RNA–Protein interactions for RNA: ENST00000586316.5

PDCD5-205, Transcript of programmed cell death 5, humanhuman

TSL 2

Gene PDCD5, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-205ENST00000586316 AEBP2Q6ZN18 517 aaPredicted RBP23.44■■□□□ 1.34
PDCD5-205ENST00000586316 CHIC1Q5VXU3 224 aa22.39■■□□□ 1.17
PDCD5-205ENST00000586316 SENP3Q9H4L4 574 aaPredicted RBP20■□□□□ 0.79
PDCD5-205ENST00000586316 PHF23Q9BUL5 403 aaPredicted RBP19.7■□□□□ 0.74
PDCD5-205ENST00000586316 FOXD1Q16676 465 aa18.6■□□□□ 0.57
PDCD5-205ENST00000586316 PLPPR3Q6T4P5 718 aa17.93■□□□□ 0.46
PDCD5-205ENST00000586316 PPP6R1Q9UPN7 881 aa17.46■□□□□ 0.39
PDCD5-205ENST00000586316 PIAS4Q8N2W9 510 aaPredicted RBP17.41■□□□□ 0.38
PDCD5-205ENST00000586316 ADRA2BP18089 450 aa17.4■□□□□ 0.38
PDCD5-205ENST00000586316 MSH5O43196 834 aa17.39■□□□□ 0.37
PDCD5-205ENST00000586316 POTEDQ86YR6 584 aa16.75■□□□□ 0.27
PDCD5-205ENST00000586316 SCAF1Q9H7N4 1312 aaKnown RBP15.94■□□□□ 0.14
PDCD5-205ENST00000586316 MAPK8IP2Q13387 824 aaPredicted RBP15.92■□□□□ 0.14
PDCD5-205ENST00000586316 DMRT2Q9Y5R5 561 aa15.89■□□□□ 0.13
PDCD5-205ENST00000586316 PPP4R3CPQ6ZMV5 832 aa15.71■□□□□ 0.11
PDCD5-205ENST00000586316 CNKSR2Q8WXI2 1034 aa15.41■□□□□ 0.06
PDCD5-205ENST00000586316 HOXD11P31277 338 aaPredicted RBP15.35■□□□□ 0.05
PDCD5-205ENST00000586316 RNF216Q9NWF9 866 aaPredicted RBP15.25■□□□□ 0.03
PDCD5-205ENST00000586316 NCBP3Q53F19 620 aaKnown RBP15.15■□□□□ 0.02
PDCD5-205ENST00000586316 DCAF8L1A6NGE4 600 aa15.13■□□□□ 0.01
PDCD5-205ENST00000586316 NPM3O75607 178 aaKnown RBP14.94□□□□□ -0.02
PDCD5-205ENST00000586316 RNF39Q9H2S5 420 aa14.86□□□□□ -0.03
PDCD5-205ENST00000586316 DNAJC5BQ9UF47 199 aa14.84□□□□□ -0.03
PDCD5-205ENST00000586316 CACNB1Q02641 598 aaPredicted RBP14.79□□□□□ -0.04
PDCD5-205ENST00000586316 KCNA4P22459 653 aa14.75□□□□□ -0.05
PDCD5-205ENST00000586316 C1QBPQ07021 282 aaKnown RBP14.64□□□□□ -0.07
PDCD5-205ENST00000586316 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.56□□□□□ -0.08
PDCD5-205ENST00000586316 U3KPZ7 1027 aaPredicted RBP14.31□□□□□ -0.12
PDCD5-205ENST00000586316 SLC4A2P04920 1241 aa14.24□□□□□ -0.13
PDCD5-205ENST00000586316 SPINK5Q9NQ38 1064 aaPredicted RBP14.04□□□□□ -0.16
PDCD5-205ENST00000586316 CAPN15O75808 1086 aa13.99□□□□□ -0.17
PDCD5-205ENST00000586316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.95□□□□□ -0.18
PDCD5-205ENST00000586316 HNRNPUL2Q1KMD3 747 aaKnown RBP13.95□□□□□ -0.18
PDCD5-205ENST00000586316 APLP2Q06481 763 aa13.94□□□□□ -0.18
PDCD5-205ENST00000586316 SLC4A1APQ9BWU0 796 aaKnown RBP13.94□□□□□ -0.18
PDCD5-205ENST00000586316 DSG3P32926 999 aa13.93□□□□□ -0.18
PDCD5-205ENST00000586316 SAMD1Q6SPF0 538 aaPredicted RBP13.88□□□□□ -0.19
PDCD5-205ENST00000586316 MYCNP04198 464 aaPredicted RBP13.84□□□□□ -0.19
PDCD5-205ENST00000586316 ZNF219Q9P2Y4 722 aaPredicted RBP13.83□□□□□ -0.2
PDCD5-205ENST00000586316 TRHP20396 242 aaPredicted RBP13.78□□□□□ -0.2
PDCD5-205ENST00000586316 FOXD4L1Q9NU39 408 aa13.74□□□□□ -0.21
PDCD5-205ENST00000586316 ABCB7O75027 752 aa13.68□□□□□ -0.22
PDCD5-205ENST00000586316 ZBTB22O15209 634 aa13.59□□□□□ -0.23
PDCD5-205ENST00000586316 ATF5Q9Y2D1 282 aaPredicted RBP13.47□□□□□ -0.25
PDCD5-205ENST00000586316 POLA2Q14181 598 aa13.46□□□□□ -0.25
PDCD5-205ENST00000586316 ATXN8OSP0DMR3 200 aa13.34□□□□□ -0.27
PDCD5-205ENST00000586316 RBM42Q9BTD8 480 aaKnown RBP13.3□□□□□ -0.28
PDCD5-205ENST00000586316 ZBTB12Q9Y330 459 aaPredicted RBP13.27□□□□□ -0.29
PDCD5-205ENST00000586316 POTEHQ6S545 545 aa13.15□□□□□ -0.3
PDCD5-205ENST00000586316 OSCARQ8IYS5 282 aa13.06□□□□□ -0.32
PDCD5-205ENST00000586316 CSRNP3Q8WYN3 585 aa13.03□□□□□ -0.32
PDCD5-205ENST00000586316 AKT1S1Q96B36 256 aa13.01□□□□□ -0.33
PDCD5-205ENST00000586316 CHRDL2Q6WN34 429 aa12.95□□□□□ -0.34
PDCD5-205ENST00000586316 FBLN2P98095 1184 aa12.94□□□□□ -0.34
PDCD5-205ENST00000586316 EHMT2Q96KQ7 1210 aa12.9□□□□□ -0.34
PDCD5-205ENST00000586316 MKRN4PQ13434 485 aaPredicted RBP12.88□□□□□ -0.35
PDCD5-205ENST00000586316 REM2Q8IYK8 340 aaPredicted RBP12.87□□□□□ -0.35
PDCD5-205ENST00000586316 SPDYE2BA6NHP3 402 aa12.85□□□□□ -0.35
PDCD5-205ENST00000586316 SPDYE6P0CI01 402 aa12.85□□□□□ -0.35
PDCD5-205ENST00000586316 SPDYE2Q495Y8 402 aa12.85□□□□□ -0.35
PDCD5-205ENST00000586316 PITPNM1O00562 1244 aa12.75□□□□□ -0.37
PDCD5-205ENST00000586316 SSUH2Q9Y2M2 353 aa12.71□□□□□ -0.37
PDCD5-205ENST00000586316 PIP4P2Q8N4L2 257 aa12.67□□□□□ -0.38
PDCD5-205ENST00000586316 ZNF692Q9BU19 519 aaPredicted RBP12.66□□□□□ -0.38
PDCD5-205ENST00000586316 FXR2P51116 673 aaKnown RBP eCLIP12.62□□□□□ -0.39
PDCD5-205ENST00000586316 SPDYE1Q8NFV5 336 aaPredicted RBP12.58□□□□□ -0.4
PDCD5-205ENST00000586316 PABPN1Q86U42 306 aaKnown RBP eCLIP12.49□□□□□ -0.41
PDCD5-205ENST00000586316 CLEC11AQ9Y240 323 aa12.48□□□□□ -0.41
PDCD5-205ENST00000586316 PRKAR2AP13861 404 aaKnown RBP12.39□□□□□ -0.43
PDCD5-205ENST00000586316 SP7Q8TDD2 431 aaPredicted RBP12.39□□□□□ -0.43
PDCD5-205ENST00000586316 HAX1O00165 279 aa12.35□□□□□ -0.43
PDCD5-205ENST00000586316 PRR29P0C7W0 189 aa12.32□□□□□ -0.44
PDCD5-205ENST00000586316 SPDYE4A6NLX3 237 aa12.31□□□□□ -0.44
PDCD5-205ENST00000586316 CHADLQ6NUI6 762 aa12.25□□□□□ -0.45
PDCD5-205ENST00000586316 EVX2Q03828 476 aa12.22□□□□□ -0.45
PDCD5-205ENST00000586316 C19orf67A6NJJ6 358 aa12.21□□□□□ -0.45
PDCD5-205ENST00000586316 STAG3Q9UJ98 1225 aa12.19□□□□□ -0.46
PDCD5-205ENST00000586316 FARP1Q9Y4F1 1045 aaPredicted RBP12.12□□□□□ -0.47
PDCD5-205ENST00000586316 PROM2Q8N271 834 aa12.11□□□□□ -0.47
PDCD5-205ENST00000586316 CREBZFQ9NS37 354 aa12.08□□□□□ -0.48
PDCD5-205ENST00000586316 CD44P16070 742 aaKnown RBP12.02□□□□□ -0.49
PDCD5-205ENST00000586316 GABBR2O75899 941 aa11.96□□□□□ -0.49
PDCD5-205ENST00000586316 MNX1P50219 401 aaPredicted RBP11.91□□□□□ -0.5
PDCD5-205ENST00000586316 ZNF579Q8NAF0 562 aaKnown RBP11.89□□□□□ -0.51
PDCD5-205ENST00000586316 CLCN6P51797 869 aa11.87□□□□□ -0.51
PDCD5-205ENST00000586316 NPM1P06748 294 aaKnown RBP eCLIP11.85□□□□□ -0.51
PDCD5-205ENST00000586316 ZRANB1Q9UGI0 708 aa11.84□□□□□ -0.51
PDCD5-205ENST00000586316 PAK3O75914 559 aaPredicted RBP11.79□□□□□ -0.52
PDCD5-205ENST00000586316 FKBP8Q14318 412 aa11.79□□□□□ -0.52
PDCD5-205ENST00000586316 POTEIP0CG38 1075 aa11.73□□□□□ -0.53
PDCD5-205ENST00000586316 PHF12Q96QT6 1004 aa11.71□□□□□ -0.53
PDCD5-205ENST00000586316 PLEKHG5O94827 1062 aa11.7□□□□□ -0.54
PDCD5-205ENST00000586316 GALR2O43603 387 aaPredicted RBP11.68□□□□□ -0.54
PDCD5-205ENST00000586316 MIER1Q8N108 512 aa11.68□□□□□ -0.54
PDCD5-205ENST00000586316 DCBLD2Q96PD2 775 aa11.65□□□□□ -0.54
PDCD5-205ENST00000586316 PLCD3Q8N3E9 789 aa11.63□□□□□ -0.55
PDCD5-205ENST00000586316 CCDC61Q9Y6R9 512 aa11.61□□□□□ -0.55
PDCD5-205ENST00000586316 TSPYL2Q9H2G4 693 aaPredicted RBP11.6□□□□□ -0.55
PDCD5-205ENST00000586316 LHX8Q68G74 356 aa11.59□□□□□ -0.55
PDCD5-205ENST00000586316 RASEFQ8IZ41 740 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms