RNA–Protein interactions for RNA: ENST00000585828.5

ATP6V0A1-207, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 1 (best)

Gene ATP6V0A1, Length 2,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-207ENST00000585828 NISCHQ9Y2I1 1504 aa34.16■■■■□ 3.06
ATP6V0A1-207ENST00000585828 CCDC180Q9P1Z9 1646 aa29.57■■■□□ 2.32
ATP6V0A1-207ENST00000585828 ZCCHC6Q5VYS8 1495 aaKnown RBP28.83■■■□□ 2.21
ATP6V0A1-207ENST00000585828 DCAF1Q9Y4B6 1507 aa28.33■■■□□ 2.13
ATP6V0A1-207ENST00000585828 SHROOM4Q9ULL8 1493 aa28.07■■■□□ 2.08
ATP6V0A1-207ENST00000585828 MYO15BQ96JP2 1530 aa27.81■■■□□ 2.04
ATP6V0A1-207ENST00000585828 DCAF8L2P0C7V8 631 aa27.8■■■□□ 2.04
ATP6V0A1-207ENST00000585828 NACADO15069 1562 aa27.4■■□□□ 1.98
ATP6V0A1-207ENST00000585828 ABCC9O60706 1549 aa27.35■■□□□ 1.97
ATP6V0A1-207ENST00000585828 SUPT5HO00267 1087 aaKnown RBP27.26■■□□□ 1.96
ATP6V0A1-207ENST00000585828 SCRIBQ14160 1630 aa27.17■■□□□ 1.94
ATP6V0A1-207ENST00000585828 RB1CC1Q8TDY2 1594 aa27■■□□□ 1.91
ATP6V0A1-207ENST00000585828 RSF1Q96T23 1441 aaPredicted RBP26.7■■□□□ 1.86
ATP6V0A1-207ENST00000585828 UNC13AQ9UPW8 1703 aa26.52■■□□□ 1.84
ATP6V0A1-207ENST00000585828 CHIC1Q5VXU3 224 aa26.49■■□□□ 1.83
ATP6V0A1-207ENST00000585828 CECR2Q9BXF3 1484 aa26.47■■□□□ 1.83
ATP6V0A1-207ENST00000585828 MROH2BQ7Z745 1585 aa26.39■■□□□ 1.82
ATP6V0A1-207ENST00000585828 BAZ1AQ9NRL2 1556 aaPredicted RBP26.33■■□□□ 1.8
ATP6V0A1-207ENST00000585828 BICRAQ9NZM4 1560 aa26.23■■□□□ 1.79
ATP6V0A1-207ENST00000585828 WIZO95785 1651 aa26.19■■□□□ 1.78
ATP6V0A1-207ENST00000585828 SMARCA4P51532 1647 aa26.14■■□□□ 1.78
ATP6V0A1-207ENST00000585828 TOP2AP11388 1531 aaKnown RBP25.97■■□□□ 1.75
ATP6V0A1-207ENST00000585828 PABPN1Q86U42 306 aaKnown RBP eCLIP25.88■■□□□ 1.735e-7■□□□□ 10.9
ATP6V0A1-207ENST00000585828 PEG3Q9GZU2 1588 aa25.87■■□□□ 1.73
ATP6V0A1-207ENST00000585828 EIF4G1Q04637 1599 aaKnown RBP25.81■■□□□ 1.72
ATP6V0A1-207ENST00000585828 SMARCA2P51531 1590 aa25.74■■□□□ 1.71
ATP6V0A1-207ENST00000585828 CCDC88BA6NC98 1476 aa25.69■■□□□ 1.7
ATP6V0A1-207ENST00000585828 TRIM41Q8WV44 630 aa25.64■■□□□ 1.69
ATP6V0A1-207ENST00000585828 ATAD2BQ9ULI0 1458 aa25.58■■□□□ 1.69
ATP6V0A1-207ENST00000585828 LOC105371045A0A1W2PR82 267 aa25.43■■□□□ 1.66
ATP6V0A1-207ENST00000585828 BAZ1BQ9UIG0 1483 aaKnown RBP25.42■■□□□ 1.66
ATP6V0A1-207ENST00000585828 HMGXB3Q12766 1538 aa25.31■■□□□ 1.64
ATP6V0A1-207ENST00000585828 NCAPD3P42695 1498 aa25.3■■□□□ 1.64
ATP6V0A1-207ENST00000585828 ABCC8Q09428 1581 aa25.28■■□□□ 1.64
ATP6V0A1-207ENST00000585828 FAM9AQ8IZU1 332 aaPredicted RBP25.11■■□□□ 1.61
ATP6V0A1-207ENST00000585828 WRNQ14191 1432 aaPredicted RBP eCLIP25.08■■□□□ 1.6
ATP6V0A1-207ENST00000585828 HRCP23327 699 aa25.06■■□□□ 1.6
ATP6V0A1-207ENST00000585828 EEA1Q15075 1411 aa25.05■■□□□ 1.6
ATP6V0A1-207ENST00000585828 SYNJ1O43426 1573 aa24.98■■□□□ 1.59
ATP6V0A1-207ENST00000585828 SOGA1O94964 1423 aa24.93■■□□□ 1.58
ATP6V0A1-207ENST00000585828 CFTRP13569 1480 aa24.87■■□□□ 1.57
ATP6V0A1-207ENST00000585828 TOP2BQ02880 1626 aa24.86■■□□□ 1.57
ATP6V0A1-207ENST00000585828 BIVM-ERCC5R4GMW8 1640 aa24.84■■□□□ 1.57
ATP6V0A1-207ENST00000585828 CC2D2AQ9P2K1 1620 aa24.83■■□□□ 1.57
ATP6V0A1-207ENST00000585828 RUSC2Q8N2Y8 1516 aa24.81■■□□□ 1.56
ATP6V0A1-207ENST00000585828 PRDM2Q13029 1718 aa24.8■■□□□ 1.56
ATP6V0A1-207ENST00000585828 CSRNP3Q8WYN3 585 aa24.79■■□□□ 1.56
ATP6V0A1-207ENST00000585828 PCGF6Q9BYE7 350 aa24.79■■□□□ 1.56
ATP6V0A1-207ENST00000585828 TRIM26Q12899 539 aaPredicted RBP24.74■■□□□ 1.55
ATP6V0A1-207ENST00000585828 TNIKQ9UKE5 1360 aa24.74■■□□□ 1.55
ATP6V0A1-207ENST00000585828 DNAJC5BQ9UF47 199 aa24.72■■□□□ 1.55
ATP6V0A1-207ENST00000585828 KIF21BO75037 1637 aa24.7■■□□□ 1.54
ATP6V0A1-207ENST00000585828 GOLGA3Q08378 1498 aa24.68■■□□□ 1.54
ATP6V0A1-207ENST00000585828 EHMT2Q96KQ7 1210 aa24.65■■□□□ 1.54
ATP6V0A1-207ENST00000585828 CUX1P39880 1505 aa24.65■■□□□ 1.54
ATP6V0A1-207ENST00000585828 CADPSQ9ULU8 1353 aa24.65■■□□□ 1.54
ATP6V0A1-207ENST00000585828 CEP164Q9UPV0 1460 aa24.64■■□□□ 1.54
ATP6V0A1-207ENST00000585828 CEP162Q5TB80 1403 aa24.6■■□□□ 1.53
ATP6V0A1-207ENST00000585828 ERICH3Q5RHP9 1530 aa24.44■■□□□ 1.5
ATP6V0A1-207ENST00000585828 UBTFP17480 764 aaKnown RBP24.43■■□□□ 1.5
ATP6V0A1-207ENST00000585828 PRXQ9BXM0 1461 aa24.43■■□□□ 1.5
ATP6V0A1-207ENST00000585828 RAPGEF2Q9Y4G8 1499 aa24.41■■□□□ 1.5
ATP6V0A1-207ENST00000585828 KIF27Q86VH2 1401 aa24.39■■□□□ 1.5
ATP6V0A1-207ENST00000585828 FANCD2Q9BXW9 1451 aa24.36■■□□□ 1.49
ATP6V0A1-207ENST00000585828 LAMC3Q9Y6N6 1575 aa24.32■■□□□ 1.48
ATP6V0A1-207ENST00000585828 PPARGC1BQ86YN6 1023 aaKnown RBP24.29■■□□□ 1.48
ATP6V0A1-207ENST00000585828 CLIP1P30622 1438 aa24.28■■□□□ 1.48
ATP6V0A1-207ENST00000585828 FGD5Q6ZNL6 1462 aa24.27■■□□□ 1.48
ATP6V0A1-207ENST00000585828 DNMBPQ6XZF7 1577 aa24.27■■□□□ 1.48
ATP6V0A1-207ENST00000585828 NESP48681 1621 aa24.22■■□□□ 1.47
ATP6V0A1-207ENST00000585828 CUX2O14529 1486 aa24.19■■□□□ 1.46
ATP6V0A1-207ENST00000585828 VPS8Q8N3P4 1428 aa24.18■■□□□ 1.46
ATP6V0A1-207ENST00000585828 TOPBP1Q92547 1522 aa24.17■■□□□ 1.46
ATP6V0A1-207ENST00000585828 IGF1RP08069 1367 aa24.16■■□□□ 1.46
ATP6V0A1-207ENST00000585828 ABCA10Q8WWZ4 1543 aa24.12■■□□□ 1.45
ATP6V0A1-207ENST00000585828 POLA1P09884 1462 aaPredicted RBP24.1■■□□□ 1.45
ATP6V0A1-207ENST00000585828 PDS5BQ9NTI5 1447 aa24.08■■□□□ 1.45
ATP6V0A1-207ENST00000585828 URB2Q14146 1524 aaKnown RBP24.05■■□□□ 1.44
ATP6V0A1-207ENST00000585828 ZEB1P37275 1124 aaPredicted RBP24.04■■□□□ 1.44
ATP6V0A1-207ENST00000585828 ARAP1Q96P48 1450 aa24.02■■□□□ 1.44
ATP6V0A1-207ENST00000585828 CARMIL1Q5VZK9 1371 aa24.01■■□□□ 1.43
ATP6V0A1-207ENST00000585828 WDR97A6NE52 1622 aa24.01■■□□□ 1.43
ATP6V0A1-207ENST00000585828 RAD54L2Q9Y4B4 1467 aa23.99■■□□□ 1.43
ATP6V0A1-207ENST00000585828 KIF21AQ7Z4S6 1674 aa23.95■■□□□ 1.43
ATP6V0A1-207ENST00000585828 CUL7Q14999 1698 aa23.93■■□□□ 1.42
ATP6V0A1-207ENST00000585828 ARHGAP35Q9NRY4 1499 aa23.92■■□□□ 1.42
ATP6V0A1-207ENST00000585828 ABCA5Q8WWZ7 1642 aa23.88■■□□□ 1.41
ATP6V0A1-207ENST00000585828 APLP2Q06481 763 aa23.81■■□□□ 1.4
ATP6V0A1-207ENST00000585828 TARBP1Q13395 1621 aaKnown RBP23.8■■□□□ 1.4
ATP6V0A1-207ENST00000585828 RANGAP1P46060 587 aaPredicted RBP23.78■■□□□ 1.4
ATP6V0A1-207ENST00000585828 TTBK1Q5TCY1 1321 aaPredicted RBP23.76■■□□□ 1.39
ATP6V0A1-207ENST00000585828 MRC2Q9UBG0 1479 aa23.75■■□□□ 1.39
ATP6V0A1-207ENST00000585828 GAPVD1Q14C86 1478 aa23.75■■□□□ 1.39
ATP6V0A1-207ENST00000585828 MAP3K1Q13233 1512 aa23.74■■□□□ 1.39
ATP6V0A1-207ENST00000585828 CTTNBP2Q8WZ74 1663 aa23.73■■□□□ 1.39
ATP6V0A1-207ENST00000585828 EFCAB5A4FU69 1503 aa23.71■■□□□ 1.39
ATP6V0A1-207ENST00000585828 TDRD9Q8NDG6 1382 aaKnown RBP23.68■■□□□ 1.38
ATP6V0A1-207ENST00000585828 WDR62O43379 1518 aa23.65■■□□□ 1.38
ATP6V0A1-207ENST00000585828 FHAD1B1AJZ9 1412 aa23.64■■□□□ 1.38
ATP6V0A1-207ENST00000585828 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.62■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms