RNA–Protein interactions for RNA: ENST00000584089.1

SKA2-210, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 4

Gene SKA2, Length 229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-210ENST00000584089 AEBP2Q6ZN18 517 aaPredicted RBP21.14■□□□□ 0.97
SKA2-210ENST00000584089 CHIC1Q5VXU3 224 aa20.71■□□□□ 0.91
SKA2-210ENST00000584089 PHF23Q9BUL5 403 aaPredicted RBP18.19■□□□□ 0.5
SKA2-210ENST00000584089 SENP3Q9H4L4 574 aaPredicted RBP17.98■□□□□ 0.47
SKA2-210ENST00000584089 PLPPR3Q6T4P5 718 aa16.85■□□□□ 0.29
SKA2-210ENST00000584089 FOXD1Q16676 465 aa16.65■□□□□ 0.26
SKA2-210ENST00000584089 PPP6R1Q9UPN7 881 aa16.03■□□□□ 0.16
SKA2-210ENST00000584089 ADRA2BP18089 450 aa16.02■□□□□ 0.16
SKA2-210ENST00000584089 PIAS4Q8N2W9 510 aaPredicted RBP15.7■□□□□ 0.1
SKA2-210ENST00000584089 MSH5O43196 834 aa15.37■□□□□ 0.05
SKA2-210ENST00000584089 PPP4R3CPQ6ZMV5 832 aa14.83□□□□□ -0.04
SKA2-210ENST00000584089 SCAF1Q9H7N4 1312 aaKnown RBP14.72□□□□□ -0.05
SKA2-210ENST00000584089 KCNA4P22459 653 aa14.52□□□□□ -0.09
SKA2-210ENST00000584089 MAPK8IP2Q13387 824 aaPredicted RBP14.52□□□□□ -0.09
SKA2-210ENST00000584089 NCBP3Q53F19 620 aaKnown RBP14.49□□□□□ -0.09
SKA2-210ENST00000584089 CNKSR2Q8WXI2 1034 aa14.43□□□□□ -0.1
SKA2-210ENST00000584089 DMRT2Q9Y5R5 561 aa14.35□□□□□ -0.11
SKA2-210ENST00000584089 POTEDQ86YR6 584 aa14.31□□□□□ -0.12
SKA2-210ENST00000584089 NPM3O75607 178 aaKnown RBP14.24□□□□□ -0.13
SKA2-210ENST00000584089 RNF216Q9NWF9 866 aaPredicted RBP14.13□□□□□ -0.15
SKA2-210ENST00000584089 HOXD11P31277 338 aaPredicted RBP14.07□□□□□ -0.16
SKA2-210ENST00000584089 DNAJC5BQ9UF47 199 aa13.88□□□□□ -0.19
SKA2-210ENST00000584089 SLC4A1APQ9BWU0 796 aaKnown RBP13.84□□□□□ -0.19
SKA2-210ENST00000584089 DCAF8L1A6NGE4 600 aa13.69□□□□□ -0.22
SKA2-210ENST00000584089 EHMT2Q96KQ7 1210 aa13.45□□□□□ -0.26
SKA2-210ENST00000584089 SLC4A2P04920 1241 aa13.43□□□□□ -0.26
SKA2-210ENST00000584089 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.4□□□□□ -0.26
SKA2-210ENST00000584089 FOXD4L1Q9NU39 408 aa13.37□□□□□ -0.27
SKA2-210ENST00000584089 ZBTB22O15209 634 aa13.34□□□□□ -0.27
SKA2-210ENST00000584089 CSRNP3Q8WYN3 585 aa13.32□□□□□ -0.28
SKA2-210ENST00000584089 MYCNP04198 464 aaPredicted RBP13.18□□□□□ -0.3
SKA2-210ENST00000584089 U3KPZ7 1027 aaPredicted RBP13.17□□□□□ -0.3
SKA2-210ENST00000584089 RNF39Q9H2S5 420 aa13.16□□□□□ -0.3
SKA2-210ENST00000584089 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.07□□□□□ -0.32
SKA2-210ENST00000584089 HNRNPUL2Q1KMD3 747 aaKnown RBP13.07□□□□□ -0.32
SKA2-210ENST00000584089 C1QBPQ07021 282 aaKnown RBP13.03□□□□□ -0.32
SKA2-210ENST00000584089 SAMD1Q6SPF0 538 aaPredicted RBP13.02□□□□□ -0.33
SKA2-210ENST00000584089 ATXN8OSP0DMR3 200 aa12.94□□□□□ -0.34
SKA2-210ENST00000584089 APLP2Q06481 763 aa12.93□□□□□ -0.34
SKA2-210ENST00000584089 CACNB1Q02641 598 aaPredicted RBP12.78□□□□□ -0.36
SKA2-210ENST00000584089 SPINK5Q9NQ38 1064 aaPredicted RBP12.78□□□□□ -0.36
SKA2-210ENST00000584089 ATF5Q9Y2D1 282 aaPredicted RBP12.78□□□□□ -0.36
SKA2-210ENST00000584089 CAPN15O75808 1086 aa12.74□□□□□ -0.37
SKA2-210ENST00000584089 ZNF219Q9P2Y4 722 aaPredicted RBP12.72□□□□□ -0.37
SKA2-210ENST00000584089 TRHP20396 242 aaPredicted RBP12.68□□□□□ -0.38
SKA2-210ENST00000584089 DSG3P32926 999 aa12.53□□□□□ -0.4
SKA2-210ENST00000584089 POLA2Q14181 598 aa12.5□□□□□ -0.41
SKA2-210ENST00000584089 ABCB7O75027 752 aa12.47□□□□□ -0.41
SKA2-210ENST00000584089 ZBTB12Q9Y330 459 aaPredicted RBP12.34□□□□□ -0.43
SKA2-210ENST00000584089 FBLN2P98095 1184 aa12.29□□□□□ -0.44
SKA2-210ENST00000584089 MKRN4PQ13434 485 aaPredicted RBP12.24□□□□□ -0.45
SKA2-210ENST00000584089 OSCARQ8IYS5 282 aa12.06□□□□□ -0.48
SKA2-210ENST00000584089 FKBP8Q14318 412 aa12.03□□□□□ -0.48
SKA2-210ENST00000584089 SPDYE4A6NLX3 237 aa12□□□□□ -0.49
SKA2-210ENST00000584089 SPDYE2BA6NHP3 402 aa11.99□□□□□ -0.49
SKA2-210ENST00000584089 SPDYE6P0CI01 402 aa11.99□□□□□ -0.49
SKA2-210ENST00000584089 SPDYE2Q495Y8 402 aa11.99□□□□□ -0.49
SKA2-210ENST00000584089 RBM42Q9BTD8 480 aaKnown RBP11.97□□□□□ -0.49
SKA2-210ENST00000584089 ZNF692Q9BU19 519 aaPredicted RBP11.94□□□□□ -0.5
SKA2-210ENST00000584089 SSUH2Q9Y2M2 353 aa11.9□□□□□ -0.5
SKA2-210ENST00000584089 AKT1S1Q96B36 256 aa11.83□□□□□ -0.52
SKA2-210ENST00000584089 PROM2Q8N271 834 aa11.82□□□□□ -0.52
SKA2-210ENST00000584089 PABPN1Q86U42 306 aaKnown RBP eCLIP11.77□□□□□ -0.53
SKA2-210ENST00000584089 REM2Q8IYK8 340 aaPredicted RBP11.69□□□□□ -0.54
SKA2-210ENST00000584089 FBXO3Q9UK99 471 aa11.64□□□□□ -0.55
SKA2-210ENST00000584089 SPDYE1Q8NFV5 336 aaPredicted RBP11.63□□□□□ -0.55
SKA2-210ENST00000584089 STAG3Q9UJ98 1225 aa11.62□□□□□ -0.55
SKA2-210ENST00000584089 PITPNM1O00562 1244 aa11.54□□□□□ -0.56
SKA2-210ENST00000584089 CLEC11AQ9Y240 323 aa11.54□□□□□ -0.56
SKA2-210ENST00000584089 PRR29P0C7W0 189 aa11.46□□□□□ -0.57
SKA2-210ENST00000584089 VASPP50552 380 aaPredicted RBP11.45□□□□□ -0.58
SKA2-210ENST00000584089 CHRDL2Q6WN34 429 aa11.42□□□□□ -0.58
SKA2-210ENST00000584089 MIER1Q8N108 512 aa11.37□□□□□ -0.59
SKA2-210ENST00000584089 PLCD3Q8N3E9 789 aa11.36□□□□□ -0.59
SKA2-210ENST00000584089 PLEKHG5O94827 1062 aa11.34□□□□□ -0.59
SKA2-210ENST00000584089 FXR2P51116 673 aaKnown RBP eCLIP11.34□□□□□ -0.59
SKA2-210ENST00000584089 CREBZFQ9NS37 354 aa11.32□□□□□ -0.6
SKA2-210ENST00000584089 IFNLR1Q8IU57 520 aaPredicted RBP11.29□□□□□ -0.6
SKA2-210ENST00000584089 PIP4P2Q8N4L2 257 aa11.29□□□□□ -0.6
SKA2-210ENST00000584089 PRKAR2AP13861 404 aaKnown RBP11.26□□□□□ -0.61
SKA2-210ENST00000584089 ZBTB47Q9UFB7 747 aaPredicted RBP11.26□□□□□ -0.61
SKA2-210ENST00000584089 KLHL34Q8N239 644 aa11.25□□□□□ -0.61
SKA2-210ENST00000584089 CHADLQ6NUI6 762 aa11.24□□□□□ -0.61
SKA2-210ENST00000584089 MNX1P50219 401 aaPredicted RBP11.21□□□□□ -0.61
SKA2-210ENST00000584089 POTEHQ6S545 545 aa11.2□□□□□ -0.62
SKA2-210ENST00000584089 NPM1P06748 294 aaKnown RBP eCLIP11.17□□□□□ -0.62
SKA2-210ENST00000584089 SPOCK2Q92563 424 aa11.17□□□□□ -0.62
SKA2-210ENST00000584089 FARP1Q9Y4F1 1045 aaPredicted RBP11.17□□□□□ -0.62
SKA2-210ENST00000584089 NUBP1P53384 320 aa11.08□□□□□ -0.64
SKA2-210ENST00000584089 AMER1Q5JTC6 1135 aaPredicted RBP11.06□□□□□ -0.64
SKA2-210ENST00000584089 RASEFQ8IZ41 740 aa11.01□□□□□ -0.65
SKA2-210ENST00000584089 FAM212AQ96EL1 285 aa11□□□□□ -0.65
SKA2-210ENST00000584089 GSE1Q14687 1217 aa10.99□□□□□ -0.65
SKA2-210ENST00000584089 RTN4Q9NQC3 1192 aaKnown RBP10.98□□□□□ -0.65
SKA2-210ENST00000584089 DCAF8Q5TAQ9 597 aa10.97□□□□□ -0.65
SKA2-210ENST00000584089 CIZ1Q9ULV3 898 aaPredicted RBP10.96□□□□□ -0.65
SKA2-210ENST00000584089 C19orf67A6NJJ6 358 aa10.95□□□□□ -0.66
SKA2-210ENST00000584089 PAK3O75914 559 aaPredicted RBP10.95□□□□□ -0.66
SKA2-210ENST00000584089 CD44P16070 742 aaKnown RBP10.94□□□□□ -0.66
SKA2-210ENST00000584089 TSPYL2Q9H2G4 693 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms