00000586541 CACNB1Q02641 598 aaPredicted RBP12.51□□□□□ -0.41
PRKAR1A-212ENST00000586541 DSG3P32926 999 aa12.46□□□□□ -0.41
PRKAR1A-212ENST00000586541 MKRN4PQ13434 485 aaPredicted RBP12.45□□□□□ -0.42
PRKAR1A-212ENST00000586541 FBLN2P98095 1184 aa12.42□□□□□ -0.42
PRKAR1A-212ENST00000586541 ZBTB12Q9Y330 459 aaPredicted RBP12.33□□□□□ -0.44
PRKAR1A-212ENST00000586541 SPDYE4A6NLX3 237 aa12.28□□□□□ -0.44
PRKAR1A-212ENST00000586541 OSCARQ8IYS5 282 aa12.13□□□□□ -0.47
PRKAR1A-212ENST00000586541 PROM2Q8N271 834 aa12.07□□□□□ -0.48
PRKAR1A-212ENST00000586541 ZNF692Q9BU19 519 aaPredicted RBP12.07□□□□□ -0.48
PRKAR1A-212ENST00000586541 SPDYE2BA6NHP3 402 aa12.04□□□□□ -0.48
PRKAR1A-212ENST00000586541 SPDYE6P0CI01 402 aa12.04□□□□□ -0.48
PRKAR1A-212ENST00000586541 SPDYE2Q495Y8 402 aa12.04□□□□□ -0.48
PRKAR1A-212ENST00000586541 FBXO3Q9UK99 471 aa11.98□□□□□ -0.49
PRKAR1A-212ENST00000586541 SSUH2Q9Y2M2 353 aa11.98□□□□□ -0.49
PRKAR1A-212ENST00000586541 PABPN1Q86U42 306 aaKnown RBP eCLIP11.91□□□□□ -0.5
PRKAR1A-212ENST00000586541 RBM42Q9BTD8 480 aaKnown RBP11.83□□□□□ -0.52
PRKAR1A-212ENST00000586541 VASPP50552 380 aaPredicted RBP11.82□□□□□ -0.52
PRKAR1A-212ENST00000586541 RTN4Q9NQC3 1192 aaKnown RBP11.81□□□□□ -0.52
PRKAR1A-212ENST00000586541 CCDC180Q9P1Z9 1646 aa11.81□□□□□ -0.52
PRKAR1A-212ENST00000586541 AMER1Q5JTC6 1135 aaPredicted RBP11.79□□□□□ -0.52
PRKAR1A-212ENST00000586541 AKT1S1Q96B36 256 aa11.75□□□□□ -0.53
PRKAR1A-212ENST00000586541 STAG3Q9UJ98 1225 aa11.74□□□□□ -0.53
PRKAR1A-212ENST00000586541 IFNLR1Q8IU57 520 aaPredicted RBP11.71□□□□□ -0.53
PRKAR1A-212ENST00000586541 REM2Q8IYK8 340 aaPredicted RBP11.66□□□□□ -0.54
PRKAR1A-212ENST00000586541 MIER1Q8N108 512 aa11.64□□□□□ -0.55
PRKAR1A-212ENST00000586541 SPDYE1Q8NFV5 336 aaPredicted RBP11.64□□□□□ -0.55
PRKAR1A-212ENST00000586541 PLCD3Q8N3E9 789 aa11.63□□□□□ -0.55
PRKAR1A-212ENST00000586541 CLEC11AQ9Y240 323 aa11.61□□□□□ -0.55
PRKAR1A-212ENST00000586541 KLHL34Q8N239 644 aa11.6□□□□□ -0.55
PRKAR1A-212ENST00000586541 PRR29P0C7W0 189 aa11.53□□□□□ -0.56
PRKAR1A-212ENST00000586541 PITPNM1O00562 1244 aa11.52□□□□□ -0.57
PRKAR1A-212ENST00000586541 PLEKHG5O94827 1062 aa11.52□□□□□ -0.57
PRKAR1A-212ENST00000586541 SPOCK2Q92563 424 aa11.51□□□□□ -0.57
PRKAR1A-212ENST00000586541 ZBTB47Q9UFB7 747 aaPredicted RBP11.45□□□□□ -0.58
PRKAR1A-212ENST00000586541 CREBZFQ9NS37 354 aa11.44□□□□□ -0.58
PRKAR1A-212ENST00000586541 ABCC9O60706 1549 aa11.43□□□□□ -0.58
PRKAR1A-212ENST00000586541 PKD2Q13563 968 aa11.4□□□□□ -0.58
PRKAR1A-212ENST00000586541 MNX1P50219 401 aaPredicted RBP11.34□□□□□ -0.59
PRKAR1A-212ENST00000586541 CIZ1Q9ULV3 898 aaPredicted RBP11.32□□□□□ -0.6
PRKAR1A-212ENST00000586541 CHADLQ6NUI6 762 aa11.31□□□□□ -0.6
PRKAR1A-212ENST00000586541 NUBP1P53384 320 aa11.3□□□□□ -0.6
PRKAR1A-212ENST00000586541 ECM2O94769 699 aaPredicted RBP11.29□□□□□ -0.6
PRKAR1A-212ENST00000586541 CHRDL2Q6WN34 429 aa11.27□□□□□ -0.61
PRKAR1A-212ENST00000586541 FXR2P51116 673 aaKnown RBP eCLIP11.25□□□□□ -0.61
PRKAR1A-212ENST00000586541 PRKAR2AP13861 404 aaKnown RBP11.24□□□□□ -0.61
PRKAR1A-212ENST00000586541 DCAF8Q5TAQ9 597 aa11.24□□□□□ -0.61
PRKAR1A-212ENST00000586541 NPM1P06748 294 aaKnown RBP eCLIP11.23□□□□□ -0.61
PRKAR1A-212ENST00000586541 DCAF8L2P0C7V8 631 aa11.23□□□□□ -0.61
PRKAR1A-212ENST00000586541 GSE1Q14687 1217 aa11.21□□□□□ -0.61
PRKAR1A-212ENST00000586541 FARP1Q9Y4F1 1045 aaPredicted RBP11.21□□□□□ -0.61
PRKAR1A-212ENST00000586541 RASEFQ8IZ41 740 aa11.2□□□□□ -0.62
PRKAR1A-212ENST00000586541 PIP4P2Q8N4L2 257 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms