RNA–Protein interactions for RNA: ENST00000583756.1

LINC01899-202, Transcript of long intergenic non-protein coding RNA 1899, humanhuman

TSL 3 BASIC

Gene LINC01899, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01899-202ENST00000583756 AEBP2Q6ZN18 517 aaPredicted RBP28.29■■■□□ 2.12
LINC01899-202ENST00000583756 CHIC1Q5VXU3 224 aa27.01■■□□□ 1.91
LINC01899-202ENST00000583756 SENP3Q9H4L4 574 aaPredicted RBP24.23■■□□□ 1.47
LINC01899-202ENST00000583756 PHF23Q9BUL5 403 aaPredicted RBP23.86■■□□□ 1.41
LINC01899-202ENST00000583756 FOXD1Q16676 465 aa22.5■■□□□ 1.19
LINC01899-202ENST00000583756 POTEDQ86YR6 584 aa22.17■■□□□ 1.14
LINC01899-202ENST00000583756 PLPPR3Q6T4P5 718 aa21.64■■□□□ 1.05
LINC01899-202ENST00000583756 MSH5O43196 834 aa21.12■□□□□ 0.97
LINC01899-202ENST00000583756 PPP6R1Q9UPN7 881 aa21.05■□□□□ 0.96
LINC01899-202ENST00000583756 PIAS4Q8N2W9 510 aaPredicted RBP21.04■□□□□ 0.96
LINC01899-202ENST00000583756 ADRA2BP18089 450 aa20.98■□□□□ 0.95
LINC01899-202ENST00000583756 SCAF1Q9H7N4 1312 aaKnown RBP19.34■□□□□ 0.69
LINC01899-202ENST00000583756 MAPK8IP2Q13387 824 aaPredicted RBP19.22■□□□□ 0.67
LINC01899-202ENST00000583756 DMRT2Q9Y5R5 561 aa19.22■□□□□ 0.67
LINC01899-202ENST00000583756 PPP4R3CPQ6ZMV5 832 aa18.93■□□□□ 0.62
LINC01899-202ENST00000583756 CNKSR2Q8WXI2 1034 aa18.61■□□□□ 0.57
LINC01899-202ENST00000583756 HOXD11P31277 338 aaPredicted RBP18.56■□□□□ 0.56
LINC01899-202ENST00000583756 CACNB1Q02641 598 aaPredicted RBP18.44■□□□□ 0.54
LINC01899-202ENST00000583756 RNF216Q9NWF9 866 aaPredicted RBP18.44■□□□□ 0.54
LINC01899-202ENST00000583756 DCAF8L1A6NGE4 600 aa18.29■□□□□ 0.52
LINC01899-202ENST00000583756 NCBP3Q53F19 620 aaKnown RBP18.29■□□□□ 0.52
LINC01899-202ENST00000583756 DNAJC5BQ9UF47 199 aa18.03■□□□□ 0.48
LINC01899-202ENST00000583756 RNF39Q9H2S5 420 aa17.99■□□□□ 0.47
LINC01899-202ENST00000583756 NPM3O75607 178 aaKnown RBP17.95■□□□□ 0.46
LINC01899-202ENST00000583756 C1QBPQ07021 282 aaKnown RBP17.79■□□□□ 0.44
LINC01899-202ENST00000583756 KCNA4P22459 653 aa17.63■□□□□ 0.41
LINC01899-202ENST00000583756 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.61■□□□□ 0.41
LINC01899-202ENST00000583756 U3KPZ7 1027 aaPredicted RBP17.25■□□□□ 0.35
LINC01899-202ENST00000583756 POTEHQ6S545 545 aa17.15■□□□□ 0.34
LINC01899-202ENST00000583756 SLC4A2P04920 1241 aa17.12■□□□□ 0.33
LINC01899-202ENST00000583756 SPINK5Q9NQ38 1064 aaPredicted RBP16.93■□□□□ 0.3
LINC01899-202ENST00000583756 CAPN15O75808 1086 aa16.92■□□□□ 0.3
LINC01899-202ENST00000583756 APLP2Q06481 763 aa16.91■□□□□ 0.3
LINC01899-202ENST00000583756 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.89■□□□□ 0.29
LINC01899-202ENST00000583756 HNRNPUL2Q1KMD3 747 aaKnown RBP16.89■□□□□ 0.29
LINC01899-202ENST00000583756 DSG3P32926 999 aa16.85■□□□□ 0.29
LINC01899-202ENST00000583756 SAMD1Q6SPF0 538 aaPredicted RBP16.77■□□□□ 0.28
LINC01899-202ENST00000583756 ZNF219Q9P2Y4 722 aaPredicted RBP16.73■□□□□ 0.27
LINC01899-202ENST00000583756 SLC4A1APQ9BWU0 796 aaKnown RBP16.69■□□□□ 0.26
LINC01899-202ENST00000583756 MYCNP04198 464 aaPredicted RBP16.65■□□□□ 0.26
LINC01899-202ENST00000583756 TRHP20396 242 aaPredicted RBP16.64■□□□□ 0.25
LINC01899-202ENST00000583756 FOXD4L1Q9NU39 408 aa16.5■□□□□ 0.23
LINC01899-202ENST00000583756 ABCB7O75027 752 aa16.48■□□□□ 0.23
LINC01899-202ENST00000583756 POLA2Q14181 598 aa16.26■□□□□ 0.19
LINC01899-202ENST00000583756 ZBTB22O15209 634 aa16.19■□□□□ 0.18
LINC01899-202ENST00000583756 RBM42Q9BTD8 480 aaKnown RBP16.15■□□□□ 0.18
LINC01899-202ENST00000583756 ATF5Q9Y2D1 282 aaPredicted RBP16.15■□□□□ 0.18
LINC01899-202ENST00000583756 ATXN8OSP0DMR3 200 aa16.07■□□□□ 0.16
LINC01899-202ENST00000583756 ZBTB12Q9Y330 459 aaPredicted RBP16.04■□□□□ 0.16
LINC01899-202ENST00000583756 AKT1S1Q96B36 256 aa15.78■□□□□ 0.12
LINC01899-202ENST00000583756 CHRDL2Q6WN34 429 aa15.7■□□□□ 0.1
LINC01899-202ENST00000583756 OSCARQ8IYS5 282 aa15.7■□□□□ 0.1
LINC01899-202ENST00000583756 FBLN2P98095 1184 aa15.63■□□□□ 0.09
LINC01899-202ENST00000583756 REM2Q8IYK8 340 aaPredicted RBP15.57■□□□□ 0.08
LINC01899-202ENST00000583756 CSRNP3Q8WYN3 585 aa15.54■□□□□ 0.08
LINC01899-202ENST00000583756 SP7Q8TDD2 431 aaPredicted RBP15.53■□□□□ 0.08
LINC01899-202ENST00000583756 SPDYE2BA6NHP3 402 aa15.52■□□□□ 0.08
LINC01899-202ENST00000583756 SPDYE6P0CI01 402 aa15.52■□□□□ 0.08
LINC01899-202ENST00000583756 SPDYE2Q495Y8 402 aa15.52■□□□□ 0.08
LINC01899-202ENST00000583756 MKRN4PQ13434 485 aaPredicted RBP15.45■□□□□ 0.06
LINC01899-202ENST00000583756 PITPNM1O00562 1244 aa15.38■□□□□ 0.05
LINC01899-202ENST00000583756 PIP4P2Q8N4L2 257 aa15.32■□□□□ 0.04
LINC01899-202ENST00000583756 SSUH2Q9Y2M2 353 aa15.3■□□□□ 0.04
LINC01899-202ENST00000583756 FXR2P51116 673 aaKnown RBP eCLIP15.29■□□□□ 0.04
LINC01899-202ENST00000583756 EHMT2Q96KQ7 1210 aa15.28■□□□□ 0.04
LINC01899-202ENST00000583756 ZNF692Q9BU19 519 aaPredicted RBP15.28■□□□□ 0.04
LINC01899-202ENST00000583756 SPDYE1Q8NFV5 336 aaPredicted RBP15.22■□□□□ 0.03
LINC01899-202ENST00000583756 CLEC11AQ9Y240 323 aa15.09■□□□□ 0.01
LINC01899-202ENST00000583756 PABPN1Q86U42 306 aaKnown RBP eCLIP15.04■□□□□ -0
LINC01899-202ENST00000583756 HAX1O00165 279 aa15.01□□□□□ -0.01
LINC01899-202ENST00000583756 PRKAR2AP13861 404 aaKnown RBP14.98□□□□□ -0.01
LINC01899-202ENST00000583756 PRR29P0C7W0 189 aa14.91□□□□□ -0.02
LINC01899-202ENST00000583756 C19orf67A6NJJ6 358 aa14.79□□□□□ -0.04
LINC01899-202ENST00000583756 EVX2Q03828 476 aa14.79□□□□□ -0.04
LINC01899-202ENST00000583756 SPDYE4A6NLX3 237 aa14.78□□□□□ -0.04
LINC01899-202ENST00000583756 CHADLQ6NUI6 762 aa14.76□□□□□ -0.05
LINC01899-202ENST00000583756 STAG3Q9UJ98 1225 aa14.75□□□□□ -0.05
LINC01899-202ENST00000583756 FARP1Q9Y4F1 1045 aaPredicted RBP14.65□□□□□ -0.06
LINC01899-202ENST00000583756 PLSCR2Q9NRY7 297 aa14.58□□□□□ -0.08
LINC01899-202ENST00000583756 CREBZFQ9NS37 354 aa14.55□□□□□ -0.08
LINC01899-202ENST00000583756 LHX8Q68G74 356 aa14.54□□□□□ -0.08
LINC01899-202ENST00000583756 GABBR2O75899 941 aa14.52□□□□□ -0.09
LINC01899-202ENST00000583756 CD44P16070 742 aaKnown RBP14.52□□□□□ -0.09
LINC01899-202ENST00000583756 PROM2Q8N271 834 aa14.51□□□□□ -0.09
LINC01899-202ENST00000583756 CLCN6P51797 869 aa14.49□□□□□ -0.09
LINC01899-202ENST00000583756 ZNF579Q8NAF0 562 aaKnown RBP14.36□□□□□ -0.11
LINC01899-202ENST00000583756 NPM1P06748 294 aaKnown RBP eCLIP14.34□□□□□ -0.11
LINC01899-202ENST00000583756 MNX1P50219 401 aaPredicted RBP14.32□□□□□ -0.12
LINC01899-202ENST00000583756 ZRANB1Q9UGI0 708 aa14.32□□□□□ -0.12
LINC01899-202ENST00000583756 PAK3O75914 559 aaPredicted RBP14.27□□□□□ -0.13
LINC01899-202ENST00000583756 POTEIP0CG38 1075 aa14.18□□□□□ -0.14
LINC01899-202ENST00000583756 DCBLD2Q96PD2 775 aa14.16□□□□□ -0.14
LINC01899-202ENST00000583756 PLEKHG5O94827 1062 aa14.14□□□□□ -0.15
LINC01899-202ENST00000583756 GALR2O43603 387 aaPredicted RBP14.09□□□□□ -0.15
LINC01899-202ENST00000583756 PHF12Q96QT6 1004 aa14.09□□□□□ -0.15
LINC01899-202ENST00000583756 MIER1Q8N108 512 aa14.08□□□□□ -0.16
LINC01899-202ENST00000583756 FKBP8Q14318 412 aa14.06□□□□□ -0.16
LINC01899-202ENST00000583756 ZBTB47Q9UFB7 747 aaPredicted RBP13.98□□□□□ -0.17
LINC01899-202ENST00000583756 CCDC61Q9Y6R9 512 aa13.98□□□□□ -0.17
LINC01899-202ENST00000583756 PLCD3Q8N3E9 789 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms